Merge pull request #113 from tesselode/fix-multi-targets
[wdl/wdl-ol.git] / WDL / diffcalc.h
blobbb6956110817d86b9eb6c00e800e461f7cc484e4
1 #ifndef _WDL_DIFFCALC_H_
2 #define _WDL_DIFFCALC_H_
4 #include "assocarray.h"
8 // Based on "An O(ND) Difference Algorithm and Its Variations", Myers
9 // http://xmailserver.org/diff2.pdf
12 template <class T> class WDL_DiffCalc
14 public:
15 WDL_DiffCalc() {}
16 virtual ~WDL_DiffCalc() {}
18 // cmp() returns 0 if the elements are equal.
19 // returns the length of the merged list and populates m_rx, m_ry.
20 int Diff(const T* x, const T* y, int nx, int ny, int (*cmp)(const T*, const T*))
22 m_rx.Resize(0, false);
23 m_ry.Resize(0, false);
24 ClearV();
26 if (!nx && !ny) return 0;
27 if (!nx || !ny)
29 int i, n=max(nx, ny);
30 for (i=0; i < n; ++i)
32 m_rx.Add(nx ? i : -1);
33 m_ry.Add(ny ? i : -1);
35 return n;
38 if (!cmp(x, y)) // special case
40 int i, n;
41 for (n=1; n < min(nx, ny); ++n)
43 if (cmp(x+n, y+n)) break;
45 int len=Diff(x+n, y+n, nx-n, ny-n, cmp);
46 int *rx=m_rx.Get(), *ry=m_ry.Get();
47 for (i=0; i < len; ++i)
49 if (rx[i] >= 0) rx[i] += n;
50 if (ry[i] >= 0) ry[i] += n;
52 len += n;
53 while (n--)
55 m_rx.Insert(n, 0);
56 m_ry.Insert(n, 0);
58 return len;
61 SetV(0, 1, 0);
62 int d, k, xi, yi;
63 for (d=0; d <= nx+ny; ++d)
65 for (k=-d; k <= d ; k += 2)
67 if (k == -d || (k != d && GetV(d, k-1) < GetV(d, k+1)))
69 xi=GetV(d, k+1);
71 else
73 xi=GetV(d, k-1)+1;
75 yi=xi-k;
76 while (xi < nx && yi < ny && !cmp(x+xi, y+yi))
78 ++xi;
79 ++yi;
81 SetV(d+1, k, xi);
82 if (xi >= nx && yi >= ny) break;
84 if (xi >= nx && yi >= ny) break;
87 int len=(nx+ny+d)/2;
88 int *rx=m_rx.Resize(len);
89 int *ry=m_ry.Resize(len);
90 int pos=len;
92 while (d)
94 while (xi > 0 && yi > 0 && !cmp(x+xi-1, y+yi-1))
96 --pos;
97 rx[pos]=--xi;
98 ry[pos]=--yi;
100 --pos;
101 if (k == -d || (k != d && GetV(d, k-1) < GetV(d, k+1)))
103 ++k;
104 rx[pos]=-1;
105 ry[pos]=--yi;
107 else
109 --k;
110 rx[pos]=--xi;
111 ry[pos]=-1;
113 --d;
116 return len;
119 // m_rx, m_ry hold the index of each merged list element in x and y,
120 // or -1 if the merged list element is not an element in that source list.
121 // example: X="ABCABBA", Y="CBABAC"
122 // 0123456 012345
123 // WDL_Merge() returns "ABCBABBAC"
124 // 012 3456
125 // 0123 45
126 // m_rx={ 0, 1, 2, -1, 3, 4, 5, 6, -1}
127 // m_ry={-1, -1, 0, 1, 2, 3, -1, 4, 5}
128 WDL_TypedBuf<int> m_rx, m_ry;
130 private:
132 WDL_IntKeyedArray<int> m_v; // x coord of d-contour on row k
133 void ClearV()
135 m_v.DeleteAll();
137 void SetV(int d, int k, int xi)
139 m_v.Insert(_key(d, k), xi);
141 int GetV(int d, int k)
143 return m_v.Get(_key(d, k));
145 static int _key(int d, int k) { return (d<<16)|(k+(1<<15)); }
149 // this is a separate function from WDL_DiffCalc only because it requires T::operator=
150 template <class T> int WDL_Merge(const T* x, const T* y, int nx, int ny,
151 int (*cmp)(const T*, const T*), T* list)
153 WDL_DiffCalc<T> dc;
154 int i, n=dc.Diff(x, y, nx, ny, cmp);
155 int *rx=dc.m_rx.Get(), *ry=dc.m_ry.Get();
156 for (i=0; i < n; ++i)
158 if (list) list[i]=(rx[i] >= 0 ? x[rx[i]] : y[ry[i]]);
160 return n;
163 #endif