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Remove selection help from SelectionCollection
2014-07-08
Teemu
M
urtola
Remove selection help from SelectionCol
l
ection
commit
|
commitdiff
|
tree
2014-07-08
T
eemu Murtola
Make do
c
-check pass a
g
ain without warni
n
gs
commit
|
commitdiff
|
tree
2014-07-05
Teemu
M
urtola
Merge release-5-0 into master
commit
|
commitdiff
|
tree
2014-06-30
Tee
m
u Murtola
Merge releas
e
-5-
0
int
o
mas
t
er
commit
|
commitdiff
|
tree
2014-06-28
Te
e
mu Murto
l
a
Remove
overeager sele
c
t
ion index group che
c
k
commit
|
commitdiff
|
tree
2014-06-21
Teemu Murto
l
a
Convert checkpoint
.
c to C++ c
o
mpilation
commit
|
commitdiff
|
tree
2014-06-07
Teemu
M
urtola
C
lean up FileNameOptionStorage implementation
commit
|
commitdiff
|
tree
2014-06-07
Teem
u
M
u
rt
o
la
Move inde
x
.
*
t
o
topology/
commit
|
commitdiff
|
tree
2014-06-03
Mark Abraha
m
Convert r
e
p
l_ex
.
c to C+
+
commit
|
commitdiff
|
tree
2014-06-02
Teemu Mur
t
ol
a
M
ove atomprop
.
*
to topology
/
commit
|
commitdiff
|
tree
2014-05-31
T
ee
m
u Murto
l
a
Move mt
o
p_util
.
*
a
n
d
top
s
o
rt
.
*
to
t
opology/
commit
|
commitdiff
|
tree
2014-05-29
T
ee
m
u Murto
l
a
Remove
more uses
of typedefs
.
h
commit
|
commitdiff
|
tree
2014-05-25
Teemu Murtola
Mov
e
g
e
n
e
ral fu
n
ctions ou
t
of typedefs
.
h
commit
|
commitdiff
|
tree
2014-05-25
T
e
emu Murtol
a
Remove some
typede
f
s
.
h
d
ependencies
commit
|
commitdiff
|
tree
2014-05-25
Teemu Murt
o
la
Move types/to
p
ology
.
h to topology/
commit
|
commitdiff
|
tree
2014-05-24
Teem
u
Murtola
Mo
v
e
types/id
e
f
.
h to topol
o
gy/
commit
|
commitdiff
|
tree
2014-05-21
Teemu Murtola
Move m
s
hift
.
* to pbcutil/
commit
|
commitdiff
|
tree
2014-05-21
Teem
u
Murtola
Me
r
ge t_
g
raph definition int
o
mshift
.
h
commit
|
commitdiff
|
tree
2014-05-18
Teemu Murtola
Clean
u
p
matio
.
*
commit
|
commitdiff
|
tree
2014-05-17
T
eemu Mu
r
tola
M
o
re elabo
r
a
t
e
default handling f
o
r
F
i
l
eNameOp
t
i
o
n
commit
|
commitdiff
|
tree
2014-05-01
Teemu Murtola
Fix
i
n
c
orre
c
t limits
in F
l
oatOption
S
torage
commit
|
commitdiff
|
tree
2014-04-27
T
e
emu Murtola
Move 'real' definiti
o
n t
o
utility/rea
l
.
h
commit
|
commitdiff
|
tree
2014-04-16
Teem
u
Murt
o
la
R
emove
u
nuse
d
minvert
.
h
commit
|
commitdiff
|
tree
2014-04-13
Teemu Murtola
R
e
move unused shif
t
.
h
commit
|
commitdiff
|
tree
2014-04-08
Te
e
m
u Murtol
a
Version bump for post-5
.
0
d
ev
e
lopme
n
t
commit
|
commitdiff
|
tree
2014-04-04
Teemu Murtola
R
e
m
o
v
e a
n
cient S
G
I-specific c
o
de
commit
|
commitdiff
|
tree
2014-04-04
Teemu Murtola
C
lean up
gmx_
f
atal
.
*
commit
|
commitdiff
|
tree
2014-03-30
Teemu Murtola
Clean up string
2
.
h-r
e
lated include
s
commit
|
commitdiff
|
tree
2014-03-27
Teemu Murtol
a
M
ove include depend
e
ncy checks to doc-check
commit
|
commitdiff
|
tree
2014-03-27
Teem
u
Murtola
Better
a
utoma
t
e
d
Dox
y
gen docu
m
entation c
h
eck
e
r
commit
|
commitdiff
|
tree
2014-03-27
Teemu Murt
o
la
Misc
.
Doxygen fixes
commit
|
commitdiff
|
tree
2014-03-27
T
e
emu
Mu
r
tola
Mov
e
thread_mpi
t
o
src/e
x
ter
n
al/
commit
|
commitdiff
|
tree
2014-03-24
Teemu M
u
rtola
Re
m
ove
gmxpreproc
e
s
s from incl
u
de path
commit
|
commitdiff
|
tree
2014-03-08
T
e
e
m
u Murtola
Remov
e
s
o
me unnecessary
d
ecl
a
r
a
t
ions
commit
|
commitdiff
|
tree
2014-02-28
Tee
m
u
Murtola
Residual SIMD Dox
y
g
e
n impr
o
veme
n
ts
commit
|
commitdiff
|
tree
2014-02-28
Teemu Murtola
M
isc
.
D
o
x
y
gen c
o
nfi
g
urati
o
n change
s
commit
|
commitdiff
|
tree
2014-02-26
Teemu Murtola
Fix GMX_P
R
I
u
32 and GMX_PRIu64 for MSVC
commit
|
commitdiff
|
tree
2014-02-25
Mar
k
A
b
raham
Keep compilers happy
on BG/Q
commit
|
commitdiff
|
tree
2014-02-15
Teemu Murtola
Fix some
b
roken l
i
n
k
s i
n
HTML pages
commit
|
commitdiff
|
tree
2014-02-09
Tee
m
u
M
ur
t
o
l
a
Sh
e
ll complet
i
ons
through
Opti
o
ns
commit
|
commitdiff
|
tree
2014-02-03
Mar
k
Abraham
Add hack to f
i
x genbox
commit
|
commitdiff
|
tree
2014-02-02
Teemu Murtola
Extend
v
al
g
rind su
p
pressions for Open
M
PI
commit
|
commitdiff
|
tree
2014-01-30
Teemu M
u
rtola
Overview docs for us
i
ng Gro
m
acs as a library
commit
|
commitdiff
|
tree
2014-01-30
Teemu Murtola
R
ename ProgramInfo to Comman
d
L
ineProgramConte
x
t
commit
|
commitdiff
|
tree
2014-01-29
T
eem
u
M
u
rto
l
a
Print common options to 'gmx -h'
commit
|
commitdiff
|
tree
2014-01-22
T
eemu Murtola
Use local ProgramIn
f
o
i
n CommandLineModuleMa
n
ager
commit
|
commitdiff
|
tree
2014-01-21
Teemu Murtola
Remove
unused split
.
h
commit
|
commitdiff
|
tree
2014-01-20
Teemu Murtola
Fix test refe
r
enc
e
d
ata
commit
|
commitdiff
|
tree
2014-01-05
T
eemu
M
urtola
Support for defa
u
lt values for SelectionOpt
i
on
commit
|
commitdiff
|
tree
2013-12-30
Teemu Murtola
More robust shel
l
dete
c
tion in GMXRC
commit
|
commitdiff
|
tree
2013-12-29
Teem
u
Murtola
Minor vec
.
h cle
a
nup
commit
|
commitdiff
|
tree
2013-12-24
Teemu Murtola
Get rid of
s
et_def
a
ult_file_name()
commit
|
commitdiff
|
tree
2013-12-24
Rol
a
nd
Schulz
Rename remaining large_int to int64
commit
|
commitdiff
|
tree
2013-12-23
Rol
a
nd
S
chulz
Re
p
lace
g
mx_l
a
r
ge_int_t with gmx_int64
_
t
commit
|
commitdiff
|
tree
2013-12-16
E
r
ik Li
n
d
a
hl
Moved OpenM
P
detection
to s
e
p
a
r
ate
f
ile
.
commit
|
commitdiff
|
tree
2013-12-08
Teemu
M
urtola
Do
n
'
t
c
re
a
te symlinks in
the bui
l
d tre
e
commit
|
commitdiff
|
tree
2013-12-04
Teemu Murtola
Fix test
b
u
ild with GMX_BUILD_MDRUN_
O
NLY
commit
|
commitdiff
|
tree
2013-11-29
Berk Hess
C
r
eated
S
IMD m
o
d
ul
e
commit
|
commitdiff
|
tree
2013-11-20
Teemu
Mur
t
ola
Update
c
opyrigh
t
h
ea
d
e
rs in k
e
r
nels
.
commit
|
commitdiff
|
tree
2013-11-20
Teemu Murtola
Update copyri
g
ht h
e
aders in ge
n
erated kernels
.
commit
|
commitdiff
|
tree
2013-11-20
T
eemu Murt
o
la
Script to automatically update copy
r
ight
commit
|
commitdiff
|
tree
2013-11-17
T
e
e
m
u M
u
rtola
Reformat ex
i
sting LGPL copyright notices
.
commit
|
commitdiff
|
tree
2013-10-30
Alex
e
y S
h
v
e
tsov
g
r
om
a
cs cpp: clean up -Wunused-parameter
w
arning
s
commit
|
commitdiff
|
tree
2013-10-18
Teemu
Murt
o
la
Upgrade
layout file to sup
p
ort Doxyg
e
n >=
1
.
8
.
commit
|
commitdiff
|
tree
2013-10-07
Teemu Murt
o
la
Improve ma
r
kup s
u
b
s
tituti
o
n in HelpWrit
e
rContext
.
commit
|
commitdiff
|
tree
2013-09-28
Teem
u
M
urtola
Us
e
gi
t
versio
n
in
f
o
i
n Doxy
g
en
.
commit
|
commitdiff
|
tree
2013-09-24
Teemu M
u
rtola
Remove old gener
a
ted HTML f
i
le
s
.
commit
|
commitdiff
|
tree
2013-09-24
Teemu
Murtola
Remove src/contrib/prfn
.
c and re
l
a
ted code
.
commit
|
commitdiff
|
tree
2013-09-23
T
e
emu Murtola
Remove obsolete tools
.
commit
|
commitdiff
|
tree
2013-09-20
Teemu Murtola
Merge b
r
anch 'rel
e
a
se-4-
6
'
commit
|
commitdiff
|
tree
2013-09-06
Teemu M
u
r
t
ola
Suppo
r
t for paralle
l
data modules
.
commit
|
commitdiff
|
tree
2013-08-24
Tee
m
u
M
urtola
[
RFC] Real
l
y uniform sta
r
tup
p
ath for al
l
bi
n
ari
e
s
.
commit
|
commitdiff
|
tree
2013-07-22
Teemu Mu
r
tola
Fix Doxyge
n
warnings
.
commit
|
commitdiff
|
tree
2013-07-21
Teemu Murtola
More files to C++
.
commit
|
commitdiff
|
tree
2013-06-28
Teemu Murtola
Fix
o
v
ereage
r
VdW ra
d
ii c
h
ange note
.
commit
|
commitdiff
|
tree
2013-06-27
Te
e
mu Mur
t
ola
Pro
p
er C++ A
P
I for anal
y
sis neighbo
r
hoo
d
search
.
commit
|
commitdiff
|
tree
2013-06-27
T
e
em
u
Murt
o
la
Fix s
o
me issues
f
o
un
d
by cppch
e
ck-1
.
58
.
commit
|
commitdiff
|
tree
2013-06-27
Teem
u
Murtola
More binaries
i
nto
the wr
a
pper binary
.
commit
|
commitdiff
|
tree
2013-05-24
Teemu
Murtola
M
e
r
g
e
branch
'
releas
e
-4-6'
commit
|
commitdiff
|
tree
2013-04-19
Tee
m
u
M
urtola
Merge
b
ranc
h
'release-4
-
5-patches
'
commit
|
commitdiff
|
tree
2013-04-10
Teemu M
u
rto
l
a
F
i
x
ano
t
h
er bug
in selec
t
ion sub
e
x
pre
s
sion
handling
.
commit
|
commitdiff
|
tree
2013-04-10
Teemu Murtola
Fix b
u
g in selection subexpressi
o
n handlin
g
.
commit
|
commitdiff
|
tree
2013-04-10
Teemu
Murtol
a
Fix an
o
ther b
u
g
in selecti
o
n su
b
e
x
pres
s
ion handlin
g
.
commit
|
commitdiff
|
tree
2013-04-07
Teemu Murtola
Fix bug in selection s
u
bexpre
s
sion handling
.
commit
|
commitdiff
|
tree
2013-03-26
Teem
u
Murtola
Im
p
r
ove master-specific C
M
a
k
e behavior
.
commit
|
commitdiff
|
tree
2013-03-26
Teem
u
Murtola
Add
histogram output f
o
r 'gmx
g
angle
'
.
commit
|
commitdiff
|
tree
2013-03-24
Teemu Murtola
Merg
e
libgmxana
i
n
to libgromacs
.
commit
|
commitdiff
|
tree
2013-03-08
T
e
emu Murtol
a
Be
t
ter te
s
t assertions for exceptions
.
commit
|
commitdiff
|
tree
2013-03-07
Teem
u
Murtola
Improv
e
e
n
u
m option interface
.
commit
|
commitdiff
|
tree
2013-03-07
Teemu Mu
r
tola
More flexible handling
o
f enum option des
c
r
i
ptions
.
commit
|
commitdiff
|
tree
2013-03-07
Teemu Mu
r
tol
a
Fix
c
op
y
right
not
i
ces for
new C+
+
c
ode
.
commit
|
commitdiff
|
tree
2013-03-07
Teemu
M
urtola
Update my e-mail a
d
dress
o
n author
l
i
n
e
s
.
commit
|
commitdiff
|
tree
2013-02-25
Teemu Murtol
a
Uncrusti
f
y template
.
cpp and selection
.
cpp
.
commit
|
commitdiff
|
tree
2013-02-10
Teemu Murtola
Manual reform
a
tting in preparat
i
o
n
for uncrustify
.
commit
|
commitdiff
|
tree
2013-01-13
Teemu Murtola
R
e
m
o
v
e
unu
s
ed bfunc
.
h
.
commit
|
commitdiff
|
tree
2012-12-30
Teemu Murt
o
la
Rem
o
ve non-
f
u
n
ction
a
l Pow
e
rPC in
v
sq
r
t
.
commit
|
commitdiff
|
tree
2012-12-30
Teemu M
u
r
t
ola
Re
m
ove super
f
luous
m
emo
r
y
a
l
l
ocation
.
commit
|
commitdiff
|
tree
2012-12-21
Teemu Mur
t
ola
Make gmx_cpuid
.
h self-sta
n
ding
.
commit
|
commitdiff
|
tree
2012-12-21
Teemu Murtola
R
e
move non-functional
c
ompiler
o
ver
r
ide
for Ma
c
OSX
.
commit
|
commitdiff
|
tree
2012-12-17
Teemu
M
urtola
F
i
x l
i
cen
s
e text printed
b
y progra
m
s
.
commit
|
commitdiff
|
tree
next