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Disable GMXAPI when only building mdrun
2018-10-03
P
aul Bauer
Disab
l
e GMXA
P
I w
h
en o
n
ly b
u
ilding mdrun
commit
|
commitdiff
|
tree
2018-10-02
Paul Bauer
Fix inc
l
ude formatting
in gmxapi
commit
|
commitdiff
|
tree
2018-10-01
Pau
l
B
a
uer
Change get_ato
m
_in
d
ex
t
o return int
commit
|
commitdiff
|
tree
2018-09-20
Paul Bauer
Sep
a
rate m
e
t
h
ods to create localtop and t_to
p
ology
commit
|
commitdiff
|
tree
2018-09-20
Paul Baue
r
Al
w
ays u
s
e mtop c
o
nstructor
commit
|
commitdiff
|
tree
2018-09-17
Paul B
a
uer
Prop
e
rly i
n
i
t
ial
i
ze idef i
n
topologies
commit
|
commitdiff
|
tree
2018-09-14
Paul
Bau
e
r
Re
m
ove LaTeX
file writing fro
m
gmx check
commit
|
commitdiff
|
tree
2018-09-14
Paul Bau
e
r
In
t
rodu
c
e
g
mx rep
o
r
t-methods
commit
|
commitdiff
|
tree
2018-09-09
Paul Bauer
Remove
macro for g
r
oup typ
e
i
n
top
o
logy
commit
|
commitdiff
|
tree
2018-09-05
Paul
B
auer
Changes
t
o
d
ocumentati
o
n build script
commit
|
commitdiff
|
tree
2018-09-05
P
a
u
l Bauer
Improve stabilit
y
o
f
parallel docum
e
n
t
ation b
u
ild
commit
|
commitdiff
|
tree
2018-09-03
P
a
ul
Bauer
Fix error in docum
e
nt
a
t
ion build
commit
|
commitdiff
|
tree
2018-09-03
P
aul Bauer
Allow documentation to bui
l
d in pa
r
allel
commit
|
commitdiff
|
tree
2018-08-30
Pa
u
l Bauer
M
o
re fixe
s
from cl
a
ng-tidy-7
commit
|
commitdiff
|
tree
2018-08-28
Paul Bauer
F
i
x documentation build w
i
t
hout
imagemagick
commit
|
commitdiff
|
tree
2018-08-27
Pa
u
l Bauer
Transfer information f
r
om old ho
w
-to
s
ect
i
on
commit
|
commitdiff
|
tree
2018-08-23
Paul Bau
e
r
U
p
date to prepare fo
r
2
0
18
.
4 p
o
int rel
e
ase
commit
|
commitdiff
|
tree
2018-08-23
P
aul Bauer
Versi
o
n
2018
.
3
commit
|
commitdiff
|
tree
2018-08-22
P
a
u
l
Bau
e
r
Fix trjconv when running without a structur
e
fil
e
commit
|
commitdiff
|
tree
2018-08-14
Pa
u
l Baue
r
Upd
a
t
e
d
links i
n
user guide
commit
|
commitdiff
|
tree
2018-08-07
Paul
B
auer
R
emove duplic
a
te en
t
ry for Do
x
ygen from dev manua
l
commit
|
commitdiff
|
tree
2018-08-01
Paul Bauer
Fix
-
skip option for
g
mx rms
commit
|
commitdiff
|
tree
2018-07-30
Paul Bauer
F
ix bfa
c
to
r
o
u
t
put
commit
|
commitdiff
|
tree
2018-07-24
Pau
l
B
a
uer
C
hange
m
a
n
ual
section
o
n
restarts w/o
c
h
e
ckpoint
commit
|
commitdiff
|
tree
2018-06-08
Paul
B
auer
Fi
x
gmx solvate
w
ith multiple solvent
mol
e
cule types
commit
|
commitdiff
|
tree
2018-06-07
Paul
B
auer
Change use of
t
_inpf
i
l
e to
std::vector
commit
|
commitdiff
|
tree
2018-06-07
P
aul Bauer
Remove macros in input
file reading
commit
|
commitdiff
|
tree
2018-06-06
Paul Bauer
Fix PQR file outp
u
t
commit
|
commitdiff
|
tree
2018-05-30
P
au
l
Bauer
Disall
o
w
u
se of empty box
informati
o
n in solvent files
commit
|
commitdiff
|
tree
2018-05-04
Paul Bau
e
r
Fix
m
d -cpi -noappend
commit
|
commitdiff
|
tree
2018-04-27
Pau
l
Bauer
Fi
x
file reading i
n
gm
x
sans
commit
|
commitdiff
|
tree
2018-04-26
Paul Baue
r
Reorganize files for refe
r
enc
e
manua
l
commit
|
commitdiff
|
tree
2018-04-26
Pau
l
Bauer
Spl
i
t up ana
l
ysis ch
a
pter in reference manual
commit
|
commitdiff
|
tree
2018-04-26
P
aul Bauer
Split up s
p
ecial
topics
s
e
cti
o
n in m
a
nual
commit
|
commitdiff
|
tree
2018-04-26
Paul Bauer
Split up topology section in
manual
commit
|
commitdiff
|
tree
2018-04-26
Paul
Bauer
S
pli
t
up algo
r
ithms ma
n
ual
p
age
commit
|
commitdiff
|
tree
2018-04-25
Pau
l
B
aue
r
Add page break
s
in ref
e
r
e
nce manual
commit
|
commitdiff
|
tree
2018-04-25
P
au
l
Bauer
Split up Int
e
raction func
t
ions m
a
nual page
commit
|
commitdiff
|
tree
2018-04-25
P
a
ul
Ba
u
er
Change image conversion to
o
nly
b
e
build once
commit
|
commitdiff
|
tree
2018-04-21
Paul Bauer
C
onvert manual fr
o
m
L
aTeX to Mar
k
u
p
commit
|
commitdiff
|
tree
2018-04-21
Paul
B
a
ue
r
Second change tracking commit
commit
|
commitdiff
|
tree
2018-04-21
Paul Bauer
Interm
e
d
iate commit to track
c
hanges to manu
a
l
commit
|
commitdiff
|
tree
2018-04-18
Paul Bau
e
r
R
e
move obso
l
ete
v
a
riable pre
c
gr
o
f
ile o
u
tput
commit
|
commitdiff
|
tree
2018-04-17
Paul B
a
uer
F
ix lega
c
y topolog
y
memory erro
r
commit
|
commitdiff
|
tree
2018-03-29
Paul
Ba
u
e
r
Fix c
m
ake Sphinx detection
f
or versions >1
.
6
.
4
commit
|
commitdiff
|
tree
2018-03-16
Paul B
a
u
er
O
nl
y
free
topo
l
ogy when al
l
ocated
commit
|
commitdiff
|
tree
2018-02-26
P
a
ul Bauer
Cha
n
ge T
N
G file opening
commit
|
commitdiff
|
tree
2018-02-01
Paul Bau
e
r
Add information f
o
r n2t
file f
o
rmat
commit
|
commitdiff
|
tree
2018-01-18
Pa
u
l Bauer
Add contribution informa
t
ion to webpage
commit
|
commitdiff
|
tree
2018-01-04
Paul Bau
e
r
F
i
x gmx msd w
h
e
n using COM r
e
moval and mole
c
ules
commit
|
commitdiff
|
tree
2018-01-03
Paul Bauer
C
orr
e
c
t di
h
edral restraint section in Manual
commit
|
commitdiff
|
tree
2017-12-19
Paul Bauer
Removed -skip option f
r
o
m
g
m
x en
e
r
gy
commit
|
commitdiff
|
tree
2017-12-14
Paul Bauer
Remove P
B
C
be
f
ore
ge
n
era
t
ing TPR with group scheme
commit
|
commitdiff
|
tree
2017-12-11
P
a
u
l Bauer
Fewer messages whe
n
-cpi f
i
le is not p
r
esent
commit
|
commitdiff
|
tree
2017-12-11
Paul
Bauer
Disal
l
ow
c
o
mbin
a
ti
o
n of PME-user and
v
erlet cutoff
commit
|
commitdiff
|
tree
2017-12-08
P
a
u
l
Bauer
Add
i
nformation regarding xlc
c
ompi
l
er
commit
|
commitdiff
|
tree
2017-11-27
Pau
l
Ba
u
er
Add
G
P
U
task inform
a
ti
o
n to user-guide
commit
|
commitdiff
|
tree
2017-11-21
Paul Ba
u
e
r
First general ad
d
itions to the doc
u
mentat
i
on
commit
|
commitdiff
|
tree
2017-11-01
P
a
ul Bauer
Small change to LaTeX manu
a
l gen
e
r
a
tion
commit
|
commitdiff
|
tree
2017-11-01
P
a
ul Bauer
Fixing missing references in web d
o
cum
e
nta
t
ion
commit
|
commitdiff
|
tree
2017-10-11
Pau
l
Bauer
Change to
m
odules fo
r
build
of we
b
doc
u
mentation
commit
|
commitdiff
|
tree