descriptionQPMS photonic multiple scattering suite
homepage URLhttps://qpms.necada.org
ownermarek@necada.org
last changeTue, 26 Dec 2023 10:35:05 +0000 (26 12:35 +0200)
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README.md

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QPMS README

QPMS (standing for QPMS Photonic Multiple Scattering) is a toolkit for frequency-domain simulations of photonic systems consisting of compact objects (particles) inside a homogeneous medium. Scattering properties of the individual particles are described by their T-matrices (which can be obtained using one of the built-in generators or e.g. with the scuff-tmatrix tool from the SCUFF-EM suite).

QPMS handles the multiple scattering of electromagnetic radiation between the particles. The system can consist either of a finite number of particles or an infinite number of periodically arranged lattices (with finite number of particles in a single unit cell).

Features

Finite systems

Infinite systems (lattices)

Getting the code

The codebase is available at the main upstream public repository <https://repo.or.cz/qpms.git> or any of the maintained mirrors. Just clone the repository with git and proceed to the installation instructions below.

Installation

The package depends on several python modules, a BLAS/LAPACK library with the respective C bindings (incl. the lapacke.h and cblas.h headers; OpenBLAS does have it all and is recommended) and GSL (>= 2.0). The python module dependencies should be installed automatically when running the installation script. If you have a recent enough OS, you can get GSL easily from the repositories; on Debian and derivatives, just run apt-get install libgsl-dev under root. Alternatively, you can get the source and compile it yourself.

You also need a fresh enough version of cmake.

QPMS uses a C version of the Amos library for calculating Bessel function from a submodule. Before proceeding with running cmake, the submodules need to be downloaded first (in the QPMS source root directory):

```{.sh} git submodule init git submodule update

After GSL is installed and submodules updated, you can install qpms to your local python library using

```{.sh}
  cmake -DCMAKE_INSTALL_PREFIX=${YOUR_PREFIX} .
  make install
  python3 setup.py install --user

Above, replace ${YOUR_PREFIX} with the path to where you want to install the shared library; you will also need to make sure that the linker can find it; on Linux, this means the path ${YOUR_PREFIX}/lib is included in your LIBRARY_PATH and LD_LIBRARY_PATH environment variables. The same applies to the GSL and OpenBLAS dependencies: they must be installed where the installation scripts and linker can find them (setting the C_INCLUDE_PATH environment variable might be necessary as well).

Special care might need to be taken when installing QPMS in cluster environments. Specific installation instructions for Aalto University's Triton cluster can be found in a separate document.

Instructions for installation on Android-based devices are in another document.

Documentation

QPMS documentation is a work in progress. Most of the newer code is documented using doxygen comments. Documentation generated for the upstream version is hosted on the QPMS homepage <https://qpms.necada.org>.

To build the documentation yourself, just run doxygen in the QPMS source root directory; the documentation will then be found in docs/html/index.html.

Of course, the prerequisite of this is having doxygen installed. If you don't, you will probably find it easily in your OS's repositories. On Debian and derivatives, simply run apt-get install doxygen under root.

Tutorials

See also the examples directory in the source repository.

Command line utilities

Acknowledgments

This software has been developed in the Quantum Dynamics research group, Aalto University, Finland. If you use the code in your work, please cite M. Nečada and P. Törmä, Multiple-scattering T-matrix simulations for nanophotonics: symmetries and periodic lattices, arXiv: 2006.12968 (2020) in your publications, presentations, and similar.

Please also have a look at other publications by the group (google scholar Päivi Törmä), they may be useful for your work as well.

Bug reports

If you believe that some parts of QPMS behave incorrectly, please mail a bug report to marek@necada.org. To ensure that your message is not considered spam, please start the subject line with QPMS.

If you were able to fix a bug yourself, please include the patch as well, see below.

Contributions

Contributions to QPMS are welcome, be it bug fixes, improvements to the documentation, code quality, or new features.

You can send patches prepared using the git format-patch tool to marek@necada.org.

If you plan to contribute with major changes to the codebase, it is recommended to discuss that first (see the contact information below).

Contact & discussion

You can contact the main author e.g. via e-mail or Telegram.

You are also warmly welcome to the QPMS user chat in Telegram!

shortlog
2023-12-26 Marek NečadaFix missing import in finiterectlat-scatter.pymaster
2022-06-23 Marek NečadaFix qpms_vswf_set_reindex().
2022-06-22 Marek NečadaFix saving lists of arrays with recent versions of...
2022-06-21 Marek NečadaDisable "hard" examples in CI
2022-06-21 Marek NečadaAdd bc to CI common prerequisities (required to run...
2022-06-21 Marek NečadaRun some working examples in CI
2022-06-21 Marek Nečadasympy fix deprecated cyclic printing init
2022-06-21 Marek NečadaInitial qpms version metadata in library and output...
2022-06-21 Marek NečadaVersion metadata into output files
2022-06-21 Marek NečadaFix __version__, pdf annotate function
2022-06-21 Marek NečadaInitial version info in the C library
2022-06-16 Marek NečadaTrustworthier source for zbessel submodule
2022-06-15 Marek NečadaInitial CI workflow for Drone
2022-06-10 Marek NečadaList of public mirrors
2022-06-07 Marek NečadaInstallation on Android.
2022-06-07 Marek NečadaDon't import qpms_p in __init__, remove scipy from...
...
heads
10 months ago cython3
10 months ago master
2 years ago argproc_constant_tmatrix
2 years ago ewald_dbg
2 years ago archive/ci_202206
2 years ago ewald_dbg_rebased2
2 years ago catch_test
3 years ago dimer_wip
4 years ago article
4 years ago zbessel
4 years ago finite_lattice_speedup
4 years ago precise_polynomials
5 years ago latticegen3d