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remove odd miscommit from tag
2009-09-25
cjfields
r
emove odd miscommit from ta
g
commit
|
commitdiff
|
tree
2009-09-25
cjfields
ta
g
f
o
urth (and hopefully la
s
t) alpha
commit
|
commitdiff
|
tree
2009-09-22
cjfields
sync that last
b
i
t
commit
|
commitdiff
|
tree
2009-09-22
cjfields
sync with main
trunk, bump
v
ersi
o
n t
o
alpha
3
commit
|
commitdiff
|
tree
2009-09-22
cjfields
merg
e
o
ver test fix
e
s m
i
ssed in pr
e
vious merge (fo
u
nd
.
.
.
commit
|
commitdiff
|
tree
2009-09-22
c
jfields
remove from bran
c
h
commit
|
commitdiff
|
tree
2009-09-22
cjfields
s
y
nc with main trunk
commit
|
commitdiff
|
tree
2009-09-18
cjfields
sync with main
t
r
unk
commit
|
commitdiff
|
tree
2009-09-18
cj
f
iel
d
s
syn
c
w/ ma
i
n trunk
,
bu
m
p al
p
h
a v
e
rs
i
on
commit
|
commitdiff
|
tree
2009-09-17
cjfields
sy
n
c last bits with m
a
i
n
t
r
u
n
k
commit
|
commitdiff
|
tree
2009-09-16
cjf
i
el
d
s
bump
t
o al
p
h
a
1
commit
|
commitdiff
|
tree
2009-09-16
cjfields
sync w
i
th mai
n
trunk
commit
|
commitdiff
|
tree
2009-09-15
cj
f
i
e
l
ds
sync
w
ith mai
n
trunk compl
e
tely
(a few t
e
s
ts failing)
commit
|
commitdiff
|
tree
2009-09-15
cjfields
sync with trunk (t
o
r
15946)
commit
|
commitdiff
|
tree
2009-09-15
cjfiel
d
s
s
y
n
c with trunk to r156
8
4
commit
|
commitdiff
|
tree
2009-04-14
cjfiel
d
s
sync w/ m
a
in trunk
commit
|
commitdiff
|
tree
2009-02-05
cjfields
s
ync with ma
i
n
trunk HEAD
commit
|
commitdiff
|
tree
2009-01-24
c
j
fi
e
lds
*
r
eve
r
t r15441 for the t
i
me being (SeqF
e
atur
e
.
t tests
.
.
.
commit
|
commitdiff
|
tree
2009-01-24
cjfields
B
u
mp version to 1
.
6 for final relea
s
e
.
commit
|
commitdiff
|
tree
2009-01-21
cjfields
s
yn
c
last commit
commit
|
commitdiff
|
tree
2009-01-21
cjfields
* sync with trunk
commit
|
commitdiff
|
tree
2009-01-21
cjf
i
elds
* sync with trunk
commit
|
commitdiff
|
tree
2009-01-21
cjfield
s
* d
e
le
t
e
B
io::DB::SeqFeature:
:
Store
:
:
D
BI::Pg pe
r
Scott
.
.
.
commit
|
commitdiff
|
tree
2009-01-20
cjf
i
elds
sync with main tr
u
nk
commit
|
commitdiff
|
tree
2009-01-16
cjfiel
d
s
Inc
.
RC ve
r
si
o
n
commit
|
commitdiff
|
tree
2009-01-16
cjfi
e
ld
s
c
a
rry over test fixes from
t
r
unk
commit
|
commitdiff
|
tree
2009-01-16
cjfields
Ca
r
ry over test cha
n
ge from mai
n
trunk
commit
|
commitdiff
|
tree
2009-01-16
cjfields
Sync with main
t
r
u
nk
commit
|
commitdiff
|
tree
2009-01-13
cjfields
S
ync
w
ith main t
r
unk
commit
|
commitdiff
|
tree
2009-01-13
c
j
fields
Syn
c
with main t
r
unk
commit
|
commitdiff
|
tree
2009-01-06
c
j
fie
l
ds
Sync with tr
u
n
k
.
Thi
s
will a
p
pear
in fina
l
rele
a
se
.
commit
|
commitdiff
|
tree
2009-01-06
cjf
i
elds
Res
o
lve co
n
flict
(
c
an't directly merge since
trunk
.
.
.
commit
|
commitdiff
|
tree
2009-01-06
cjf
i
elds
Syn
c
that
last bit with trunk
.
I'll have to merg
e
.
.
.
commit
|
commitdiff
|
tree
2009-01-06
cjfields
Sync with trun
k
commit
|
commitdiff
|
tree
2009-01-05
cjfields
Bump RC to 2; will ta
g
, b
a
g, an
d
ship tomorrow a
f
ter
.
.
.
commit
|
commitdiff
|
tree
2009-01-05
cjf
i
eld
s
Sync
w
ith tr
u
nk
commit
|
commitdiff
|
tree
2009-01-04
cjfields
sync wi
t
h
trunk
commit
|
commitdiff
|
tree
2009-01-02
cjfields
sy
n
c from trunk
commit
|
commitdiff
|
tree
2009-01-02
c
j
f
ields
sync l
a
st co
m
mit
commit
|
commitdiff
|
tree
2009-01-02
cjfields
sync
w
ith HEAD
commit
|
commitdiff
|
tree
2009-01-02
cjfie
l
ds
R
e
move t/Grap
h
ics
commit
|
commitdiff
|
tree
2009-01-02
cjfields
Remove Bio::Graphics examp
l
e
s
and scripts
commit
|
commitdiff
|
tree
2008-12-26
c
j
fields
empty direc
t
ory
commit
|
commitdiff
|
tree
2008-12-26
cjfields
E
m
p
ty directory
commit
|
commitdiff
|
tree
2008-12-26
cjfields
empty directory
commit
|
commitdiff
|
tree
2008-12-26
cjfields
sync
with tr
u
nk
commit
|
commitdiff
|
tree
2008-12-24
c
j
fiel
d
s
small
c
l
a
rificatio
n
commit
|
commitdiff
|
tree
2008-12-24
cjfields
Add
l
i
st of bu
g
s s
l
ate
d
for th
e
1
.
6
.
x series
commit
|
commitdiff
|
tree
2008-12-24
cjfie
l
d
s
Updates fo
r
RC1
commit
|
commitdiff
|
tree
2008-12-24
cjf
i
eld
s
remove Mic
r
oarray deps
commit
|
commitdiff
|
tree
2008-12-24
cjfields
Sm
a
ll
f
ix for tests JIC there is a network error
commit
|
commitdiff
|
tree
2008-12-24
cjfields
S
ync branch with trunk
commit
|
commitdiff
|
tree
2008-12-24
cjfields
Rem
o
ve Bio
:
:
Microarray from branch (still in de
v
e
lopm
e
nt
.
.
.
commit
|
commitdiff
|
tree
2008-12-24
c
j
fiel
d
s
Remove (merge didn
'
t remove t
h
is for
some reason)
commit
|
commitdiff
|
tree
2008-12-24
cj
f
ield
s
Remove
(
merge d
i
dn'
t
rem
o
ve this f
o
r some reas
o
n)
commit
|
commitdiff
|
tree
2008-12-22
c
j
fi
e
lds
sync tr
u
nk wi
t
h branch
commit
|
commitdiff
|
tree
2008-12-20
c
jfields
5
.
6
.
1
i
s min per
l
versio
n
required for all
co
r
e modules now
commit
|
commitdiff
|
tree
2008-12-19
cjfie
l
ds
update NAMES
commit
|
commitdiff
|
tree
2008-12-19
cj
f
ie
l
ds
s
mall typo
commit
|
commitdiff
|
tree
2008-12-18
cjf
i
elds
typ
o
commit
|
commitdiff
|
tree
2008-12-18
cjfields
[
b
ug
2714]
commit
|
commitdiff
|
tree
2008-12-17
cjfields
f
ix
t
est
n
umber
commit
|
commitdiff
|
tree
2008-12-17
cjfields
u
pdat
e
Test::Warn (fixes Qual
.
t test
prob
l
ems wit
h
.
.
.
commit
|
commitdiff
|
tree
2008-12-16
cjfields
missed one
commit
|
commitdiff
|
tree
2008-12-16
cjfield
s
EUtilities remote
t
e
sts back online (simple tests only)
commit
|
commitdiff
|
tree
2008-12-16
cjfie
l
d
s
E
U
tilit
i
es remote tes
t
s back online (simple tes
t
s only)
commit
|
commitdiff
|
tree
2008-12-16
cjfields
You must
a
ctually test data if yo
u
want this module
.
.
.
commit
|
commitdiff
|
tree
2008-12-16
cjfields
Don't use print! Changing to $self-
>
debug or commenting out
commit
|
commitdiff
|
tree
2008-12-16
cjfield
s
Bio:
:
Graph deprecated in 1
.
6
commit
|
commitdiff
|
tree
2008-12-16
cjfields
stifle warnings when pas
s
i
ng string
i
ns
t
ead
of in
t
e
ger
commit
|
commitdiff
|
tree
2008-12-16
cj
f
ields
h
a
sh ref, not
a
rr
a
y ref
commit
|
commitdiff
|
tree
2008-12-16
c
jfields
[b
u
g 2637]
commit
|
commitdiff
|
tree
2008-12-16
cjfields
[bug 2637]
commit
|
commitdiff
|
tree
2008-12-16
cjf
i
e
l
ds
[bug 263
7
]
commit
|
commitdiff
|
tree
2008-12-16
cjfield
s
[bug 2637]
commit
|
commitdiff
|
tree
2008-12-15
cjfields
[
bug 263
7
]
commit
|
commitdiff
|
tree
2008-12-15
cjfi
e
lds
[bug 2712
]
commit
|
commitdiff
|
tree
2008-12-15
cjfiel
d
s
scores
commit
|
commitdiff
|
tree
2008-12-15
cjfield
s
remaining te
s
ts for Bio
:
:Tool
:
:EUtilities
commit
|
commitdiff
|
tree
2008-12-15
cjfield
s
more test data
commit
|
commitdiff
|
tree
2008-12-15
cjfields
Updates:
commit
|
commitdiff
|
tree
2008-12-13
cjfields
initial batch of EUtilParameters
t
ests
commit
|
commitdiff
|
tree
2008-12-13
cjfields
einf
o
test
s
commit
|
commitdiff
|
tree
2008-12-12
cjfields
som
e
EUtil
i
t
i
es tests (pa
r
s
ing from file
s
)
commit
|
commitdiff
|
tree
2008-12-12
c
j
field
s
some te
s
t data for
B
io::To
o
l
s
:
:EUtilities
commit
|
commitdiff
|
tree
2008-12-12
cjfields
updates to EUtili
t
ies
(
getting r
e
ady for doc
s
, tests
.
.
.
commit
|
commitdiff
|
tree
2008-12-12
cjfie
l
d
s
Move EUti
l
Parameters to To
o
ls (seems more app
r
opriate)
commit
|
commitdiff
|
tree
2008-12-11
c
j
fi
e
lds
fix f
o
r bug wh
e
n getting
c
ache
d
resp
o
n
s
e with filename
.
.
.
commit
|
commitdiff
|
tree
2008-12-11
cjfiel
d
s
sma
l
l pointer to wiki
page
(
w
ill update along with
.
.
.
commit
|
commitdiff
|
tree
2008-12-11
cjfie
l
ds
sm
a
l
l
u
p
date
commit
|
commitdiff
|
tree
2008-12-11
cjfields
updates
commit
|
commitdiff
|
tree
2008-12-11
cjfields
r
eturn, not '
r
eturn undef'
commit
|
commitdiff
|
tree
2008-12-11
cjfields
r
eturn, not
'return u
n
def'
commit
|
commitdiff
|
tree
2008-12-11
cjfield
s
[b
u
g 26
9
9]
commit
|
commitdiff
|
tree
2008-12-11
cjfie
l
ds
[bug 2
6
9
9]
commit
|
commitdiff
|
tree
2008-12-11
cjfields
[
b
ug 2707]
commit
|
commitdiff
|
tree
2008-12-10
c
jfields
Removing from HE
A
D (deprecated for
1
.
6)
commit
|
commitdiff
|
tree
2008-12-10
cjfields
mini po
d
fix
commit
|
commitdiff
|
tree
2008-12-10
cjfields
update
d
e
p
recati
o
n list
commit
|
commitdiff
|
tree
2008-12-10
c
j
fields
remove Bio
:
:Gra
p
hic
s
(separ
a
te package now)
commit
|
commitdiff
|
tree
next