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sync last commit
2009-01-21
cjfields
s
y
nc last
commit
commit
|
commitdiff
|
tree
2009-01-21
cjfields
* sync w
i
th trun
k
commit
|
commitdiff
|
tree
2009-01-21
cjfields
* sync
wit
h
trunk
commit
|
commitdiff
|
tree
2009-01-21
cjf
i
elds
* delete Bio
:
:DB::Se
q
Feature::Store:
:
DBI::Pg
p
e
r
Scott
.
.
.
commit
|
commitdiff
|
tree
2009-01-20
cjf
i
e
lds
sync wit
h
m
ai
n
trunk
commit
|
commitdiff
|
tree
2009-01-16
cjfields
In
c
.
RC v
e
rsion
commit
|
commitdiff
|
tree
2009-01-16
cjf
i
elds
c
arry over tes
t
fi
x
es from trunk
commit
|
commitdiff
|
tree
2009-01-16
cjfi
e
lds
C
a
rry over test change from main
t
runk
commit
|
commitdiff
|
tree
2009-01-16
cjfiel
d
s
Sync with main
t
runk
commit
|
commitdiff
|
tree
2009-01-13
cjfields
Sync with main trunk
commit
|
commitdiff
|
tree
2009-01-13
c
j
fields
S
ync
w
ith main trunk
commit
|
commitdiff
|
tree
2009-01-06
cjfields
Sync with
trunk
.
T
h
i
s will appear in fin
a
l r
e
l
ease
.
commit
|
commitdiff
|
tree
2009-01-06
cjfie
l
ds
Resolve con
f
lict (can't directly m
e
rge since trunk
.
.
.
commit
|
commitdiff
|
tree
2009-01-06
cj
f
ields
Sync that last b
i
t w
i
th trunk
.
I'll
h
ave to
merge
.
.
.
commit
|
commitdiff
|
tree
2009-01-06
cjfi
e
lds
Sync wi
t
h tru
n
k
commit
|
commitdiff
|
tree
2009-01-05
cjfields
B
um
p
RC
t
o
2
; will tag
,
ba
g
,
and ship tomorrow after
.
.
.
commit
|
commitdiff
|
tree
2009-01-05
cjfields
Syn
c
with trunk
commit
|
commitdiff
|
tree
2009-01-04
cjfields
sync with trunk
commit
|
commitdiff
|
tree
2009-01-02
c
j
f
ields
sync from tru
n
k
commit
|
commitdiff
|
tree
2009-01-02
cjfield
s
sync last commit
commit
|
commitdiff
|
tree
2009-01-02
c
jfields
s
ync with
H
EAD
commit
|
commitdiff
|
tree
2009-01-02
cjfields
Rem
o
ve t/Graphics
commit
|
commitdiff
|
tree
2009-01-02
cjfie
l
d
s
Remove Bio::Graphics exampl
e
s and scripts
commit
|
commitdiff
|
tree
2008-12-26
cjfields
em
p
ty directory
commit
|
commitdiff
|
tree
2008-12-26
cjfi
e
lds
Empty directo
r
y
commit
|
commitdiff
|
tree
2008-12-26
cjfields
e
mp
t
y dire
c
tory
commit
|
commitdiff
|
tree
2008-12-26
cjfields
sync with trunk
commit
|
commitdiff
|
tree
2008-12-24
cjfiel
d
s
s
mall cla
r
ificat
i
on
commit
|
commitdiff
|
tree
2008-12-24
cjf
i
eld
s
A
dd
list of
bugs slated
f
o
r the 1
.
6
.
x
serie
s
commit
|
commitdiff
|
tree
2008-12-24
cjfie
l
ds
Upda
t
es for RC1
commit
|
commitdiff
|
tree
2008-12-24
cjfields
r
emove Micro
a
rray
deps
commit
|
commitdiff
|
tree
2008-12-24
cjf
i
e
l
ds
S
m
all fix f
o
r tests
J
IC there is a network er
r
or
commit
|
commitdiff
|
tree
2008-12-24
cjfiel
d
s
Sy
n
c
b
ranch with trunk
commit
|
commitdiff
|
tree
2008-12-24
cjfields
R
e
move Bio::Micro
a
rray fr
o
m branch (still
in developme
n
t
.
.
.
commit
|
commitdiff
|
tree
2008-12-24
c
j
f
i
elds
Remove (
m
erg
e
di
d
n
'
t
r
emov
e
this for some reason)
commit
|
commitdiff
|
tree
2008-12-24
cjfield
s
Remove (
m
e
r
ge didn't remove
this
f
or som
e
r
e
a
s
on)
commit
|
commitdiff
|
tree
2008-12-22
cjfi
e
lds
sync t
r
unk wi
t
h branch
commit
|
commitdiff
|
tree
2008-12-20
cj
f
ields
5
.
6
.
1 is
min pe
r
l
version required fo
r
all
core modules now
commit
|
commitdiff
|
tree
2008-12-19
c
j
fi
e
lds
update NAMES
commit
|
commitdiff
|
tree
2008-12-19
cjfields
small typo
commit
|
commitdiff
|
tree
2008-12-18
cj
f
ields
ty
p
o
commit
|
commitdiff
|
tree
2008-12-18
cjfield
s
[bug 2714]
commit
|
commitdiff
|
tree
2008-12-17
cjfie
l
ds
f
ix t
e
st number
commit
|
commitdiff
|
tree
2008-12-17
cjfields
update
T
e
s
t
:
:
Warn (fixes
Qual
.
t test
pro
b
lems with
.
.
.
commit
|
commitdiff
|
tree
2008-12-16
cjfields
m
issed one
commit
|
commitdiff
|
tree
2008-12-16
cjfields
EU
t
ilities r
e
mote tests back online (si
m
ple te
s
ts only)
commit
|
commitdiff
|
tree
2008-12-16
cjf
i
el
d
s
EUti
l
iti
e
s re
m
ote te
s
t
s
b
ack onlin
e
(si
m
ple tests on
l
y
)
commit
|
commitdiff
|
tree
2008-12-16
c
j
fields
You mu
s
t
actually test data if you wa
n
t t
h
is module
.
.
.
commit
|
commitdiff
|
tree
2008-12-16
cjfie
l
ds
Don't use print! Cha
n
g
ing
t
o
$
sel
f
->debug
o
r
c
ommenting out
commit
|
commitdiff
|
tree
2008-12-16
cjfields
B
i
o::Graph de
p
recated in 1
.
6
commit
|
commitdiff
|
tree
2008-12-16
cjfields
stif
l
e war
n
ings when passing string instead o
f
integer
commit
|
commitdiff
|
tree
2008-12-16
cjfields
hash ref, not array r
e
f
commit
|
commitdiff
|
tree
2008-12-16
cj
f
ields
[bug 2637]
commit
|
commitdiff
|
tree
2008-12-16
cjfields
[bug 2637]
commit
|
commitdiff
|
tree
2008-12-16
c
j
f
iel
d
s
[bug 2637]
commit
|
commitdiff
|
tree
2008-12-16
cjfields
[bug 2637]
commit
|
commitdiff
|
tree
2008-12-15
cjfield
s
[bug
2
6
37]
commit
|
commitdiff
|
tree
2008-12-15
cjfie
l
ds
[bug
2
712]
commit
|
commitdiff
|
tree
2008-12-15
cjf
i
eld
s
scores
commit
|
commitdiff
|
tree
2008-12-15
cj
f
ields
r
emai
n
i
ng test
s
for Bio::Tool::E
U
tiliti
e
s
commit
|
commitdiff
|
tree
2008-12-15
c
j
f
ields
mor
e
test data
commit
|
commitdiff
|
tree
2008-12-15
cjfields
Updat
e
s:
commit
|
commitdiff
|
tree
2008-12-13
cjfields
ini
t
ial b
a
tch of E
U
tilPara
m
eters test
s
commit
|
commitdiff
|
tree
2008-12-13
cjfields
einfo te
s
ts
commit
|
commitdiff
|
tree
2008-12-12
cjfields
some EUtiliti
e
s test
s
(parsing
from files)
commit
|
commitdiff
|
tree
2008-12-12
cjf
i
elds
som
e
test d
a
t
a fo
r
B
i
o::Tools
:
:
EUtilities
commit
|
commitdiff
|
tree
2008-12-12
cjfields
up
d
ates to EUtilities (getting
r
ea
d
y for docs, tes
t
s
.
.
.
commit
|
commitdiff
|
tree
2008-12-12
c
jfields
M
ove EU
t
ilParam
e
ters to Tools (seems more a
p
propriate)
commit
|
commitdiff
|
tree
2008-12-11
cjfields
fix
for bug when g
e
tting cach
e
d response
w
i
th filenam
e
.
.
.
commit
|
commitdiff
|
tree
2008-12-11
c
j
f
ields
small p
o
inter to
wiki pag
e
(wil
l
upd
a
te along
w
ith
.
.
.
commit
|
commitdiff
|
tree
2008-12-11
cjfiel
d
s
s
mal
l
upd
a
te
commit
|
commitdiff
|
tree
2008-12-11
cjfields
updates
commit
|
commitdiff
|
tree
2008-12-11
cjfields
return, not
'return undef'
commit
|
commitdiff
|
tree
2008-12-11
cjfields
r
e
turn
,
no
t
're
t
u
r
n undef'
commit
|
commitdiff
|
tree
2008-12-11
cjfi
e
ld
s
[
bug 2699]
commit
|
commitdiff
|
tree
2008-12-11
cjfield
s
[bug 2699]
commit
|
commitdiff
|
tree
2008-12-11
cjfields
[bug 2707]
commit
|
commitdiff
|
tree
2008-12-10
cjfield
s
Removi
n
g
f
rom
H
EAD (de
p
reca
t
ed for 1
.
6
)
commit
|
commitdiff
|
tree
2008-12-10
cjfields
mini p
o
d
fix
commit
|
commitdiff
|
tree
2008-12-10
c
j
fields
u
p
date d
e
precation
list
commit
|
commitdiff
|
tree
2008-12-10
cj
f
i
e
lds
remo
v
e
B
io::Gr
a
ph
i
c
s
(separate pa
c
kag
e
now)
commit
|
commitdiff
|
tree
2008-12-10
cjfie
l
ds
[b
u
g
2
6
3
7]
commit
|
commitdiff
|
tree
2008-12-10
cjfields
Re
m
ove de
p
endencies for B
i
o::Graphics and deprecat
e
d
.
.
.
commit
|
commitdiff
|
tree
2008-12-09
cjfield
s
Sq
u
ash warning
commit
|
commitdiff
|
tree
2008-12-09
cj
f
ields
diag() onl
y
o
n
verbose
commit
|
commitdiff
|
tree
2008-12-09
cjfields
Fix last loop tests, move
s
o
me to can_ok
commit
|
commitdiff
|
tree
2008-12-09
cjfields
Modify
to test n
e
w temp
class
e
s
an
d
ensure that added
.
.
.
commit
|
commitdiff
|
tree
2008-12-09
cjfiel
d
s
u
p
date
Mauric
i
o's email
commit
|
commitdiff
|
tree
2008-12-08
cjfield
s
Update Roy's email
commit
|
commitdiff
|
tree
2008-12-08
cjfiel
d
s
Roy'
s
email (and
bioper
l
.
org n
o
t bioperl
.
edu)
commit
|
commitdiff
|
tree
2008-12-08
cjfi
e
ld
s
Updated
emails
commit
|
commitdiff
|
tree
2008-12-07
cjfields
[bug 2699]
commit
|
commitdiff
|
tree
2008-12-05
cjfields
N
eed to retrieve th
e
t
re
e
for out
p
ut
commit
|
commitdiff
|
tree
2008-12-05
cjfields
[b
u
g 2450]
commit
|
commitdiff
|
tree
2008-12-04
cjfields
Ma
k
e
Target a true DBLink
commit
|
commitdiff
|
tree
2008-12-04
cjfields
Directory is n
o
longer n
e
eded
(Heik
k
i split th
i
s up
.
.
.
commit
|
commitdiff
|
tree
2008-12-03
cjfields
a
dd force_nse tests
commit
|
commitdiff
|
tree
2008-12-03
cjfields
l
eave
I
D
u
n
d
efined if it
i
sn
'
t
present, b
u
t
a
ll
o
w
t
h
e
.
.
.
commit
|
commitdiff
|
tree
2008-12-03
c
jf
i
elds
Rem
o
ve files accidently added from las
t
commit
commit
|
commitdiff
|
tree
2008-12-03
cjfield
s
Reorga
n
ize Tools tests
(needs
some more spl
i
tting
)
commit
|
commitdiff
|
tree
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