Added a deform option to the multi-layer-mosaic method.
commitd646986a2a4fe6b7c098fd9971890c5324be2f68
authorStephan Saalfeld <saalfeld@mpi-cbg.de>
Thu, 10 Sep 2009 16:22:42 +0000 (10 18:22 +0200)
committerStephan Saalfeld <saalfeld@mpi-cbg.de>
Thu, 10 Sep 2009 16:22:42 +0000 (10 18:22 +0200)
tree4f08c5f5ecea86ef705e2679166d0c8461471308
parentafbe30d0c7c8fe9027ac2a5b731c24f6cb9325eb
Added a deform option to the multi-layer-mosaic method.
Instead of transforming each tile with the affine (rigid or
whatever) transformation estimated in the global
intra-and-cross-layer optimization, the center-points of each
tile are used to deform the intra-section registered layer with a
MLS-transform.  That is, the overall appearance of the registration
is that of the globally optimized but sections are continuous in
themselves.

TODO Lacking a sufficient data set, not yet really tested.  I will
soon try it with the L1 "second_set"...
mpicbg/trakem2/align/Align.java
mpicbg/trakem2/align/AlignTask.java