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Stack assures the correct smoothing for the scale introduced by the
2009-08-31
S
t
ephan Saa
l
feld
S
t
ack assures the correct
smo
o
thing for the scale in
t
roduce
d
.
.
.
commit
|
commitdiff
|
tree
2009-08-31
Stephan Saalfeld
AffineTransformMode n
o
tifies all af
f
ected Displ
a
yables
.
.
.
commit
|
commitdiff
|
tree
2009-08-31
Stephan Saalfel
d
* Fix
e
d
bou
n
ding box es
t
imation
commit
|
commitdiff
|
tree
2009-08-30
Ste
p
han Saalfeld
*
r
emove
d
non-required methods from
p
atch
commit
|
commitdiff
|
tree
2009-08-30
Stephan Saalfeld
consis
t
ently i
m
plemen
t
ed invertible coordinatetra
n
sfo
r
ms
.
.
.
commit
|
commitdiff
|
tree
2009-08-30
Stephan Saalfeld
A
d
ded Invert
i
bleC
o
ordina
t
eTransfor
m
List
commit
|
commitdiff
|
tree
2009-08-30
S
tephan Saalfeld
In
v
ertibleCoordina
t
eTransform implem
e
nts Co
o
rdi
n
ateTr
a
n
s
form
.
.
.
commit
|
commitdiff
|
tree
2009-08-30
Stephan Saalfeld
proper type CoordinateTransformList
.
clone()
commit
|
commitdiff
|
tree
2009-08-06
Stephan S
a
a
l
f
eld
Fi
x
Bug 71
commit
|
commitdiff
|
tree
2009-07-06
S
tep
h
an
Saalfel
d
Me
r
ge
b
ran
c
h
'
master' of ssh://sa
a
lfel
d
@re
p
o
.
or
.
c
z
.
.
.
commit
|
commitdiff
|
tree
2009-07-06
S
t
ephan Saalfeld
Merge b
r
anch
'master' into
i
terating-lensco
r
re
c
tion
commit
|
commitdiff
|
tree
2009-07-06
Steph
a
n Saalfeld
F
ixed th
e
i
t
eration in
l
ens-corr
e
ction s
u
ch that the
.
.
.
commit
|
commitdiff
|
tree
2009-07-06
Step
h
an S
a
a
lfeld
Imple
m
eted
itera
t
in
g
le
n
s-c
o
rrecti
o
n
a
s des
c
r
ibe
d
in
.
.
.
commit
|
commitdiff
|
tree
2009-07-06
S
t
epha
n
Saalfeld
T
r
a
n
sformMeshMapp
i
ng
s
ets InterpolationMethod (tracking
.
.
.
commit
|
commitdiff
|
tree
2009-06-29
Stephan S
a
alf
e
ld
M
e
r
ge branch 'paintables'
commit
|
commitdiff
|
tree
2009-06-29
Stephan
S
aalfeld
Di
s
tortio
n
CorrectionT
a
sk fi
n
ally d
o
es the all to all
commit
|
commitdiff
|
tree
2009-06-29
St
e
p
h
a
n Saalf
e
ld
Abstrac
t
Affine
T
ile2
D
can id
e
ntify t
h
e common Po
i
nt
M
atches
.
.
.
commit
|
commitdiff
|
tree
2009-06-29
S
t
e
phan Saalfeld
Fixed transformmeshmapping
.
j
s
test to conform with
.
.
.
commit
|
commitdiff
|
tree
2009-06-26
Stephan Saalfeld
A
n
ot
s
o impor
t
ant im
p
rovement of
how point correspondences
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
St
e
p
han
S
aalfel
d
F
ixed ac
c
identiall
y
inverted
aff
i
ne concatenation
.
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
S
t
ephan S
a
alfeld
Merg
e
branch 'pain
t
ables' of ssh://saa
l
f
e
ld@repo
.
o
r
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Stephan
S
aalfeld
Apply in NonLinearTransformM
o
de works
.
It was tested
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
S
t
ephan S
a
al
f
eld
Fixed XML
p
arsin
g
of CoordinateTran
s
fo
r
mLists
.
Th
e
y
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
S
tepha
n
S
aalfeld
A
d
ded T
r
akEM2 extension of Af
f
ineMode
l
2D
commit
|
commitdiff
|
tree
2009-06-25
S
tephan
Sa
a
lf
e
ld
Fix
e
d several bu
g
s in a
n
d extended MovingLeastSquar
e
s
T
ran
s
f
orm
:
commit
|
commitdiff
|
tree
2009-06-25
Stephan Saalf
e
ld
Patch calculates the memor
y
to free for r
e
nd
e
ring a
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Stephan Saalfeld
CoordinateTransfo
r
mLis
t
has a gene
r
ic paramete
r
that
.
.
.
commit
|
commitdiff
|
tree
2009-06-22
S
t
ephan Saalf
e
ld
M
e
r
g
e branch
'
p
a
intables' of ssh://s
a
alf
e
ld@repo
.
o
r
.
.
.
commit
|
commitdiff
|
tree
2009-06-20
Stephan Saalf
e
ld
A
l
ign wil
l
not accept models
w
ith les
s
t
han
7
inliers
.
.
.
commit
|
commitdiff
|
tree
2009-06-19
Stephan Saalfeld
Align
w
ill not accept models
w
ith l
e
ss
than 7 inliers
.
.
.
commit
|
commitdiff
|
tree
2009-06-19
St
e
p
h
an Sa
a
lfel
d
Workaround for a bug
w
hich was probably intro
d
uced
.
.
.
commit
|
commitdiff
|
tree
2009-06-17
Stephan Saalfeld
Merge branch
'
paint
a
bles' o
f
ssh://saa
l
feld@
r
epo
.
o
r
.
.
.
commit
|
commitdiff
|
tree
2009-06-17
Stephan Saalfeld
K
e
ep Points i
n
w
o
rld space
a
n
d
c
orrect fo
r
affine invariance
.
.
.
commit
|
commitdiff
|
tree
2009-06-16
Stephan
S
aal
f
eld
K
e
e
p
Points in world
space and correc
t
f
or affine i
n
var
i
ance
.
.
.
commit
|
commitdiff
|
tree
2009-06-13
S
tephan Saalfeld
Ad
d
ed several
T
O
DOs
.
commit
|
commitdiff
|
tree
2009-06-12
Stephan Saa
l
feld
Merg
e
b
r
anch 'paintable
s
'
o
f ssh://saalfeld@rep
o
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
Stephan Saalfeld
N
o
nLinearT
r
ans
f
o
rmMode can a
p
ply, but still
it lo
o
ks
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
Stephan Saalfeld
NonLinearTrans
f
orm
M
o
de in progress
.
Patches pai
n
t
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
Stepha
n
Saalfeld
Merge branch 'paintable
s
' of ss
h
://saalf
e
ld@rep
o
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
Stephan Saa
l
feld
Temporary commit on NonLin
e
arTransformMod
e
.
.
.
more
.
.
.
commit
|
commitdiff
|
tree
2009-06-11
Stephan Saalfeld
Merge b
r
an
c
h 'pa
i
ntables' o
f
ssh://saa
l
feld@re
p
o
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-11
Stephan Sa
a
lfeld
Merge branch 'paintables' of ssh://saal
f
eld@repo
.
o
r
.
.
.
commit
|
commitdiff
|
tree
2009-06-10
Stephan Saalfeld
Merg
e
branc
h
'
p
aintabl
e
s
'
of ssh://saalfe
l
d@repo
.
o
r
.
.
.
commit
|
commitdiff
|
tree
2009-06-08
Stephan
S
aalfeld
F
i
xed gen
e
rics
.
commit
|
commitdiff
|
tree
2009-04-23
Stephan
Saalfeld
Merge bran
c
h 'maste
r
' of ssh://saalf
e
ld@
r
epo
.
or
.
c
z
.
.
.
commit
|
commitdiff
|
tree
2009-04-23
Step
h
a
n
Saalf
e
ld
Removed
SIFT_Te
s
t
.
java
commit
|
commitdiff
|
tree
2009-04-23
S
t
ephan Saal
f
eld
Added comment
to Transf
o
r
m
Me
s
hMapping
commit
|
commitdiff
|
tree
2009-04-23
S
t
e
p
han Sa
a
lfeld
Adde
d
some missing final stateme
n
ts
i
n Tra
n
sfo
r
mMesh
commit
|
commitdiff
|
tree
2009-04-23
S
t
e
p
han Saalfe
l
d
U
se static fie
l
ds f
o
r d
i
alo
g
in
i
tializa
t
ion in Alig
n
Ta
s
k
.
commit
|
commitdiff
|
tree
2009-04-06
Stephan Sa
a
lf
e
ld
Fi
x
ed blend-alpha
.
commit
|
commitdiff
|
tree
2009-04-03
Stephan
S
aalfeld
P
ut align mul
t
i
-
l
ayer mosaic in TrakEM2 shape and inserted
.
.
.
commit
|
commitdiff
|
tree
2009-04-03
S
tepha
n
S
a
alf
e
ld
Extended Tran
s
formM
e
s
h
Mapping
to create inve
r
s
ely transforme
.
.
.
commit
|
commitdiff
|
tree
2009-04-02
Stephan Saalfe
l
d
Merge branch 'i
c
t' o
f
ss
h
://s
a
alfeld@repo
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-04-02
Steph
a
n Saalfeld
Multi
-
layer m
o
saicki
n
g with S
I
F
T
using
t
he proper
new
.
.
.
commit
|
commitdiff
|
tree
2009-03-30
Stephan Saalfeld
Added Exception Handling for
the (not
y
et pushed) changes in
commit
|
commitdiff
|
tree
2009-03-30
Ste
p
han Saa
l
feld
ARGB-images will be loaded as ARG
B
_
P
R
E whi
c
h s
p
eeds
.
.
.
commit
|
commitdiff
|
tree
2009-03-05
Stephan
Saalfeld
Fixed the
two-sided
e
xport of ser
i
ali
z
e
d PointMatch
e
s
commit
|
commitdiff
|
tree
2009-03-05
Steph
a
n Saalfeld
Me
r
g
e
branch 'unuid-mipm
a
ps' of ssh://
s
aa
l
feld@rep
o
.
.
.
commit
|
commitdiff
|
tree
2009-03-05
Stephan Saal
f
e
l
d
Added clone() m
e
thod to CoordinateTransform an
d
all
.
.
.
commit
|
commitdiff
|
tree
2009-03-05
Stephan Saalfeld
Added bug report to TODO
commit
|
commitdiff
|
tree
2009-02-24
St
e
phan Saalfeld
Re-added
5
1
e17a96c1cb33f2eee7da67743d
2
5522fff232
c
commit
|
commitdiff
|
tree
2009-02-23
Steph
a
n Saalfeld
Me
r
ge branch 'ict' of ssh:
/
/
s
aalf
e
ld@
r
epo
.
or
.
c
z
/
s
rv
.
.
.
commit
|
commitdiff
|
tree
2009-02-13
Stephan Saalfeld
Merge branch 'ict'
of ssh://saa
l
fel
d
@
repo
.
or
.
cz/
s
rv
.
.
.
commit
|
commitdiff
|
tree
2009-02-12
Ste
p
h
a
n Sa
a
lfeld
Mer
g
e bra
n
ch
'
ict' of
s
sh://
s
a
alfe
l
d@repo
.
or
.
cz/sr
v
.
.
.
commit
|
commitdiff
|
tree
2009-02-12
Stephan Saal
f
eld
Merge branch 'i
c
t' of ssh://saalfeld@
r
epo
.
or
.
c
z
/
srv
.
.
.
commit
|
commitdiff
|
tree
2009-02-12
S
t
e
ph
a
n
Saa
l
feld
Add
e
d method getCoordina
t
eTrans
f
ormB
o
undi
n
gBo
x
to
Patch
commit
|
commitdiff
|
tree
2009-02-06
S
t
ephan Saalfeld
Fixed
th
e
Coordin
a
teTra
n
sformL
i
s
t X
M
L export
.
commit
|
commitdiff
|
tree
2009-02-06
St
e
pha
n
S
a
alfeld
Added the me
t
ho
d
appendCoo
r
dinat
e
Transfo
r
m to Patch
.
.
.
commit
|
commitdiff
|
tree
2009-02-03
Stephan
S
aalfeld
Updated
TODO
commit
|
commitdiff
|
tree
2009-02-03
S
tephan
Saa
l
feld
Comment makeup
commit
|
commitdiff
|
tree
2009-02-02
Stephan Saalfeld
Merge
b
r
a
nch 'ict' into ict2
commit
|
commitdiff
|
tree
2009-02-02
Ste
p
han Saalfeld
Made boolean parame
t
ers static
.
commit
|
commitdiff
|
tree
2009-02-02
Stephan Saalfeld
Add
e
d explanation of what
t
he method does
.
commit
|
commitdiff
|
tree
2009-02-02
Ste
p
ha
n
Saal
f
e
ld
Adde
d
mak
e
VirtualConnections method for AbstractAffineTile2
D
.
commit
|
commitdiff
|
tree
2009-02-02
Stephan Saalfeld
Static Param objects are
p
ublic
.
commit
|
commitdiff
|
tree
2009-01-28
S
tephan Saalfe
l
d
Replac
e
d
D
BObject
.
g
etId(
)
i
n
cache-file names by DBObject
.
.
.
commit
|
commitdiff
|
tree
2009-01-28
Step
h
an Saalfeld
De
l
etes
t
he affected ca
c
hed PointMatches on mipm
a
p
.
.
.
commit
|
commitdiff
|
tree
2009-01-28
S
t
epha
n
Saalf
e
ld
A
dded S
t
ring getU
n
iq
u
eIdentifier() to
DBObject
.
The
.
.
.
commit
|
commitdiff
|
tree
2009-01-21
S
t
ep
h
an Saalfeld
Merge bra
n
ch 'ict'
o
f
ssh://saalfeld@rep
o
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-21
Ste
p
han Sa
a
lfeld
Added a T
O
DO
commit
|
commitdiff
|
tree
2009-01-21
Ste
p
ha
n
S
aalfeld
A
l
ign and AlignT
a
sk cache ex
t
r
a
c
ted PointMatch
e
s in
.
.
.
commit
|
commitdiff
|
tree
2009-01-17
St
e
phan Saalfeld
Me
r
g
e bran
c
h
'ict
'
of ssh://saalfeld@r
e
po
.
or
.
cz/sr
v
.
.
.
commit
|
commitdiff
|
tree
2009-01-17
Stephan Saal
f
eld
Added checking f
o
r int
e
rruption i
n
the monta
g
e
-method
.
commit
|
commitdiff
|
tree
2009-01-17
Stephan S
a
a
l
f
e
l
d
Fixed p
r
ogress bar
d
isp
l
ay
commit
|
commitdiff
|
tree
2009-01-17
Stephan Saa
l
fel
d
L
i
n
e
a
r
l
ayer ali
g
nm
e
nt
s
tops l
o
oping on interrup
t
ion
.
.
.
commit
|
commitdiff
|
tree
2009-01-17
Stephan Saalfeld
Threads in Align finish l
o
oping
o
n i
n
terrupti
o
n
.
commit
|
commitdiff
|
tree
2009-01-17
St
e
ph
a
n
Saa
l
fe
l
d
Mer
g
e
branch 'ict' of ssh://sa
a
lfeld
@
repo
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-17
S
t
ephan
Saa
l
fel
d
Linear layer
-
alignment updated u
s
ing t
h
e mpicbg_
.
ja
r
.
commit
|
commitdiff
|
tree
2009-01-17
Stephan S
a
alfeld
Use Al
i
gnTask for mosaic
a s
e
le
c
tion
.
commit
|
commitdiff
|
tree
2009-01-17
Steph
a
n
Saalfeld
Minor H
i
story-c
h
a
n
ge
s
.
commit
|
commitdiff
|
tree
2009-01-16
St
e
phan Saa
l
feld
M
e
r
g
e branch 'ict
'
of ssh://saalfeld@repo
.
or
.
cz/
s
rv
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
Stephan Saalfel
d
Added Al
i
gnTask for th
e
hig
h
e
r
log
i
c of alig
n
ment task
s
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
S
tephan Saalfel
d
M
e
rge branch 'ict' of ssh:/
/
saalfeld
@
r
epo
.
or
.
cz
/
srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
Step
h
an Saalfe
l
d
Ma
d
e
m
picbg in Tr
a
kEM2 b
m
picbg
.
trakem2
i
n order to
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
Stephan Saalfeld
Merge branch 'ict' of s
s
h://saalfeld@r
e
po
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
Stephan Sa
a
lfeld
Pr
o
gress with swit
c
hi
n
g to t
h
e
n
ew mpicbg_
.
jar
.
"Monta
g
e
.
.
.
commit
|
commitdiff
|
tree
2009-01-15
Ste
p
han Saalfeld
Me
r
ge branch 'ict' of ssh://saa
l
fe
l
d@repo
.
o
r
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-15
Ste
p
han Saalfeld
Replaced 64px minimal mipmap size wit
h
32px
.
Removed
.
.
.
commit
|
commitdiff
|
tree
2009-01-15
Stephan Saalf
e
ld
Split mpicbg into mpicbg and mpicbg
.
transform
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2009-01-15
Step
h
an Sa
a
lfeld
M
e
rge
b
ranch 'ict' of ssh://saalfe
l
d@repo
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o
r
.
cz/srv
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