repo.or.cz
/
bioperl-live.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
Sync with trunk
2009-01-05
cjfields
S
y
nc with
t
r
unk
commit
|
commitdiff
|
tree
2009-01-04
cjfields
s
y
nc with trunk
commit
|
commitdiff
|
tree
2009-01-02
cjfields
sync from trunk
commit
|
commitdiff
|
tree
2009-01-02
cjfields
sync la
s
t
c
ommit
commit
|
commitdiff
|
tree
2009-01-02
c
j
f
ields
sync with
HEAD
commit
|
commitdiff
|
tree
2009-01-02
cjf
i
elds
Remove t/Graphics
commit
|
commitdiff
|
tree
2009-01-02
cjfields
Remove Bio
:
:Graphics examp
l
es and scripts
commit
|
commitdiff
|
tree
2008-12-26
cjfields
empty di
r
ect
o
ry
commit
|
commitdiff
|
tree
2008-12-26
cj
f
i
elds
Empty
d
irec
t
ory
commit
|
commitdiff
|
tree
2008-12-26
cjfield
s
empty dire
c
to
r
y
commit
|
commitdiff
|
tree
2008-12-26
cjfi
e
lds
sync with trun
k
commit
|
commitdiff
|
tree
2008-12-24
cjfields
small clarification
commit
|
commitdiff
|
tree
2008-12-24
cjfield
s
A
dd list of bugs slated for the 1
.
6
.
x series
commit
|
commitdiff
|
tree
2008-12-24
cjfields
Updates
f
or
R
C1
commit
|
commitdiff
|
tree
2008-12-24
c
j
fields
r
emove Microarray
d
eps
commit
|
commitdiff
|
tree
2008-12-24
c
j
f
ields
Small fix fo
r
tests JIC there is a net
w
ork error
commit
|
commitdiff
|
tree
2008-12-24
cjfields
Sync
branch with
trunk
commit
|
commitdiff
|
tree
2008-12-24
c
j
fields
Remo
v
e Bi
o
::Micr
o
array from branch (s
t
i
ll in development
.
.
.
commit
|
commitdiff
|
tree
2008-12-24
cjfie
l
ds
Remove (merge didn
'
t remove
this for some
re
a
son)
commit
|
commitdiff
|
tree
2008-12-24
c
jfields
Remove (merge didn't re
m
o
ve this for som
e
re
a
son
)
commit
|
commitdiff
|
tree
2008-12-22
cjf
i
e
lds
sync trunk with branch
commit
|
commitdiff
|
tree
2008-12-20
cjfi
e
lds
5
.
6
.
1 is min per
l
versi
o
n requ
i
re
d
for all core
modules now
commit
|
commitdiff
|
tree
2008-12-19
cjfi
e
lds
updat
e
NAMES
commit
|
commitdiff
|
tree
2008-12-19
cjfields
s
m
al
l
t
y
p
o
commit
|
commitdiff
|
tree
2008-12-18
c
jfields
typo
commit
|
commitdiff
|
tree
2008-12-18
cjf
i
elds
[bug 2
7
14]
commit
|
commitdiff
|
tree
2008-12-17
cjfields
f
i
x
test
number
commit
|
commitdiff
|
tree
2008-12-17
cjfields
upd
a
te Test::Warn (fi
x
e
s
Qual
.
t t
e
st
p
roblems with
.
.
.
commit
|
commitdiff
|
tree
2008-12-16
cjfie
l
ds
missed one
commit
|
commitdiff
|
tree
2008-12-16
cjfield
s
EUti
l
i
ti
e
s remote test
s
back o
n
li
n
e
(s
i
mp
l
e tests only)
commit
|
commitdiff
|
tree
2008-12-16
cjfields
EUtilit
i
es
r
emote
t
ests back online
(
simp
l
e tests only
)
commit
|
commitdiff
|
tree
2008-12-16
c
j
fields
You must a
c
tually test data if you
w
ant th
i
s mod
u
le
.
.
.
commit
|
commitdiff
|
tree
2008-12-16
cjfields
Don't us
e
print
!
C
han
g
ing
t
o
$self->debug or
c
ommenting out
commit
|
commitdiff
|
tree
2008-12-16
cjfields
Bio::Graph depre
c
ated in 1
.
6
commit
|
commitdiff
|
tree
2008-12-16
cjfield
s
stifle warnings when pas
s
ing string in
s
tead of integer
commit
|
commitdiff
|
tree
2008-12-16
c
jfi
e
lds
h
a
sh ref, not array re
f
commit
|
commitdiff
|
tree
2008-12-16
c
j
f
i
elds
[bug 2637]
commit
|
commitdiff
|
tree
2008-12-16
cjfi
e
lds
[bug 2637]
commit
|
commitdiff
|
tree
2008-12-16
cjfields
[bug 2637
]
commit
|
commitdiff
|
tree
2008-12-16
cjfiel
d
s
[bu
g
2637]
commit
|
commitdiff
|
tree
2008-12-15
cjfields
[bug 2637]
commit
|
commitdiff
|
tree
2008-12-15
cjfields
[bug 2712]
commit
|
commitdiff
|
tree
2008-12-15
cjfields
s
c
or
e
s
commit
|
commitdiff
|
tree
2008-12-15
cjfie
l
ds
remaining
tests for Bio::
T
ool:
:
EUtil
i
ties
commit
|
commitdiff
|
tree
2008-12-15
cjfields
more test data
commit
|
commitdiff
|
tree
2008-12-15
cjfields
Upd
a
tes:
commit
|
commitdiff
|
tree
2008-12-13
cjfiel
d
s
initia
l
batch of EUtilParame
t
ers tests
commit
|
commitdiff
|
tree
2008-12-13
cjfields
einfo tests
commit
|
commitdiff
|
tree
2008-12-12
c
jfields
some
E
Utilities tests (
p
ars
i
n
g f
r
om
files)
commit
|
commitdiff
|
tree
2008-12-12
cjfie
l
ds
some tes
t
data
for Bio::Tools
:
:EUtilities
commit
|
commitdiff
|
tree
2008-12-12
cj
f
ields
updates
t
o
E
U
tilities (getting
read
y
f
o
r d
o
c
s
, tests
.
.
.
commit
|
commitdiff
|
tree
2008-12-12
cjfields
Mo
v
e
E
UtilPar
a
mete
r
s to Tools (seems more ap
p
r
o
pri
a
te)
commit
|
commitdiff
|
tree
2008-12-11
cjfields
fix
f
or bug
w
hen getting cached respons
e
w
ith fi
l
ename
.
.
.
commit
|
commitdiff
|
tree
2008-12-11
cjfields
smal
l
pointer to
w
iki p
a
ge (will upd
a
te along with
.
.
.
commit
|
commitdiff
|
tree
2008-12-11
cjfi
e
lds
s
m
a
l
l update
commit
|
commitdiff
|
tree
2008-12-11
cjfields
upd
a
tes
commit
|
commitdiff
|
tree
2008-12-11
cjfields
return, not 'r
e
turn undef'
commit
|
commitdiff
|
tree
2008-12-11
c
j
f
ields
return,
not '
r
eturn
u
n
d
ef'
commit
|
commitdiff
|
tree
2008-12-11
cj
f
ields
[bug 2699]
commit
|
commitdiff
|
tree
2008-12-11
c
j
f
iel
d
s
[bu
g
2699]
commit
|
commitdiff
|
tree
2008-12-11
cjfields
[bug 2707]
commit
|
commitdiff
|
tree
2008-12-10
cjfie
l
ds
Remo
v
ing from HEAD (deprecat
e
d
for
1
.
6)
commit
|
commitdiff
|
tree
2008-12-10
cjf
i
elds
mini p
o
d
fi
x
commit
|
commitdiff
|
tree
2008-12-10
cjfields
u
p
da
t
e de
p
r
e
cat
i
o
n
l
i
st
commit
|
commitdiff
|
tree
2008-12-10
cjfields
remove Bio:
:
Graphics
(s
e
parat
e
package now)
commit
|
commitdiff
|
tree
2008-12-10
cjfiel
d
s
[bug 2
6
37]
commit
|
commitdiff
|
tree
2008-12-10
cjfield
s
R
e
move dependencies for
B
io::
G
ra
p
hics a
n
d deprecated
.
.
.
commit
|
commitdiff
|
tree
2008-12-09
cjfields
Squash warning
commit
|
commitdiff
|
tree
2008-12-09
cjfields
diag
(
) only on ver
b
ose
commit
|
commitdiff
|
tree
2008-12-09
cjfi
e
lds
Fix last loop tests, move some to
c
an
_
ok
commit
|
commitdiff
|
tree
2008-12-09
cjfields
Modi
f
y
to test new temp c
l
asses
and ensu
r
e th
a
t a
d
ded
.
.
.
commit
|
commitdiff
|
tree
2008-12-09
cjfield
s
u
p
date Maur
i
cio's email
commit
|
commitdiff
|
tree
2008-12-08
c
j
f
ields
Up
d
ate Roy's email
commit
|
commitdiff
|
tree
2008-12-08
cjfields
Roy's emai
l
(and bi
o
perl
.
org not bioperl
.
edu)
commit
|
commitdiff
|
tree
2008-12-08
cjfields
Updated emails
commit
|
commitdiff
|
tree
2008-12-07
c
j
fields
[bug
2699]
commit
|
commitdiff
|
tree
2008-12-05
cjfields
Need to retrieve the tree for
output
commit
|
commitdiff
|
tree
2008-12-05
c
j
field
s
[bug 2450]
commit
|
commitdiff
|
tree
2008-12-04
cjfield
s
Make Target a true D
B
Link
commit
|
commitdiff
|
tree
2008-12-04
cjfields
Directory i
s
no long
e
r needed (He
i
k
k
i
split thi
s
up
.
.
.
commit
|
commitdiff
|
tree
2008-12-03
cjfields
a
dd force_nse
t
ests
commit
|
commitdiff
|
tree
2008-12-03
cjfield
s
leav
e
ID und
e
f
i
ned if it isn't present,
b
ut
al
l
ow
the
.
.
.
commit
|
commitdiff
|
tree
2008-12-03
c
jfields
Remove files acci
d
ently added from last commit
commit
|
commitdiff
|
tree
2008-12-03
cjfield
s
Reo
r
ganize Tool
s
t
e
sts (n
e
eds so
m
e m
o
r
e
splitting)
commit
|
commitdiff
|
tree
2008-12-03
cjfields
Remove
(t
e
st
s
ar
e
redund
a
nt, i
n
Conse
d
.
t)
commit
|
commitdiff
|
tree
2008-12-03
cjfields
Merge
t
ests and
r
emove redundant file
commit
|
commitdiff
|
tree
2008-12-03
cjfie
l
ds
Up
d
ate tes
t
count
commit
|
commitdiff
|
tree
2008-12-03
cjfields
Merge
t
ests
commit
|
commitdiff
|
tree
2008-12-03
cjf
i
e
ld
s
Rem
o
ve redundant file
commit
|
commitdiff
|
tree
2008-12-03
cjfi
e
lds
R
e
m
ove old files
commit
|
commitdiff
|
tree
2008-12-03
c
j
fields
St
a
rt Tools move
commit
|
commitdiff
|
tree
2008-12-03
cjf
i
elds
smal
l
updates:
commit
|
commitdiff
|
tree
2008-12-03
cjfields
forgo
t
to i
n
crement test count
commit
|
commitdiff
|
tree
2008-12-03
c
jfiel
d
s
Add a coupl
e
of tests for seq_id (sm
a
l
l
b
ut s
i
gn
i
f
i
c
ant
.
.
.
commit
|
commitdiff
|
tree
2008-12-02
cjfields
[bug 2450]
commit
|
commitdiff
|
tree
2008-12-02
cjfields
[bug 2450]
commit
|
commitdiff
|
tree
2008-12-02
cj
f
ields
[b
u
g 24
5
0]
commit
|
commitdiff
|
tree
2008-12-02
cjfields
[
b
u
g 2450]
commit
|
commitdiff
|
tree
2008-12-02
cjfields
s
o
me pod updates
commit
|
commitdiff
|
tree
2008-12-02
cjfields
[bug 2450]
commit
|
commitdiff
|
tree
next