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ElasticMontage:
2011-06-29
St
e
phan
S
aalfeld
Elasti
c
Mo
n
tage:
commit
|
commitdiff
|
tree
2011-06-29
Stephan Saalfeld
M
e
rge branch
'
master' into elastic-
a
lign
commit
|
commitdiff
|
tree
2011-06-28
Stephan Sa
a
l
f
eld
Merg
e
branc
h
'ma
s
ter' into elastic-ali
g
n
commit
|
commitdiff
|
tree
2011-06-28
Step
h
an Saalfe
l
d
Adde
d
`
s
eems-
t
o-work' elasti
c
mont
a
ging
.
Missin
g
p
arts
a
re
commit
|
commitdiff
|
tree
2011-06-28
Steph
a
n
Saalfeld
* made
P
atch
.
PatchImage a static cl
a
ss (it has no references
.
.
.
commit
|
commitdiff
|
tree
2011-06-24
Stephan Saa
l
feld
a
d
ded
Pair to Abstract
commit
|
commitdiff
|
tree
2011-06-23
S
tephan Saa
l
feld
Al
i
gn
.
java: moved twi
c
e implemen
t
ed Model fitting an
d
.
.
.
commit
|
commitdiff
|
tree
2011-06-23
Stephan Saalfeld
Elasti
c
Align uses
the loc
a
l sif
t
Par
a
m
f
or identifying
commit
|
commitdiff
|
tree
2011-06-23
S
t
ephan Saalfeld
TransformMeshMappingWithMask
rounds triang
e
l bo
u
nding
.
.
.
commit
|
commitdiff
|
tree
2011-06-21
St
e
phan Saalfeld
attempt to get shared
function for layer a
l
ignment
.
.
.
commit
|
commitdiff
|
tree
2011-06-21
Stephan
Saalfeld
titled montage dialog `Monta
g
e' consis
t
ent
l
y with the
.
.
.
commit
|
commitdiff
|
tree
2011-06-21
Stepha
n
Saalfeld
Fixed
T
h
r
ead interru
p
t
i
on in Ali
g
n
.
co
n
nectTilePai
r
s
.
.
.
commit
|
commitdiff
|
tree
2011-06-20
S
t
epha
n
Saalfeld
`Montage a
l
l i
m
ag
e
s in th
i
s layer':
commit
|
commitdiff
|
tree
2011-06-17
Stephan Saalfeld
Ela
s
ticAlign fixes:
commit
|
commitdiff
|
tree
2011-06-16
Stephan Saalfeld
Merg
e
branch 'master'
i
n
to e
l
as
t
ic-ali
g
n
commit
|
commitdiff
|
tree
2011-06-16
Stephan Saalfeld
comment test
r
pint
commit
|
commitdiff
|
tree
2011-05-27
Stephan Sa
a
lfeld
started with Elastic Alignment,
l
ayer
alignmen
t
already
.
.
.
commit
|
commitdiff
|
tree
2010-11-29
S
t
ephan Saalfeld
Mer
g
e branch
'
m
aster
'
in
t
o
m
picbg-model-in
t
erfa
c
e
commit
|
commitdiff
|
tree
2010-11-20
Stepha
n
Saalfel
d
tracking
mpicbg mod
e
l-
i
nterface
commit
|
commitdiff
|
tree
2010-08-18
Stephan Saalfeld
m
p
icbg
.
trak
e
m
2
.
transform
.
TransformMesh
e
x
t
rap
o
lates
.
.
.
commit
|
commitdiff
|
tree
2010-08-16
St
e
p
h
a
n
S
aalfeld
Fixed
bug 202
commit
|
commitdiff
|
tree
2010-08-16
Stephan Saalfeld
* add mi
n
i
m
a
l absolute number of inliers as a
pa
r
ameter
commit
|
commitdiff
|
tree
2010-08-16
Stepha
n
Saa
l
feld
M
erge branc
h
'ma
s
ter' into
r
eje
c
tconstantbackgroun
d
commit
|
commitdiff
|
tree
2010-08-16
Stephan
Saalfeld
Me
r
ge branch 'maste
r
' of ssh://
r
e
p
o
.
or
.
cz/s
r
v/git/trake
m
2
commit
|
commitdiff
|
tree
2010-08-07
Stepha
n
Saalfeld
M
e
rge branch 'reje
c
tco
n
stantbackground' of
s
sh://repo
.
.
.
commit
|
commitdiff
|
tree
2010-08-07
Step
h
an
S
aal
f
eld
findin
g
con
n
e
c
t
ed tiles
m
oved i
n
t
o b
a
se class
commit
|
commitdiff
|
tree
2010-08-07
Stephan
Saalfeld
use o
u
tlier filt
e
r in opti
m
i
zer
commit
|
commitdiff
|
tree
2010-08-07
Stephan
Sa
a
lfeld
f
i
nding connec
t
ed tiles mo
v
ed into base clas
s
commit
|
commitdiff
|
tree
2010-08-06
Stephan
Sa
a
lf
e
ld
Merge branch 'rejectcons
t
antbackgroun
d
'
of s
s
h://repo
.
.
.
commit
|
commitdiff
|
tree
2010-08-06
S
tephan Saalfeld
Fix wrong parameter choice in A
l
ig
n
Task
commit
|
commitdiff
|
tree
2010-08-05
Stephan S
a
alfeld
Merge b
r
anch 'mas
t
er
'
into rej
e
ctc
o
nstantbackgr
o
und
commit
|
commitdiff
|
tree
2010-08-05
S
t
e
p
ha
n
Saalfeld
extend
e
d verbosity of the
t
ile matching
commit
|
commitdiff
|
tree
2010-08-05
Stephan Saalfeld
Added a filter to reject
c
onsta
n
t backgro
u
nd pattern
s
.
.
.
commit
|
commitdiff
|
tree
2010-03-19
Stephan Sa
a
l
f
e
l
d
Me
r
ge branch '
m
aster' of
ssh:
/
/repo
.
or
.
cz
/
srv/git/tra
k
em2
commit
|
commitdiff
|
tree
2010-03-19
Step
h
an Saalfeld
Recovered the most importatn of Ignaci
o
's prev
i
o
u
s
.
.
.
commit
|
commitdiff
|
tree
2010-03-19
Stepha
n
Saalfeld
Merge branch '
m
aster' into lens-
m
od
e
l
commit
|
commitdiff
|
tree
2010-03-19
Stephan Saalf
e
ld
Cre
a
ted P
o
lynomialModel2D, a
w
r
a
pper
fo
r
V
erena Kayni
g
's
commit
|
commitdiff
|
tree
2010-03-18
Steph
a
n Saalfel
d
Added the maxima
l
accep
t
ed
f
actor
to mean Poi
n
tMatch
.
.
.
commit
|
commitdiff
|
tree
2010-03-17
Stephan Saalfeld
Remov
e
matc
h
es with large displac
e
men
t
from
the configuration
commit
|
commitdiff
|
tree
2010-02-23
Stephan S
a
alfeld
fixed c
a
librat
i
on of scaled snap
s
hots wh
e
n
ex
p
orting
.
.
.
commit
|
commitdiff
|
tree
2010-02-22
Stephan
S
aalfel
d
fixed c
a
libration of
sca
l
ed snapshots
commit
|
commitdiff
|
tree
2010-02-19
Stepha
n
Saal
f
e
l
d
Al
i
gnTask: when deforming, til
e
s ARE alre
a
dy in place
commit
|
commitdiff
|
tree
2010-02-19
Steph
a
n Saal
f
el
d
Ali
g
nTas
k
: Fix
e
d missuse of a
static variab
l
e
.
commit
|
commitdiff
|
tree
2010-02-19
S
tepha
n
S
a
alfeld
Remove the never u
s
e
d
s
h
ake m
e
t
h
o
d
from abs
t
ract Model
.
commit
|
commitdiff
|
tree
2010-02-10
S
t
e
p
han Sa
a
l
f
e
ld
Fixed a bug that made the original image
appear behi
n
d
commit
|
commitdiff
|
tree
2010-02-09
S
tephan Saalfeld
Synchr
o
nized screenPatchRanges
commit
|
commitdiff
|
tree
2010-02-09
S
teph
a
n
Saalfeld
minor cleanup in lenscor
r
ec
t
ion
commit
|
commitdiff
|
tree
2010-02-09
Steph
a
n
Saalfeld
Added Transf
o
rmMeshMappingWithMasks for more efficient
.
.
.
commit
|
commitdiff
|
tree
2010-02-09
S
t
ep
h
an Saa
l
fel
d
NonLine
a
rTra
n
s
formMode
can
p
r
opagate the t
r
ansforma
t
ion
.
.
.
commit
|
commitdiff
|
tree
2010-02-07
S
t
ephan S
a
a
l
feld
For now, don't s
c
ale maxEpsi
l
on
.
commit
|
commitdiff
|
tree
2010-02-07
Ste
p
han
S
a
a
l
feld
A
l
ig
n
Multi-
L
ayer-Mos
a
i
c
: U
s
e
up
to
2
x maxOctaveSize
.
.
.
commit
|
commitdiff
|
tree
2010-01-29
Stepha
n
Saa
l
feld
F
i
nished
the defo
r
m operation
t
o consider all graphs
.
.
.
commit
|
commitdiff
|
tree
2010-01-29
Stepha
n
Sa
a
lfeld
Fixed F
l
oat
.
MIN_VALUE to
Float
.
MAX_
V
ALUE where it re
m
ained
.
.
.
commit
|
commitdiff
|
tree
2010-01-29
Stephan
S
a
alf
e
ld
alignMultiLay
e
rMosaic f
i
nally uses
graph-bas
e
d
pre
.
.
.
commit
|
commitdiff
|
tree
2010-01-29
Ste
p
h
an
Saa
l
f
e
ld
changed default
value o
f
SIFT
.
maxOctaveS
i
ze = 600
commit
|
commitdiff
|
tree
2010-01-29
S
t
ephan Saalfeld
fix
e
d pairOverlappingTiles( List,
L
ist, List
[
] )
commit
|
commitdiff
|
tree
2010-01-28
Stephan
S
aalfeld
ad
d
ed
c
orrespond
e
nce we
i
g
h
t as a parame
t
er
to Align
.
.
.
commit
|
commitdiff
|
tree
2009-11-05
Stephan Saalfeld
Merge br
a
nch
'
m
a
ster' into bunwarpj
commit
|
commitdiff
|
tree
2009-11-04
Stephan Saalfeld
Mer
g
e br
a
nc
h
'mas
t
e
r
' into
bun
w
arpj
commit
|
commitdiff
|
tree
2009-11-03
Stephan Saalfeld
Fixed Composit
e
M
o
d
e
s
to work
i
n the following configurations
commit
|
commitdiff
|
tree
2009-11-03
Ste
p
han Saalfeld
Revert "Wor
k
around annoying bug in Graphics2D, in
.
.
.
commit
|
commitdiff
|
tree
2009-11-03
S
t
e
p
han Saalfel
d
F
ixed Compo
s
iteModes to work in the
f
ollowing configura
t
ions
commit
|
commitdiff
|
tree
2009-11-03
Steph
a
n Saalfe
l
d
Separ
a
ting AlignLa
y
ersTask from
AlignTask
.
commit
|
commitdiff
|
tree
2009-11-03
S
t
epha
n
Saalfeld
Revert "Work
around anno
y
i
ng bug in G
r
aph
i
cs2D, in
.
.
.
commit
|
commitdiff
|
tree
2009-11-03
S
t
ephan Saa
l
feld
Me
r
ge branch 'mas
t
er
'
i
nto c
o
mpo
s
ite-mod
e
s
commit
|
commitdiff
|
tree
2009-11-03
S
t
ep
h
an Saalfe
l
d
A
ddARG
B
Composite can handle
i
mage with no alpha
.
commit
|
commitdiff
|
tree
2009-11-03
St
e
phan
Sa
a
lfe
l
d
Adde
d
a
c
omment in
Align
commit
|
commitdiff
|
tree
2009-10-14
Stephan
S
aalfel
d
r
e
factored a mi
s
named
method and stati
f
ied some param
e
ters in
commit
|
commitdiff
|
tree
2009-10-14
Stephan Sa
a
lfeld
syn
c
hronized
p
otent
i
ally concurrency
u
n
safe m
a
t
ch insertion
.
.
.
commit
|
commitdiff
|
tree
2009-10-13
S
tephan Saal
f
eld
Fixed the geome
t
ry issues and added support for all
.
.
.
commit
|
commitdiff
|
tree
2009-10-09
Ste
p
h
an Saa
l
feld
Catc
h
ing and handli
n
g Ou
t
OfM
e
moryErrors in F
e
atureEx
t
raction
.
.
.
commit
|
commitdiff
|
tree
2009-10-08
Stephan Saalfeld
Cosmetics in Ali
g
nTas
k
and SimilarityModel
2
D
commit
|
commitdiff
|
tree
2009-10-08
Stephan Saalfeld
len
s
correction stops no
w
later
but l
a
test after
t
he
.
.
.
commit
|
commitdiff
|
tree
2009-10-08
S
t
ephan Sa
a
lfeld
Merge branch
'master
'
of ssh://re
p
o
.
or
.
c
z/srv/git/t
r
ake
m
2
commit
|
commitdiff
|
tree
2009-10-07
S
t
ephan S
a
alfeld
Merge br
a
nch
'master' of
s
sh:
/
/repo
.
or
.
cz/srv/git/trakem2
commit
|
commitdiff
|
tree
2009-10-07
S
tephan Saalfeld
Fix 0
.
5grey background for ByteProcessors in
commit
|
commitdiff
|
tree
2009-09-24
S
tephan Saalfeld
Me
r
ge branch 'm
a
ster' of ssh:
/
/repo
.
or
.
cz/srv/
g
it/trake
m
2
commit
|
commitdiff
|
tree
2009-09-23
Stephan Sa
a
lfeld
Savi
n
g a
l
ot
o
f RA
M
in v
i
sualizing the
l
e
ns distortion
.
.
.
commit
|
commitdiff
|
tree
2009-09-17
Step
h
an Saalfeld
Mer
g
e branch 'stack' into align
commit
|
commitdiff
|
tree
2009-09-17
Stephan
S
aal
f
el
d
Hopefully fixed the
s
calin
g
in Stack
commit
|
commitdiff
|
tree
2009-09-17
Stephan S
a
al
f
eld
Merge branch 'stack
'
into align
commit
|
commitdiff
|
tree
2009-09-17
S
t
ephan S
a
alfeld
Merge br
a
nch 's
t
ack' o
f
ssh://repo
.
or
.
cz/sr
v
/git/trakem2
.
.
.
commit
|
commitdiff
|
tree
2009-09-17
S
t
ephan
S
a
a
lfeld
Merge
b
r
a
n
c
h 'sta
c
k' into align
commit
|
commitdiff
|
tree
2009-09-17
Stephan Saalfe
l
d
separate
d
the actual a
l
ig
n
La
y
ersLinearly job
f
rom the
.
.
.
commit
|
commitdiff
|
tree
2009-09-17
Stephan Saalfeld
Loader use
s
d
b
_lock
commit
|
commitdiff
|
tree
2009-09-16
Stephan Saalfeld
Merge bran
c
h '
a
li
g
n' of
s
sh:
/
/repo
.
or
.
cz/srv/git/
t
r
a
kem2
.
.
.
commit
|
commitdiff
|
tree
2009-09-16
Stephan Sa
a
lfel
d
Fi
x
e
d
a bug that prevented the multi
-
layer mosaicking
.
.
.
commit
|
commitdiff
|
tree
2009-09-14
Stephan Saalfe
l
d
Merge b
r
anch '
s
tack' of s
s
h://re
p
o
.
or
.
cz/srv/git/trakem2
.
.
.
commit
|
commitdiff
|
tree
2009-09-14
S
t
e
pha
n
S
aalfeld
a very intermediate commit that interr
u
p
t
s
m
e at
sta
r
ting th
e
commit
|
commitdiff
|
tree
2009-09-11
Stephan Saalfeld
d
e
c
achi
n
g
was not successf
u
l---tru
i
ng another one
.
.
.
commit
|
commitdiff
|
tree
2009-09-11
Stephan
Saalfeld
Decac
h
e p
r
oces
s
ed patch
e
s after application of
t
he CT
.
commit
|
commitdiff
|
tree
2009-09-10
Stephan Saalfeld
Merge branch 'align' of s
s
h://
r
epo
.
o
r
.
cz/srv/git/t
r
a
kem2
.
.
.
commit
|
commitdiff
|
tree
2009-09-10
Stephan
S
aa
l
f
e
ld
Added a defo
r
m
option to the multi-l
a
yer-mosaic m
e
thod
.
commit
|
commitdiff
|
tree
2009-09-10
Stephan Sa
a
lfeld
Added a deform o
p
tion to the multi
-
layer-mosaic method
.
commit
|
commitdiff
|
tree
2009-09-10
S
t
e
phan Saalfeld
Added a c
o
nven
i
e
n
c
e
method t
o
export a fla
t
i
m
age fo
r
.
.
.
commit
|
commitdiff
|
tree
2009-09-10
Stephan Saalfeld
Co
s
m
etics (removed s
o
me non-required imports and em
p
ty
.
.
.
commit
|
commitdiff
|
tree
2009-09-10
Stephan Saalfeld
A a
s
ta
t
i
c method to get the bo
u
nding box of
a
collecti
o
n of
commit
|
commitdiff
|
tree
2009-09-02
Stephan Saa
l
feld
* Fixe
d
wrong blurring
commit
|
commitdiff
|
tree
2009-09-01
St
e
phan Sa
a
l
f
eld
i
c
tScale was in
v
erse---anyway---there are
remaining
.
.
.
commit
|
commitdiff
|
tree
2009-09-01
S
t
ephan Saalfeld
P
seudo-f
i
x
for lock
i
ng issues
commit
|
commitdiff
|
tree
next