tests/restartIterator_megatest.py

   1 import unittest
   2 from testlib import testutil, PygrTestProgram
   3 from pygr import worldbase
   4
   5 class RestartIterator_Test(unittest.TestCase):
   6     def setUp(self):
   7         self.msa = worldbase("Bio.MSA.UCSC.dm3_multiz15way")
   8         genome = worldbase("Bio.Seq.Genome.DROME.dm3")
   9         self.seq = -genome['chr3L'][10959977:10959996]
  10
  11     def tearDown(self):
  12         # Restore original worldbase path to remedy lack of isolation
  13         # between tests from the same run
  14         worldbase.update(None)
  15
  16     def test_restartIterator(self):
  17         try:
  18             self.msa[self.seq]
  19         except KeyError:
  20             # Shouldn't happen here but a valid response
  21             pass
  22
  23
  24 if __name__ == '__main__':
  25     PygrTestProgram(verbosity=2)
  26