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Removed DisplayCanvas.setDrawingColor(int,int,boolean) since it exclusively
2012-09-01
Stephan Saalfeld
Removed DisplayC
a
nvas
.
se
t
Drawi
n
gColo
r
(int,int,b
o
olean
.
.
.
commit
|
commitdiff
|
tree
2012-08-31
St
e
phan Saalf
e
ld
Merge branch 'mast
e
r' of ssh://
r
epo
.
o
r
.
cz/srv/git/tr
a
kem2
commit
|
commitdiff
|
tree
2012-08-31
Steph
a
n Saalfeld
a
d
ded exp
e
r
i
m
e
ntal
l
oc
a
l
contrast
e
nhancer R
o
b
ustNormalizeLo
.
.
.
commit
|
commitdiff
|
tree
2012-06-29
Stepha
n
Saalfeld
r
e
moved o
b
solete choice fr
o
m align
l
ayers dialog
commit
|
commitdiff
|
tree
2012-06-26
Stephan Saalfeld
split elastic mon
t
age dia
l
o
g for b
l
o
c
k ma
t
ching a
n
d
u
s
e
commit
|
commitdiff
|
tree
2012-06-26
Step
h
an Sa
a
lfeld
Merge branch 'ma
s
ter'
o
f
ssh:
/
/
r
e
p
o
.
or
.
c
z/
s
rv/git/trakem
2
commit
|
commitdiff
|
tree
2012-06-26
Stephan
S
aalfeld
u
se
and do
n
ot
ignore a
l
pha in help
e
r method
commit
|
commitdiff
|
tree
2012-06-21
Stephan
S
aalfeld
us
e
th
e
new sequential dialogs in
"
montage"
for a selection
.
.
.
commit
|
commitdiff
|
tree
2012-06-20
Stephan Saalfe
l
d
Merg
e
branch 'master' of ssh://repo
.
o
r
.
cz/srv
/
git/trakem2
commit
|
commitdiff
|
tree
2012-06-20
Steph
a
n Saa
l
feld
fixe
d
ran
g
e c
h
e
ck in
l
ayer
ali
g
nment
commit
|
commitdiff
|
tree
2012-06-14
Step
h
an S
a
alfeld
f
ixed condition check in Align Layers f
o
r regularization
.
.
.
commit
|
commitdiff
|
tree
2012-06-14
Ste
p
han Saalfeld
Merge b
r
anch 'm
a
st
e
r' into re
g
ul
a
rized-affine
commit
|
commitdiff
|
tree
2012-06-08
Stephan S
a
alfeld
do not
consider
d
i
sconnec
t
ed tiles
commit
|
commitdiff
|
tree
2012-06-08
Stephan S
a
a
lfel
d
Merge branch 'regula
r
ized-affine' of ssh://repo
.
or
.
.
.
commit
|
commitdiff
|
tree
2012-06-08
Ste
p
han
Saalfeld
pre-align graphs and match
on
l
y overlapping
t
iles
commit
|
commitdiff
|
tree
2012-06-08
S
tephan Saalfeld
pre-align graphs and match
o
n
l
y overlapp
i
ng ti
l
es
commit
|
commitdiff
|
tree
2012-06-08
Stephan Saalfeld
ini
t
ialize
T
ile m
o
dels and
n
ot only p
a
t
c
hes in alignGr
a
p
hs
commit
|
commitdiff
|
tree
2012-06-08
Stephan Saalfeld
change
d
alignGraphs input
c
ollections from Set
t
o Iterable
commit
|
commitdiff
|
tree
2012-06-08
St
e
ph
a
n S
a
alfeld
make su
r
e that static parameters do
n
o
t
override
e
ach
.
.
.
commit
|
commitdiff
|
tree
2012-06-05
Stephan Saalfeld
remove spurious import
commit
|
commitdiff
|
tree
2012-06-05
Stephan Saalfeld
workarou
n
d Oracl
e
javac generics
i
ssue
commit
|
commitdiff
|
tree
2012-06-05
St
e
phan Saalfeld
multi-layer
-
mosaic uses Param/
P
aramOptimize
.
setu
p
(St
r
ing
.
.
.
commit
|
commitdiff
|
tree
2012-06-05
Stephan Saalfeld
mo
n
tage layers
u
s
e
s Pa
r
amOptimize
.
setup
instead of
.
.
.
commit
|
commitdiff
|
tree
2012-06-05
Stephan Saalfeld
do
n
ot fix
a
r
andom ti
l
e if non
e
is fix
e
d
commit
|
commitdiff
|
tree
2012-05-29
Steph
a
n
S
aalfeld
Condensed
.
mail
m
ap
commit
|
commitdiff
|
tree
2012-05-29
Ste
p
han S
a
alfeld
Added
.
mailmap
commit
|
commitdiff
|
tree
2012-05-21
S
t
ephan Saalfeld
Me
r
ge bran
c
h '
m
aster' into regularized-affin
e
commit
|
commitdiff
|
tree
2012-05-21
Stephan Saalfeld
added *None* fi
e
ld to layer range referen
c
e selecti
o
n
commit
|
commitdiff
|
tree
2012-05-21
Steph
a
n Saalfe
l
d
s
plit Align
.
P
a
ramOptimi
z
e dialogs in
p
i
eces
that fit
.
.
.
commit
|
commitdiff
|
tree
2012-05-21
Stephan Saalfeld
added Gen
e
ricAffineTile2D
commit
|
commitdiff
|
tree
2012-05-21
Step
h
an Sa
a
lfeld
gen
e
r
a
l
ized Abst
r
actAffineT
i
l
e2
D
gener
i
c param
e
t
e
r
commit
|
commitdiff
|
tree
2012-05-15
S
tephan Saalf
e
ld
trac
k
r
e
fa
c
toring in mpi
c
bg
.
commit
|
commitdiff
|
tree
2012-05-09
S
tephan Saalfeld
added regularized affine layer align
m
e
nt,
commit
|
commitdiff
|
tree
2012-03-28
Stephan Saal
f
e
l
d
f
i
xed createImage()
:
u
se premultiplie
d
ras
t
e
r
commit
|
commitdiff
|
tree
2012-03-27
Stephan S
a
alfel
d
d
o no
t
print the m
i
pmap scale
commit
|
commitdiff
|
tree
2012-03-27
Stephan Saalfeld
for now, do
n
ot
u
se p
r
e-multip
l
ied
a
lph
a
since it does
.
.
.
commit
|
commitdiff
|
tree
2012-03-27
Steph
a
n Saalfel
d
Fixed wrong painting of Patches whe
n
using a downsampler
.
.
.
commit
|
commitdiff
|
tree
2012-03-27
Stephan Saalfeld
D
ownsamplerMipMaps now
c
onsistently us
e
s combined downsampli
.
.
.
commit
|
commitdiff
|
tree
2012-03-27
Stephan S
a
a
lfeld
fixed Do
w
nsamplerMip
M
aps blending merge
d
alph
a
in
t
o
.
.
.
commit
|
commitdiff
|
tree
2012-03-27
Stepha
n
S
aalfeld
Downs
a
mpler
test still shows
it being signifi
c
antly
.
.
.
commit
|
commitdiff
|
tree
2012-03-27
Steph
a
n Saalfe
l
d
Fixed Dow
n
sampler: range check
i
n b
y
te c
o
nversion was
.
.
.
commit
|
commitdiff
|
tree
2012-03-27
Ste
p
ha
n
Saal
f
eld
Merge
b
ranch 'integral' of ssh://repo
.
or
.
cz/srv/git
.
.
.
commit
|
commitdiff
|
tree
2012-03-08
Stephan Sa
a
lfel
d
added missing pa
c
kage
t
o Fakefile
commit
|
commitdiff
|
tree
2012-03-08
S
t
eph
a
n Saalfeld
M
e
rge
bran
c
h 'maste
r
'
of ssh://rep
o
.
or
.
cz/srv/g
i
t/t
r
a
k
em2
commit
|
commitdiff
|
tree
2012-03-08
Stephan
S
aalfel
d
f
i
x lo
c
al
s
c
a
le e
s
timat
e
commit
|
commitdiff
|
tree
2012-03-07
Stephan Saalfeld
a
d
ded
getLocalScal
e
(x,y) me
t
hod
to Patch
commit
|
commitdiff
|
tree
2012-03-07
Step
h
an Sa
a
l
feld
patch does not
p
ropagate N
o
nI
n
vertibleMo
d
elExcept
i
on
.
.
.
commit
|
commitdiff
|
tree
2012-03-07
St
e
p
h
an Saal
f
eld
M
erge branch
'
master'
of
s
sh://r
e
p
o
.
or
.
c
z/srv/git/
t
rakem2
commit
|
commitdiff
|
tree
2012-03-07
Stephan Saalfeld
a
d
d
ed method
s
to fetch the
c
l
o
sest t
r
iangle of a transform
.
.
.
commit
|
commitdiff
|
tree
2012-02-27
Steph
a
n Sa
a
lf
e
ld
in the midd
l
e of
.
.
.
amend with f
i
nal co
m
mit
commit
|
commitdiff
|
tree
2012-02-27
S
tephan
Saalfeld
demonstrat
e
byte co
n
versio
n
in
an extra
l
o
op to be
.
.
.
commit
|
commitdiff
|
tree
2012-02-25
S
t
e
p
han Saalfeld
Merge b
r
anch 'integral' of s
s
h
:
//repo
.
or
.
c
z
/srv/git
.
.
.
commit
|
commitdiff
|
tree
2012-02-25
S
te
p
han Saalfeld
Downsampler fin
i
shed
.
I have tested sev
e
ra
l
v
a
riant
s
.
.
.
commit
|
commitdiff
|
tree
2012-02-24
Stephan
S
aalf
e
ld
e
x
perimantal com
m
it:
commit
|
commitdiff
|
tree
2012-02-23
Stephan Saa
l
feld
Merge branch 'integral' o
f
s
sh://r
e
po
.
or
.
cz/sr
v
/
git
.
.
.
commit
|
commitdiff
|
tree
2012-02-23
Stephan
Saalfeld
Downsampler
w
ith alpha-channels r
e
ndering into by
t
e
.
.
.
commit
|
commitdiff
|
tree
2012-02-22
Stephan Saalfe
l
d
M
e
rge branch 'master' of ssh://repo
.
or
.
cz/srv/
g
it/trake
m
2
commit
|
commitdiff
|
tree
2012-02-22
Stephan Saalfeld
s
e
t
interpolation
m
ode to actually
i
nterpolat
e
masks
commit
|
commitdiff
|
tree
2012-01-06
S
t
epha
n
Sa
a
l
f
eld
Fixed bug 392
,
the property n_mipmaps_threads must
.
.
.
commit
|
commitdiff
|
tree
2011-11-07
St
e
phan S
a
alfeld
ElasticMo
n
tage: do not visu
a
lize
commit
|
commitdiff
|
tree
2011-11-07
S
tephan Saalfeld
Merge branc
h
'master'
o
f
ssh
:
//
r
epo
.
or
.
c
z/srv/gi
t
/tra
k
e
m
2
commit
|
commitdiff
|
tree
2011-11-07
Stephan S
a
alfeld
Alig
n
Task: really skip layers
a
nnotat
i
on-with linked
.
.
.
commit
|
commitdiff
|
tree
2011-11-07
Stephan Saalfeld
E
l
as
t
icMontage: respect fixed Patches (from selection
.
.
.
commit
|
commitdiff
|
tree
2011-11-07
Stephan Saalfeld
renamed
s
had
i
ng local parameter
commit
|
commitdiff
|
tree
2011-11-07
S
tephan Sa
a
lfeld
Atte
m
p
t to fix bug 380
.
Pleas
e
c
h
e
ck if the behavior
commit
|
commitdiff
|
tree
2011-11-07
S
t
ephan Saalfeld
added comment
s
and fixed typo
commit
|
commitdiff
|
tree
2011-10-22
St
e
p
han
S
a
alfeld
ElasticAl
i
gnment
/
M
o
ntage:
commit
|
commitdiff
|
tree
2011-10-19
Stephan Sa
a
lfeld
M
e
rge branch 'maste
r
' of ssh://repo
.
or
.
cz/srv/
g
i
t/trakem2
commit
|
commitdiff
|
tree
2011-10-12
Stephan Saa
l
fe
l
d
Merge branch 'master' of ssh:/
/
re
p
o
.
or
.
cz/
s
rv/g
i
t/trakem2
commit
|
commitdiff
|
tree
2011-10-10
Stephan
Saa
l
f
eld
Merge branch 'ma
s
t
e
r' of ss
h
://repo
.
or
.
cz/sr
v
/git/trak
e
m2
commit
|
commitdiff
|
tree
2011-10-10
Ste
p
han Sa
a
lf
e
ld
Align us
e
s Util
s
.
l
o
g inst
e
ad of IJ
.
log
commit
|
commitdiff
|
tree
2011-10-10
Stephan Saalfeld
Distortion correction u
s
es
U
tils
.
log inste
a
d of IJ
.
log
commit
|
commitdiff
|
tree
2011-10-10
Stephan Saalfeld
log time and date
p
ear
e
ach
log print
commit
|
commitdiff
|
tree
2011-10-10
Stephan Saalfeld
added exper
i
mental 16bit unsi
g
n
e
d t
i
les e
x
port
e
r
commit
|
commitdiff
|
tree
2011-10-10
S
tephan Saalfeld
Tr
a
n
sformMeshMappingWithMasks g
o
t methods
a
nd
re
n
dering
commit
|
commitdiff
|
tree
2011-10-01
S
t
e
p
han
Saalfeld
make IJ
.
l
o
g
to Utils
.
log in
Elast
i
cL
a
yerAlig
n
m
e
n
t
commit
|
commitdiff
|
tree
2011-09-29
Stephan Saalfeld
ad
d
ed block radius as p
a
rameter to
commit
|
commitdiff
|
tree
2011-09-28
Stephan
S
a
alfeld
E
lastic
L
a
y
erAlignm
e
nt visualization
b
ack to false
commit
|
commitdiff
|
tree
2011-09-27
Stephan
Saalfeld
springmesh damp
back to normal, not much
commit
|
commitdiff
|
tree
2011-09-27
Stephan Saalfeld
Merge branch 'master' of ssh:
/
/repo
.
or
.
cz/srv/git/trakem2
commit
|
commitdiff
|
tree
2011-09-27
S
t
e
p
han Saalfe
l
d
a
d
d
e
d local
s
m
o
othness fi
l
ter to
e
l
a
s
tic layer
commit
|
commitdiff
|
tree
2011-09-27
Ste
p
han Saa
l
fe
l
d
ad
d
ed
a
me
t
hod to create a
n
AbstractModel us
i
ng an
commit
|
commitdiff
|
tree
2011-09-25
Ste
p
han Saalfeld
f
ixed wrong namings from last commit
commit
|
commitdiff
|
tree
2011-09-24
S
tep
h
an Saalfeld
added transfer
mode
s
f
o
r CoordinateTransforms,
commit
|
commitdiff
|
tree
2011-09-24
St
e
phan
S
aalf
e
ld
adde
d
a method t
o
pre-a
p
p
end a
C
oordina
t
e
T
ransform
commit
|
commitdiff
|
tree
2011-09-15
Stephan
Saalfe
l
d
re
m
ove
c
lutter
commit
|
commitdiff
|
tree
2011-09-15
Stepha
n
S
a
alfe
l
d
Merge bra
n
c
h 'mas
t
er' into ela
s
tic-al
i
g
n
commit
|
commitdiff
|
tree
2011-09-15
S
t
ephan
Saalf
e
ld
small declutter NonLinear
T
ransf
o
rm
M
ode
commit
|
commitdiff
|
tree
2011-09-14
Stephan Sa
a
lfeld
Me
r
ge branch 'elastic-align' of ssh://repo
.
or
.
c
z
/srv
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
S
t
ephan Saalfeld
Transf
o
rmM
e
shMappi
n
g
WithMask
s
m
ulti-th
r
eade
d
commit
|
commitdiff
|
tree
2011-09-14
St
e
phan Saa
l
f
e
ld
m
a
ke mesh reso
l
ution a Patch p
a
rameter i
n
s
t
e
ad
of
32
commit
|
commitdiff
|
tree
2011-09-12
Stephan Saalfeld
Merge b
r
anch 'master' into elastic-
a
lign
commit
|
commitdiff
|
tree
2011-09-12
Stephan Saa
l
f
e
l
d
Merge branch 'elastic-align
'
o
f ssh://
r
e
po
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2011-09-12
Stephan Saalfeld
separate SIFT parameter dialog
commit
|
commitdiff
|
tree
2011-09-06
Ste
p
han
S
a
alfeld
fixed Elasti
c
Montage using the w
r
ong line
a
r mode
l
.
.
.
commit
|
commitdiff
|
tree
2011-09-01
Steph
a
n Saalfeld
fixed Downsampler doing one pixe
l
less than it should
commit
|
commitdiff
|
tree
2011-08-30
Stephan Saalfeld
ElasticMontage: s
w
itch off visua
l
izati
o
n
again
commit
|
commitdiff
|
tree
2011-08-30
S
t
ep
h
an S
a
alfeld
f
i
x Gaus
s
i
a
n
m
ipmap g
e
nerat
i
on in FS
L
oader:
commit
|
commitdiff
|
tree
2011-08-30
Stephan Saalfeld
F
l
oa
t
Processsor
T
2 got a method fo
r
downsampling by
.
.
.
commit
|
commitdiff
|
tree
2011-08-29
Step
h
an Saalfeld
u
pdated serial uid
commit
|
commitdiff
|
tree
next