Build.PL

   1 #!/usr/bin/perl -w
   2
   3 # This is a Module::Build script for bioperl-run installation.
   4 # See http://search.cpan.org/~kwilliams/Module-Build/lib/Module/Build.pm
   5
   6 # Uses a custom subclass of Module::Build called Bio::Root::Build
   7
   8 use strict;
   9 my $v = '1.006900'; # pre-1.7, requires bioperl-live main trunk
  10 eval "use Bio::Root::Build $v";
  11 if ($@) {
  12     # using die so wrappers can catch the error message
  13     die "BioPerl minimal core version $v is required for BioPerl-run\n";
  14 }
  15
  16 # Set up the Bio::Root::Build object
  17 my $build = Bio::Root::Build->new(
  18     module_name         => 'Bio',
  19     dist_name           => 'BioPerl-run',
  20     dist_version        => $v,
  21     dist_author         => 'BioPerl Team <bioperl-l@bioperl.org>',
  22     dist_abstract       => 'BioPerl-run - wrapper toolkit',
  23     license             => 'perl',
  24     requires            => {
  25                             'perl'                      => '5.6.1',
  26                             #'Bio::Root::Version'        => '1.007000' # checked above
  27                            },
  28     recommends          => {
  29                             'Algorithm::Diff'           => '0/generating consensus protein family descriptions/Bio::Tools::Run::TribeMCL',
  30                             'IPC::Run'                  => '0/Glimmer and Genemark application wrappers'.
  31                                                            '/Bio::Tools::Run::Glimmer,Bio::Tools::Run::Genemark',
  32                             'IO::String'                => '0/generating Bio::Tree::Tree from strings/Bio::Tools::Run::Phylo::Phylip::Consense',
  33                             'XML::Twig'                 => '0/processing XML data/Bio::Tools::Run::EMBOSSacd'
  34                            },
  35     get_options         => {
  36                             network => { } # say 'perl Build.PL --network' to manually request network tests
  37                            },
  38     auto_features       => {
  39                             Network               => {
  40                                                         description => "Enable tests that need an internet connection",
  41                                                         requires    => { 'LWP::UserAgent' => 0 },
  42                                                         test        => \&Bio::Root::Build::test_internet
  43                                                      }
  44                            },
  45     dynamic_config      => 1,
  46     create_makefile_pl  => 'passthrough'
  47
  48     #pm_files           => {} # modules in Bio are treated as if they were in lib and auto-installed
  49     #script_files       => [] # scripts in scripts directory are installed on-demand
  50 );
  51
  52 my $accept = $build->args->{accept};
  53
  54 # Ask questions
  55 $build->choose_scripts;
  56 {
  57     if ($build->args('network')) {
  58         if ($build->feature('Network')) {
  59             $build->notes(network => 1);
  60             $build->log_info("  - will run internet-requiring tests\n");
  61         }
  62         else {
  63             $build->notes(network => 0);
  64             $build->log_info("  - will not run network tests since I seem to be missing essential network functionality\n");
  65         }
  66     }
  67     else {
  68         $build->prompt_for_network($accept) if $build->feature('Network');
  69     }
  70 }
  71
  72 # Create the build script and exit
  73 $build->create_build_script;
  74
  75 exit;