5 * --jobs evaluates expression: +3*log(55)% = ncpu*1.12
7 * Bug fixes and man page updates.
14 * Better support for wide characters in --latest-line.
16 * Support for rsync 3.2.7.
18 * Bug fixes and man page updates.
25 * parsort: --parallel now does closer to what you expect.
27 * parallel: --files0 is --files but \0 separated.
29 * Bug fixes and man page updates.
31 News about GNU Parallel:
33 * 5 great Perl scripts to keep in your sysadmin toolbox
34 https://www.redhat.com/sysadmin/perl-scripts
41 * Bug fixes and man page updates.
43 News about GNU Parallel:
45 * The Best Ethical Hacking Tools of 2023 (and their basic usage)
46 https://www.purevpn.com/blog/the-best-hacking-tools-of-2023/#11_GNU_Parallel
48 * GNU Parallel: criando atividades em paralelo com shell script
49 https://www.vivaolinux.com.br/artigo/GNU-Parallel-criando-atividades-em-paralelo-com-shell-script/
56 * --results works on more file systems (e.g. fat)
58 * Joblog gives the same exit code as bash.
60 News about GNU Parallel:
62 * Programação Shell Linux: Paralelismo de processos com GNU parallel
63 https://www.youtube.com/watch?v=duheTWLIrp8
65 * Talk Python: Data Science from the Command Line
66 https://talkpython.fm/episodes/show/392/data-science-from-the-command-line
73 * Support for IPv6 adresses and _ in hostnames in --sshlogin.
75 * Use --total-jobs for --eta/--bar if generating jobs is slow.
77 * A lot of bugs fixed in --latest-line.
79 * Better support for MSYS2.
81 * Better Text::CSV error messages.
83 * --bar supports UTF8.
85 * Bug fixes and man page updates.
87 News about GNU Parallel:
89 * GNU Parallel is now on Mastodon: @GNU_Parallel@hostux.social
96 * --latest-line chops line length at terminal width.
98 * Determine max command length faster on Microsoft Windows.
100 News about GNU Parallel:
102 * Distributed Task Processing with GNU Parallel
103 https://www.youtube.com/watch?v=usbMLggdMgc
105 * GNU Parallel workflow for many small, independent runs
106 https://docs.csc.fi/support/tutorials/many/
108 * Copy a File To Multiple Directories With A Single Command on Linux
109 https://www.linuxfordevices.com/tutorials/linux/copy-file-to-multiple-directories-with-one-command
111 * Behind The Scenes: The Power Of Simple Command Line Tools At Cloud
113 https://blog.gdeltproject.org/behind-the-scenes-the-power-of-simple-command-line-tools-at-cloud-scale/
115 * Run lz4 compression in parallel using GNU parallel
116 https://www.openguru.com/2022/09/
118 * Xargs / Parallel With Code Examples
119 https://www.folkstalk.com/2022/09/xargs-parallel-with-code-examples.html
121 * Parallel processing on a single node with GNU Parallel
122 https://www3.cs.stonybrook.edu/~cse416/Section01/Slides/SeaWulfIntro_CSE416_09222022.pdf
124 * Using GNU parallel painlessly -- from basics to bioinformatics job
125 orchestration https://www.youtube.com/watch?v=qypUdm-IE9c
132 * --colour-failed only changes output for failing jobs.
134 * Password for --sshlogin can be put in $SSHPASS.
136 * Examples are moved from `man parallel` to `man parallel_examples`.
138 * Bug fixes and man page updates.
140 News about GNU Parallel:
142 * WOMM - Works On My Machine uses GNU Parallel https://pypi.org/project/womm/
149 * --header 0 allows using {filename} as replacement string
151 * Bug fixes and man page updates.
158 * --colour-failed will color output red if the job fails.
160 * sql: support for InfluxDB.
162 * Polarhome.com is dead, so these OSs are no longer supported: AIX
163 HPUX IRIX Minix OPENSTEP OpenIndiana OpenServer QNX Solaris Syllable
164 Tru64 Ultrix UnixWare.
166 * Bug fixes and man page updates.
173 * , can be used in --sshlogin if quoted as \, or ,,
175 * --plus {/#regexp/str} replace ^regexp with str.
177 * --plus {/%regexp/str} replace regexp$ with str.
179 * --plus {//regexp/str} replace every regexp with str.
181 * 'make install' installs bash+zsh completion files.
183 * Bug fixes and man page updates.
190 * --latest-line shows only the latest line of running jobs.
192 * --color colors output in different colors per job (this obsoletes --ctag).
194 * xargs compatibility: --process-slot-var foo sets $foo to jobslot-1.
196 * xargs compatibility: --open-tty opens the terminal on stdin (standard input).
198 * Bug fixes and man page updates.
200 News about GNU Parallel:
202 * Building a fault-tolerant work queue for command-line executions
203 with GNU Parallel https://www.jvt.me/posts/2022/04/28/shell-queue/
205 * Make your code do more, with less
206 https://www.blopig.com/blog/2022/05/make-your-code-do-more-with-less/
208 * W09 B IntroHPC II 20220513 gnu parallel
209 https://www.youtube.com/watch?v=2udvC90rIa4
216 * sash is no longer supported as shell.
218 * --retries 0 is an alias for --retries 2147483647.
220 * --shell-completion returns shell completion code.
222 * --ssh-login-file reloads every second.
224 * --parset is replaced with --_parset because it is only used internally.
226 * sem --pipe passes STDIN (standard input) to the command.
228 * Bug fixes and man page updates.
235 * --sshlogin user:password@host is now supported by using sshpass.
237 * Bug fixes and man page updates.
239 News about GNU Parallel:
241 * Bash: GNU Parallel with Curl
242 https://gist.github.com/CMCDragonkai/5914e02df62137e47f32?permalink_comment_id=2617456
244 * The Pipe Operator Explained
245 https://medium.com/geekculture/the-pipe-operator-explained-cbd41e23775a
252 * Encoding of remote commands has changed. This limits the length of
253 remote commands to less than half. It also requires $REMOTE_TMPDIR
254 to be writable. It makes this release beta quality.
256 * Time functions hh_mm_ss() hhmmss() hh_mm() hhmm() are now available
259 * Many options in the man page for parallel now has 'see also' for
262 * parallel_options_map.pdf is a map showing which options other
265 * {uniq} added to --plus to only run jobs with unique values.
267 * sem --fg exits with the exit code of the job.
269 * Bug fixes and man page updates.
276 * GNU Parallel turned 20 on the 2022-01-06
277 https://www.gnu.org/software/parallel/20th-birthday.html
279 * Bug fixes and man page updates.
281 News about GNU Parallel:
283 * Save Time with Modern Search Techniques
284 https://www.eventbrite.com/e/ohio-information-security-forum-january-2022-monthly-meeting-tickets-240632737997
286 * Bash "Fail immediately if any fails"
287 https://morioh.com/p/a01b883dc57c
289 * Re-encoding the EmacsConf videos with FFmpeg and GNU Parallel
290 https://sachachua.com/blog/2021/12/re-encoding-the-emacsconf-videos-with-ffmpeg-and-gnu-parallel/
292 * Bash 平行 https://learntutorials.net/ja/bash/topic/10778/%E5%B9%B3%E8%A1%8C
299 * Bug fixes and man page updates.
301 News about GNU Parallel:
303 * The first version of Parallel will be 20 years on 2022-01-06
305 * HerrComp Intro HPC gnu parallel
306 https://www.youtube.com/watch?v=tcgjKWfgWQY
309 https://qiita.com/toramili/items/44a770cfb9ef1edc9e26
311 * How To Install parallel on Ubuntu 20.04
312 https://installati.one/ubuntu/20.04/parallel/
314 * Distributing embarrassingly parallel tasks GNU Parallel
315 https://ulhpc-tutorials.readthedocs.io/en/latest/sequential/gnu-parallel/
322 * Bug fixes and man page updates.
324 News about GNU Parallel:
326 * Otimizando o seu Hacking com o GNU Parallel - Mateus Buogo
327 https://www.youtube.com/watch?v=xIpPPZXDKGU
329 * SMACK 12 - Do it faster! Simple ways to use all those cores (and
330 GPUs) efficiently. https://www.youtube.com/watch?v=lXDGY7NvOYk
337 * Don't postpone output until $jobslots jobs have been started.
339 * Bug fixes and man page updates.
341 News about GNU Parallel:
343 * How to Install GNU Parallel using Anaconda | Linux
344 https://www.youtube.com/watch?v=UwDNVP-L0qA
346 * Install GNU Parallel from source code | Linux
347 https://www.youtube.com/watch?v=PIyJH4ben5o
349 * Compiling GNU Parallel on CentOS-7
350 https://thelinuxcluster.com/2021/10/19/compiling-gnu-parallel-on-centos-7/
357 * Bug fixes and man page updates.
359 News about GNU Parallel:
361 * 3 Programs that will Level Up your Bash Game
362 https://medium.com/codex/3-programs-that-will-level-up-your-bash-game-bf14e17e2291
364 * I Summarized 100+ Command-Line Tools for Data Scientists in 15
366 https://towardsdatascience.com/i-summarized-100-command-line-tools-for-data-scientists-in-15-minutes-976def544ffe
368 * Speed up Your Builds by Parallelizing
369 https://www.incredibuild.com/blog/speed-up-your-builds-by-parallelizing
371 * Bash: GNU Parallel with Curl
372 https://gist.github.com/dinh/93b936a55de9a331199d6582bc2921d2
379 * --ctag/--ctagstring colors the tag in different colors for each job.
381 * You can use unit prefixes (k, m, g, etc) with -n -N -L.
383 * Bug fixes and man page updates.
385 News about GNU Parallel:
387 * Parallelising jobs with GNU parallel
388 https://blog.ronin.cloud/gnu-parallel/
390 * Use multiple CPU Cores with your Linux commands - awk, sed, bzip2,
391 grep, wc, etc. https://cdmana.com/2021/07/20210728132344693t.html
393 * How to execute commands in parallel in Linux
394 https://net2.com/how-to-execute-commands-in-parallel-in-linux/
401 * --results no longer prints the result to standard output (stdout) as
403 https://lists.gnu.org/archive/html/parallel/2020-12/msg00003.html
405 * parset supports associative arrays in bash, ksh, zsh.
407 * Online HTML is now generated by Sphinx.
409 * Bug fixes and man page updates.
411 News about GNU Parallel:
413 * Cleaning Up Scanned Documents with Open Source Tools
414 https://kaerumy.medium.com/cleaning-up-scanned-documents-with-open-source-tools-9d87e15305b
421 * Bug fixes and man page updates.
423 News about GNU Parallel:
425 * How to use GNU Parallel
426 https://techtipbits.com/linux/how-to-use-gnu-parallel/
428 * How to Speed Up Bash Scripts with Multithreading and GNU Parallel
429 https://adamtheautomator.com/how-to-speed-up-bash-scripts-with-multithreading-and-gnu-parallel/
431 * Use Parallel to split by line
432 https://madflex.de/use-parallel-to-split-by-line/
434 * Optimizing long batch processes or ETL by using buff/cache properly
435 II (parallelizing network operations)
436 http://www.elsotanillo.net/2021/06/optimizing-long-batch-processes-or-etl-by-using-buff-cache-properly-ii-parallelizing-network-operations/
438 * Parallelization 3: GNU Parallel https://www.youtube.com/watch?v=Rl06WD60afA
445 * --plus includes {%%regexp} and {##regexp}.
447 * Bug fixes and man page updates.
449 News about GNU Parallel:
451 * Batch Calculate and Verify MD5 Checksum With GNU Parallel
452 https://omicx.cc/posts/2021-04-28-calculate-and-verify-md5-checksum-with-gnu-parallel/
454 * HerrComp Gnu parallel, c++11 threads 2021 04 28
455 https://www.youtube.com/watch?v=wDd9F9nn0qA
457 * Distributing embarrassingly parallel tasks GNU Parallel
458 https://ulhpc-tutorials.readthedocs.io/en/latest/sequential/gnu-parallel/
460 * Job Parallelization on Niagara
461 https://www.maryamdaryalal.com/post/job-parallelization-on-niagara
463 * Use Parallel to split by line
464 https://madflex.de/use-parallel-to-split-by-line/
466 * m1 multi-core batch convert with gpu parallel + ffmpeg
467 https://www.youtube.com/watch?v=hAuc0YsXv6A
474 * Bug fixes and man page updates.
476 News about GNU Parallel:
478 * Bioinformatics tutorials - linux and shell advanced - parallel
479 https://www.youtube.com/watch?v=5leL8pyl0XA
481 * GNU Parallel for quick gains
482 https://edbennett.github.io/high-performance-python/04-gnu-parallel/index.html
484 * Processing Linux Commands in Parallel
485 https://www.baeldung.com/linux/processing-commands-in-parallel
488 https://docs-research-it.berkeley.edu/services/high-performance-computing/user-guide/running-your-jobs/gnu-parallel/
490 * GNU Parallel 활용 가이드https://genoglobe.com/kribb/gnu_parallel
492 * Parallel Grep and Awk
493 https://www.highonscience.com/blog/2021/03/21/parallel-grep/
495 * Getting things done with shell scripting
496 https://doma.dev/blog/get-things-done-with-bash/
501 * Bug fixes and man page updates.
503 News about GNU Parallel:
505 * The very first version of Parallel dated 2002-01-06 was found in an
516 (".PHONY : job$jobnr\n",
520 unshift @makefile, "all : ",(map { "job$_ " } 1 .. $jobnr),"\n";
522 open (MAKE, "| make -k -f - -j $processes") || die;
523 print MAKE @makefile;
526 * Introduction to GNU Parallel
527 https://www.youtube.com/watch?v=Kj-6JkAqw-8
529 * Using GNU Parallel with GooseSLURM
530 https://readthedocs.org/projects/gooseslurm/downloads/pdf/latest/#chapter.7
533 https://github.com/lijingbu/omics/blob/main/why_gnu_parallel.md
538 * --filter only run jobs where the filter is true. The filter can
539 contain replacement strings and Perl code such as: '{1} < {2}+1'
541 * --template takes a text file as a template with replacement
542 strings. Then it replaces the replacement strings and saves it
543 under a new filename.
545 * --plus implements {0%} {0#} replacement string for zero padded slot
548 * Warn that you probably mean -d '\r\n' if the first 3 values end in
551 * {= perlexpression =} must return the same value, if run twice on the
554 * Man pages available as .rst-format.
556 * Bug fixes and man page updates.
558 News about GNU Parallel:
560 * A short tutorial on Gnu Parallel
561 https://www.polarmicrobes.org/a-short-tutorial-on-gnu-parallel/
563 * 5 reasons why I love coding on Linux
564 https://opensource.com/article/21/2/linux-programming
566 * Simple Tutorial to install & use GNU Parallel
567 https://medium.com/analytics-vidhya/simple-tutorial-to-install-use-gnu-parallel-79251120d618
569 * LiDO3 - first contact
570 https://www.lido.tu-dortmund.de/cms/de/LiDO3/LiDO3_first_contact_handout.pdf
572 * Rill Stage 2-1: Ways of command-line data analysis
573 https://blog.jastix.biz/post/rill-stage-2-1-cli-data-analysis/
575 * Introduction to GNU Parallel
576 https://blog.knoldus.com/introduction-to-gnu-parallel/
578 * GNU Parallel https://www.hahwul.com/cullinan/parallel/
583 * --memsuspend suspends jobs when there is little memory free. This
584 way you can run jobs in parallel that added up potentially will take
585 up more RAM than is available.
587 * $PARALLEL_ARGHOSTGROUPS and the replacement string {agrp} will give
588 the hostgroup given on the argument when using --hostgroup.
590 * Handy time functions for {= =}: yyyy_mm_dd_hh_mm_ss()
591 yyyy_mm_dd_hh_mm() yyyy_mm_dd() yyyymmddhhmmss() yyyymmddhhmm()
592 yyyymmdd() hash($str)
594 * Bug fixes and man page updates.
596 News about GNU Parallel:
598 * Software Engineering For Scientists
599 https://canvas.stanford.edu/courses/133091
601 * Optional Individual Submission 4 Job Handling - GNU Parallel
602 https://www.youtube.com/watch?v=-tX0bFAYAxM
604 * 关于gnu parallel:GnuParallel:在集群上并行化脚本,脚本将文件写入主
605 节点https://www.codenong.com/25172209/
608 https://qiita.com/hana_shin/items/53c3c78525c9c758ae7c
613 * --pipe engine changed making --pipe alpha quality.
615 * --results -.json outputs results as JSON objects on stdout (standard
618 * --delay 123auto will auto-adjust --delay. If jobs fail due to being
619 spawned too quickly, --delay will exponentially increase.
621 * --plus sets {hgrp} that gives the intersection of the hostgroups of
622 the job and the sshlogin that the job is run on.
624 * Bug fixes and man page updates.
626 News about GNU Parallel:
628 * Best practices for accelerating data migrations using AWS Snowball
630 https://aws.amazon.com/blogs/storage/best-practices-for-accelerating-data-migrations-using-aws-snowball-edge/
632 * Pass the Output of a Command as an Argument for Another
633 https://www.baeldung.com/linux/pass-cmd-output-as-an-argument
635 * Warwick RSE Drop-in - Workflow Management Part 2 - GNU Parallel
636 https://www.youtube.com/watch?v=t_v2Otgt87g
641 * Bug fixes and man page updates.
643 News about GNU Parallel:
645 * https://bash-prompt.net/guides/gnu-parallel-multi-server/
650 * --termseq now works for jobs running remotely.
652 * parsort: Performance optimized for 64-core machines.
654 * Bug fixes and man page updates.
656 News about GNU Parallel:
658 * Juan Sierra Pons has made a testimonial:
659 http://www.elsotanillo.net/wp-content/uploads/GnuParallel_JuanSierraPons.mp4
661 * 「翻译」在生物信息学中使用 GNU-Parallel
662 https://cloud.tencent.com/developer/article/1705499
667 * New CPU detection for GNU/Linux.
669 * Bug fixes and man page updates.
671 News about GNU Parallel:
673 * Aug 21, 2020 - More Unix tools
674 https://floki.blog/2020/08/more_unix_tools
681 * Max command line length is changed for MacOS - making this version
682 beta quality for MacOS.
684 * Bug fixes and man page updates.
691 * No new functionality
693 * Bug fixes and man page updates.
695 News about GNU Parallel:
697 * Tips for Running Jobs on your VM
698 https://support.ehelp.edu.au/support/solutions/articles/6000089713-tips-for-running-jobs-on-your-vm#parallel
700 * Introduction to GNU Parallel: Parallelizing Massive Individual Tasks
701 https://www.youtube.com/watch?v=QSFLTEyCKvo
704 http://www.hpc.lsu.edu/training/weekly-materials/2020-Spring/GNUParallel_Spring_2020.pdf
706 * Linux-Fu: Parallel Universe
707 https://hackaday.com/2020/06/29/linux-fu-parallel-universe/
709 * Resumable batch jobs with gnu parallel https://igor.io/parallel/
711 * Introducing Parallel into Shell
712 https://www.petelawson.com/post/parallel-in-shell/
714 * AV1 encoding parallelization with GNU Parallel
715 https://www.reddit.com/r/AV1/comments/fjvqp9/av1_encoding_parallelization_with_gnu_parallel/
717 * Beschleunigte Befehlsbearbeitung mit GNU Parallel
718 https://www.linux-community.de/ausgaben/linuxuser/2013/06/beschleunigte-befehlsbearbeitung-mit-gnu-parallel/
725 * No new functionality
727 * Bug fixes and man page updates.
729 News about GNU Parallel:
731 * GNU Parallel is used at NERSC:
732 https://www.nersc.gov/assets/Uploads/08-Workflows-20200616.pdf
734 * Resumable batch jobs with GNU Parallel https://igor.io/parallel/
736 * Lab Meeting technical talk
737 https://www.slideshare.net/hoffmanlab/gnu-parallel-194030490
739 * Open Sky Software Website Credits
740 https://www.openskysoftware.com/site-credits.htm
742 * Speed up your Python Scripts using Ubuntu and GNU Parallel
743 https://ecce.esri.ca/wpecce/2019/12/24/speed-up-your-python-scripts-using-ubuntu-and-gnu-parallel/
745 * Indispensable command-line tools
746 https://negfeedback.blogspot.com/2020/05/indispensable-command-line-tools.html
748 * GNU Parallel for simulations
749 http://pdebuyl.be/blog/2020/gnu-parallel-for-simulations.html
751 * Introduction to GNU parallel
752 https://bioinformaticsworkbook.org/Appendix/GNUparallel/GNU_parallel_examples.html
759 * While running a job $PARALLEL_JOBSLOT is the jobslot of the job. It
760 is equal to {%} unless the job is being retried. See {%} for
763 * While running a job $PARALLEL_SSHLOGIN is the sshlogin line with
764 number of cores removed. E.g. '4//usr/bin/specialssh user@host'
765 becomes: '/usr/bin/specialssh user@host'
767 * While running a job $PARALLEL_SSHHOST is the host part of an
768 sshlogin line. E.g. '4//usr/bin/specialssh user@host' becomes:
771 * --plus activates the replacement strings {slot} = $PARALLEL_JOBSLOT,
772 {sshlogin} = $PARALLEL_SSHLOGIN, {host} = $PARALLEL_SSHHOST
774 * Bug fixes and man page updates.
776 News about GNU Parallel:
778 * Portable Batch System (PBS) & GNU Parallel - Running a Program
779 Multiple Times in Parallel
780 https://www.youtube.com/watch?v=6ccbWu6Befo
782 * GNU Parallel przykład https://www.youtube.com/watch?v=gs_wG4Kt2G4
784 * Demo of LINUX APP - GNU PARALLEL - running multiple Gstreamer webcam
785 .sh scripts with only 1 command
786 https://www.youtube.com/watch?v=trQuA_wmWjg
791 This release celebrates GNU Parallel's 10 years as a GNU tool:
793 > commit ed2dfb1043768154d4e7678e01e10287155fa834
794 > Author: Ole Tange <ole@tange.dk>
795 > Date: Thu Apr 22 01:23:00 2010 +0200
797 > Name change: Parallel is now GNU Parallel.
798 > Basic structure for sshlogin and sshloginfile.
802 * parsort makes GNU sort run faster for files with more than 1M lines.
804 * Bug fixes and man page updates.
806 News about GNU Parallel:
808 * Several clusters have updated their documentation of GNU Parallel:
809 https://www.grid5000.fr/w/GNU_Parallel
810 https://research-it.berkeley.edu/virtual-training-running-jobs-parallel-savio
811 http://www.hpc.lsu.edu/training/archive/tutorials.php
813 * add_pho uses GNU Parallel: https://github.com/SeedlingsBabylab/add_pho
815 * GNU parallel使用笔记https://zhuanlan.zhihu.com/p/37340011
817 * Virtual Workshop: Running Jobs in Parallel on Savio
818 https://ais.berkeley.edu/events/virtual-workshop-running-jobs-parallel-savio/2020-04-20
820 * Free Concurrency with GNU Parallel
821 https://phili.pe/posts/free-concurrency-with-gnu-parallel/
826 * Bug fixes and man page updates.
828 News about GNU Parallel:
830 * The GNU Parallel course in Copenhagen is cancelled
831 https://www.prosa.dk/nc/arrangementer/arrangement/gnu-parallel-med-ole-tange/
833 * The GNU Parallel course in Århus is cancelled
834 https://www.prosa.dk/nc/arrangementer/arrangement/gnu-parallel-og-parallelisering-i-unix-shellen/
836 * The 10 year anniversary may be cancelled, see
837 https://www.gnu.org/software/parallel/10-years-anniversary.html
839 * Running shell commands in parallel, via GNU Parallel
840 https://dev.to/saveriomiroddi/running-shell-commands-in-parallel-via-gnu-parallel-3a72
842 * Faster nmap scanning with the help of GNU parallel
843 https://badshah.io/experiment/faster-nmap-scanning-with-the-help-of-gnu-parallel/
848 * Bug fixes and man page updates.
853 * --blocktimeout dur - Time out for reading block when using
854 --pipe. If it takes longer than dur to read a full block, use the
855 partial block read so far.
857 * Bug fixes and man page updates.
859 News about GNU Parallel:
861 * GNU Parallel course in Copenhagen
862 https://www.prosa.dk/nc/arrangementer/arrangement/gnu-parallel-med-ole-tange/
864 * GNU Parallel course in Århus
865 https://www.prosa.dk/nc/arrangementer/arrangement/gnu-parallel-og-parallelisering-i-unix-shellen/
867 * GNU Parallel pour accélérer vos process sous Linux
868 https://www.yvonh.com/gnu-parallel-pour-accelerer-vos-process-sous-linux/
870 * How to copy a file to multiple directories in Linux
871 https://net2.com/how-to-copy-a-file-to-multiple-directories-in-linux/
873 * Running linux commands in parallel https://dev.to/voyeg3r/runing-linux-commands-in-parallel-4ff8
878 * GNU Parallel course in Copenhagen
879 https://www.prosa.dk/nc/arrangementer/arrangement/gnu-parallel-med-ole-tange/
881 * GNU Parallel course in Århus
882 https://www.prosa.dk/nc/arrangementer/arrangement/gnu-parallel-og-parallelisering-i-unix-shellen/
884 * GNU Parallel is used in
885 https://github.com/JeffersonLab/rfw_tsf_extractor
887 * Bug fixes and man page updates.
892 * GNU Parallel was presented at Driving IT. Slides:
893 cloud.prosa.dk/s/drivingit
895 * Restarting supervisord processes in parallel
896 https://blog.naderman.de/2019/11/14/restarting-supervisord-processes-in-parallel/
898 * Using GNU Parallel to Create Archives Faster
899 https://www.reddit.com/r/DataHoarder/comments/dsgmhc/parallel_archiving_techniques/
901 * Bug fixes and man page updates.
906 * --tee will use --output-error=warn-nopipe if supported by tee.
908 * GNU Parallel will be presented at Driving IT 2019:
909 https://ida.dk/arrangementer-og-kurser/konferencer/driving-it/tools
911 * UMN Duluth: Job parallelization with task arrays and GNU parallel
912 https://www.msi.umn.edu/tutorials/umn-duluth-job-parallelization-task-arrays-and-gnu-parallel
914 * Genome updater uses GNU Parallel
915 https://github.com/pirovc/genome_updater
917 * Using GNU-Parallel for bioinformatics
918 https://www.danielecook.com/using-gnu-parallel-for-bioinformatics/
920 * Speeding up PostgreSQL ETL pipeline with the help of GODS
921 https://cfengine.com/company/blog-detail/speeding-up-postgresql-etl-pipeline-with-the-help-of-gods/
923 * Runing linux commands in parallel
924 https://dev.to/voyeg3r/runing-linux-commands-in-parallel-4ff8
926 * Research Computing University of Colorado Boulder contains an intro
928 https://readthedocs.org/projects/curc/downloads/pdf/latest/
930 * 如何使用Parallel在Shell中并行执行命令
931 https://www.myfreax.com/gnu-parallel/
933 * 如何测试 Amazon Elastic File System
934 https://aws.amazon.com/cn/blogs/china/how-to-test-drive-amazon-elastic-file-system/
936 * Bug fixes and man page updates.
941 * --nice is now inherited by the nice level that GNU Parallel is
942 started at. So 'nice -n10 parallel' will also cause remote jobs to
943 be run at nice level 10.
945 * --delay is now accurate to within 10 ms
947 * GNU Parallel will be presented at Driving IT 2019:
948 https://ida.dk/arrangementer-og-kurser/konferencer/driving-it/tools
950 * Greenland Ice Sheet solid ice discharge from 1986 through 2017
951 https://www.earth-syst-sci-data.net/11/769/2019/essd-11-769-2019.pdf
953 * App Center Cloud Build Machines > Installed Software > Utilities
954 https://docs.microsoft.com/en-us/appcenter/build/software
956 * Curryfinger - SNI & Host header spoofing utility
957 https://dualuse.io/blog/curryfinger/
960 https://wiki.cac.washington.edu/display/hyakusers/Hyak+parallel-sql
962 * A meditation on analysing data with Perl in parallel using GNU Parallel
963 https://www.reddit.com/r/perl/comments/cyo2qc/a_meditation_on_analysing_data_with_perl_in/
965 * Accélérer ses tâches avec GNU Parallel et les lots de tâches (UL)
966 https://www.eventbrite.ca/e/inscription-accelerer-ses-taches-avec-gnu-parallel-et-les-lots-de-taches-ul-71412840729
968 * RMACC Summit GNU Parallel
969 https://curc.readthedocs.io/en/latest/software/GNUParallel.html
971 * Introducing Parallel into Shell
972 https://petelawson.com/post/parallel-in-shell/
974 * Linux Productivity Tools
975 https://www.usenix.org/conference/lisa19/presentation/maheshwari
977 * Gnu/parallel + Nfs 实现共享文件网络的并发计算等操作
978 http://atomicer.cn/2018/01/18/gnu-parallel-nfs-%E5%AE%9E%E7%8E%B0%E5%85%B1%E4%BA%AB%E6%96%87%E4%BB%B6%E7%BD%91%E7%BB%9C%E7%9A%84%E5%B9%B6%E5%8F%91%E8%AE%A1%E7%AE%97%E7%AD%89%E6%93%8D%E4%BD%9C/#more
980 * Bug fixes and man page updates.
985 * GNU Parallel will be presented at Driving IT 2019:
986 https://ida.dk/arrangementer-og-kurser/konferencer/driving-it#beskrivelse
988 * Linux Productivity Tools
989 https://www.usenix.org/conference/lisa19/presentation/maheshwari
991 * Improve your reconnaissance performance by using GNU Parallel
992 https://mailchi.mp/3f46ceb46357/improve-your-reconnaissance-performance-by-using-gnu-parallel
994 * Paralel İşler / İşlemler / Programlar Bash’de Nasıl Çalıştırılır?
995 https://kaleinfo.com/2019/07/29/paralel-isler-islemler-programlar-bashde-nasil-calistirilir-2/
997 * Use POLYBAR to change WALLPAPER with GNU Parallel
998 https://www.youtube.com/watch?v=rjYg-b_eiRU
1000 * Finding the Balance Between Speed & Accuracy During an Internet-wide
1002 https://captmeelo.com/pentest/2019/07/29/port-scanning.html
1004 * GNU Parallel Ryugu released
1005 https://linuxreviews.org/GNU_Parallel_Ryugu_released
1007 * CO2017 - CW1 - Operating Systems & Networks - Shell scripting
1008 http://www.7daixie.com/2019071646302396.html
1010 * Bug fixes and man page updates.
1015 * {= uq; =} causes the replacement string to be unquoted. Example:
1016 parallel echo '{=uq;=}.jpg' ::: '*'
1018 * --tagstring {=...=} is now evaluated for each line with --linebuffer.
1020 * Use -J ./profile to read a profile in current dir.
1022 * Speedup of startup by 40%: Find the parent shell differently on
1023 GNU/Linux, cache information about the CPU and which setpgrp method
1024 to use to make GNU Parallel start 40% faster.
1026 * $PARALLEL_SSHLOGIN can be used in the command line.
1028 * Occasionally sane: Simple usage of GNU parallel
1029 https://vfoley.xyz/parallel/
1031 * How to run multiple bash scripts in parallel
1032 https://techieroop.com/how-to-run-multiple-bash-scripts-in-parallel/
1034 * Announcing Oracle Solaris 11.4 SRU10
1035 https://blogs.oracle.com/solaris/announcing-oracle-solaris-114-sru10
1037 * Руководство по использованию GNU Parallel https://zalinux.ru/?p=2623
1039 * Bug fixes and man page updates.
1044 * --shard can now take a column name and optionally a perl
1045 expression. Similar to --group-by and replacement strings.
1047 * Using AWK and R to parse 25tb
1048 https://livefreeordichotomize.com/2019/06/04/using_awk_and_r_to_parse_25tb/
1050 * Parallel and Visual testing with Behat
1051 http://parallelandvisualtestingwithbehat.blogspot.com/p/blog-page.html
1053 * 维基百科,自由的百科全书https://zh.wikipedia.org/wiki/GNU_parallel
1055 * Bug fixes and man page updates.
1060 * --group-by groups lines depending on value of a column. The value
1063 * How to compress (bzip / gzip) a very large text quickly?
1064 https://medium.com/@gchandra/how-to-compress-bzip-gzip-a-very-large-text-quickly-27c11f4c6681
1066 * Simple tutorial to install & use GNU Parallel
1067 https://medium.com/@gchandra/simple-tutorial-to-install-use-gnu-parallel-79251120d618
1069 * Introducing Parallel into Shell
1070 https://petelawson.com/post/parallel-in-shell/
1072 * Bug fixes and man page updates.
1077 * Invitation to the 10 years anniversary next year.
1079 * Bug fixes and man page updates.
1084 * SIGTERM is changed to SIGHUP, so sending SIGHUP will make GNU
1085 Parallel start no more jobs, but wait for running jobs to finish.
1087 * SIGTERM SIGTERM is changed to SIGTERM, so sending SIGTERM will make
1088 GNU Parallel kill all running jobs.
1090 * GNU Parallel now includes a cheat sheet: parallel_cheat.pdf
1092 * High Throughput Computing on RMACC Summit and Beyond
1093 https://calendar.colorado.edu/event/high_throughput_computing_on_rmacc_summit_and_beyond#.XH2NBhB7mV4
1095 * GNU Parallel Cheat Sheet by cpriest
1096 https://www.cheatography.com/cpriest/cheat-sheets/gnu-parallel/
1098 * Use Multiple CPU Cores(Parallelize) with Single Threaded Linux
1100 http://xensoft.com/use-multiple-cpu-cores-parallelize-with-single-threaded-linux-commands/
1102 * Bug fixes and man page updates.
1107 * --shard makes it possible to send input to a the same jobslot based
1108 on the value in one column of the input. It is similar to sharding
1111 * --shellquote --shellquote will shell quote the input twice.
1113 * GNU Parallel is available in Termux
1114 https://github.com/termux/termux-packages/tree/master/packages/parallel
1116 * Linux, command line & MetaCentrum
1117 https://trapa.cz/sites/default/files/linux_bash_metacentrum_course_4.pdf
1119 * How to supercharge your bash workflows with GNU parallel
1120 https://medium.freecodecamp.org/how-to-supercharge-your-bash-workflows-with-gnu-parallel-53aab0aea141
1122 * GNU Parallel Spring 2017 https://www.youtube.com/watch?v=LHb29uW_KyI
1124 * Parallelizing Freesurfer blog.cogneurostats.com/?p=148
1126 * FreeSurfer #4: Running recon-all in Parallel https://www.youtube.com/watch?v=XHN2tm3tNaw
1128 * FreeSurfer: recon-all https://www.neurotrivial.com/2019/01/24/freesurfer-recon-all/
1130 * Come ridimensionare 10k foto con la riga di comando
1131 https://pigrecoinfinito.wordpress.com/2018/12/22/come-ridimensionare-10k-foto-con-la-riga-di-comando/
1133 * 并行处理 – Gnu Parallel:嵌套并行
1134 https://codeday.me/bug/20190122/552902.html
1136 * シェルスクリプトでコマンドを並列実行する方法
1137 https://www.kwbtblog.com/entry/2019/01/12/020423
1139 * Bug fixes and man page updates.
1144 * 'env_parallel --end-session' makes it possible to nest 'env_parallel
1147 * Using GNU Parallel in pentesting https://youtu.be/mZ0OUJmkIlA?t=873
1149 * Supercomputer Workshop: Feb 1&7
1150 http://www.ece.unm.edu/featured-students/supercomputer-workshop-feb-17.html
1152 * Bug fixes and man page updates.
1157 * Better /proc/cpuinfo parser.
1159 * Simpler job scheduling flow.
1161 * MPGI Workshop: Job Parallelization with Task Arrays and GNU Parallel
1162 https://www.msi.umn.edu/tutorials/mpgi-workshop-module-4
1164 * CONCOCT uses GNU Parallel
1165 https://media.readthedocs.org/pdf/concoct/latest/concoct.pdf
1167 * If you use SLURM read
1168 https://wiki.hpc.uconn.edu/index.php/Advanced_SLURM
1171 https://qiita.com/hana_shin/items/53c3c78525c9c758ae7c
1173 * Bug fixes and man page updates.
1178 * Experimental simpler job flow control.
1180 * 時間がかかるコマンドを GNU parallel で 並列実行する
1181 https://qiita.com//grohiro/items/4db3fa951a4778c5c479
1183 * Bug fixes and man page updates.
1188 * env_parallel.fish: --session support (alpha quality)
1190 * GNU Parallel was cited in: High-throughput sequencing of murine
1191 immunoglobulin heavy chain repertoires using single side unique
1192 molecular identifiers on an Ion Torrent PGM
1193 https://doi.org/10.18632/oncotarget.25493
1195 * GNU parallel in Japanese Wikipedia
1196 https://ja.wikipedia.org/wiki/GNU_parallel
1198 * Outils de paramétrisation des tâches: lots de tâches, GNU Parallel
1199 https://www.eventbrite.ca/e/inscription-outils-de-parametrisation-des-taches-lots-de-taches-gnu-parallel-et-bqtools-midi-conference-de-50271076142
1201 * Bug fixes and man page updates.
1206 * Minix is supported again.
1208 * Updated graph showing GNU Parallel's overhead per job for each
1209 version. https://www.gnu.org/software/parallel/process-time-j2-1700MHz-3000-1000.pdf
1211 * Intro to Computing at CARC includes introduction to GNU Parallel
1212 http://carc.unm.edu/education--training/workshops-and-seminars.html
1214 * Fast-GBS uses GNU Parallel https://bitbucket.org/jerlar73/fast-gbs/wiki/Home
1216 * Belgium at 10 m resolution in July 2018 http://www.cesbio.ups-tlse.fr/multitemp/?p=14116
1218 * Bug fixes and man page updates.
1223 * parset sets exit code.
1225 * How to install GNU Parallel
1226 https://www.techrepublic.com/videos/how-to-install-gnu-parallel/
1228 * Bug fixes and man page updates.
1233 * The quoting engine has been changed. Instead of using \-quoting GNU
1234 Parallel now uses '-quoting in bash/ash/dash/ksh. This should
1235 improve compatibility with different locales. This is a big change
1236 causing this release to be alpha quality.
1238 * The CPU calculation has changed. By default GNU Parallel uses the
1239 number of CPU threads as the number of CPUs. This can be changed to
1240 the number of CPU cores or number of CPU sockets with
1241 --use-cores-instead-of-threads or --use-sockets-instead-of-threads.
1243 * The detected number of sockets, cores, and threads can be shown with
1244 --number-of-sockets, --number-of-cores, and --number-of-threads.
1246 * env_parallel now support mksh using env_parallel.mksh.
1248 * GNU Parallel is distributed as part of Snippy
1249 https://github.com/tseemann/snippy
1251 * GNU Parallel: Ejecutar comandos simultáneamente en Linux
1252 https://esgeeks.com/gnu-parallel-ejecutar-comandos-simultaneo-linux/
1254 * Parallel download genomic data with GNU-Parallel
1255 https://digibio.blogspot.com/search/label/GNU-Parallel
1257 * Bug fixes and man page updates.
1262 * Deal better with multibyte chars by forcing LC_ALL=C.
1264 * GNU Parallel was introduced in Pincount Podcast:
1265 https://pincountpodcast.com/episodes/29.html
1267 * GNU Parallel was shown on Danish national news for 1.7 seconds: dr.dk
1269 * How to run Linux commands simultaneously with GNU Parallel
1270 https://www.techrepublic.com/article/how-to-run-commands-simultaneously-with-gnu-parallel/#ftag=RSS56d97e7
1272 * Easy parallelization with GNU parallel
1273 http://mpharrigan.com/2016/08/02/parallel.html
1275 * GNU Parallel for mutlithreaded tasks
1276 http://slhogle.github.io/2016/gnu-parallel/
1278 * A GNU Parallel Clustering Demo
1279 https://www.crowdsupply.com/ground-electronics/circumference/updates/a-gnu-parallel-clustering-demo
1281 * 使用 GNU Parallel 提高 Linux 命令行执行效率
1282 https://linux.cn/article-9718-1.html
1284 * Ejecutando tareas desde consola simultáneamente con GNU Parallel
1285 https://poesiabinaria.net/2018/06/ejecutando-tareas-desde-consola-simultaneamente-gnu-parallel/
1287 * Cómo ejecutar varias tareas simultáneamente en el terminal con GNU
1289 https://www.ubuntizando.com/como-ejecutar-varias-tareas-simultaneamente-en-el-terminal-con-gnu-parallel/
1291 * GNU Parallel 활용 가이드 http://genoglobe.kr/kribb/gnu_parallel
1293 * Bug fixes and man page updates.
1298 * --tty allows for more programs accessing /dev/tty in parallel. Some
1299 programs require tty access without using it.
1301 * env_parallel --session will record names in current environment in
1302 $PARALLEL_IGNORED_NAMES and exit. It is only used with env_parallel,
1303 and can work like --record-env but in a single session.
1305 * 35 day course: Linux shell scripting and text processing for big
1306 data https://comquest.in/training
1308 * How To Use Your Entire CPU In Bash With Parallel
1309 https://bash-prompt.net/guides/parallell-bash/
1311 * An easy way to run parallel jobs on Stampede2
1312 https://blog.uta.edu/xus/2017/09/29/an-easy-way-to-run-parallel-jobs-on-stampede2/
1314 * Get more done at the Linux command line with GNU Parallel
1315 https://opensource.com/article/18/5/gnu-parallel
1317 * Save Time with Modern Search Techniques
1318 https://www.sans.org/summit-archives/file/summit-archive-1524582079.pdf
1320 * GNU Parallel: haz más cosas simultáneamente en el terminal
1321 https://blog.desdelinux.net/gnu-parallel-haz-mas-cosas-simultaneamente-en-el-terminal/
1323 * 「今日から使い切る」ための GNU Parallelによる並列処理入門
1324 https://www.slideshare.net/koji_matsuda/gnu-parallel
1326 * Bug fixes and man page updates.
1331 * --csv makes GNU Parallel parse the input sources as CSV. When used
1332 with --pipe it only passes full CSV-records.
1334 * Time in --bar is printed as 1d02h03m04s.
1336 * Optimization of --tee: It spawns a process less per value.
1338 * The GNU Parallel 2018 book is now available:
1339 http://www.lulu.com/shop/ole-tange/gnu-parallel-2018/paperback/product-23558902.html
1341 * Modern pentest tricks for faster, wider, greater engagement (15)
1342 https://conference.hitb.org/hitbsecconf2018ams/materials/D1%20COMMSEC%20-%20Thomas%20Debize%20-%20Modern%20Pentest%20Tricks%20for%20Faster,%20Wider,%20Greater%20Engagements.pdf
1344 * Running many serial jobs efficiently
1345 https://userinfo.surfsara.nl/documentation/running-many-serial-jobs-efficiently
1347 * GNU Parallel: как сохранить результаты нескольких команд для
1348 переменной? http://fliplinux.com/gnu-parallel-6.html
1350 * Running Multiple Commands in Parallel on a GNU Linux
1351 https://www.youtube.com/watch?v=sHpTywpb4_4
1353 * Klaatu covers the documentation of GNU parallel in episode 12x15
1354 http://gnuworldorder.info/
1356 * Bug fixes and man page updates.
1361 * niceload -p can now take multiple pids separated by comma
1363 * --timeout gives a warning when killing processes
1365 * --embed now uses the same code for all supported shells
1367 * --delay can now take arguments like 1h12m07s
1369 * Parallel. Straight from your command line
1370 https://medium.com/@alonisser/parallel-straight-from-your-command-line-feb6db8b6cee
1372 * GNU Parallel was used in POAP-Parallelized Open Babel & Autodock
1373 suite Pipeline https://github.com/inpacdb/POAP
1375 * Pi Cluster Parallel Script First Fire
1376 https://chiefio.wordpress.com/2018/02/23/pi-cluster-parallel-script-first-fire/
1378 * How to Restore MySQL Logical Backup at Maximum Speed
1379 https://www.percona.com/blog/2018/02/22/restore-mysql-logical-backup-maximum-speed/
1381 * Bug fixes and man page updates.
1386 * --embed makes it possible to embed GNU parallel in a shell
1387 script. This is useful if you need to distribute your script to
1388 someone who does not want to install GNU parallel.
1390 * Parallelize Your Large Batches of Small Jobs
1391 https://amito.me/2018/02/Parallelize-Your-Large-Batches-of-Small-Jobs/
1393 * Klaatu expounds upon xargs and talks GNU parallel in episode 12x6
1394 http://gnuworldorder.info/
1396 * How to use parallel to speed up your work
1397 https://mike42.me/blog/how-to-use-parallel-to-speed-up-your-work
1399 * Transient compute clustering with GNU Parallel and sshfs
1400 https://dennismungai.wordpress.com/2018/02/06/transient-compute-clustering-with-gnu-parallel-and-sshfs/
1402 * Useful Examples of ffmpeg and GNU parallel on the command-line
1403 https://dennismungai.wordpress.com/2018/02/06/useful-examples-of-ffmpeg-and-gnu-parallel-on-the-command-line/
1405 * Data Science at the Command Line (Chapter 8.3)
1406 https://www.datascienceatthecommandline.com/
1408 * Bug fixes and man page updates.
1413 * bash / 병렬 https://code.i-harness.com/ko/docs/bash/2a1a
1415 * 15分钟神器gnu parallel 入门观止
1416 http://www.ezilin.com/2018/01/15gnu-parallel.html
1418 * How To Run Multiple Commands In Parallel on Linux
1419 https://www.slashroot.in/how-run-multiple-commands-parallel-linux
1421 * Bug fixes and man page updates.
1426 * env_parset for ash, dash, ksh, sh, zsh
1428 * Automatically create hostgroups if argument ends in @sshlogin
1430 * Tips for running jobs on your VM
1431 https://support.ehelp.edu.au/support/solutions/articles/6000089713-tips-for-running-jobs-on-your-vm#parallel
1433 * Node-local scheduling
1434 https://mogonwiki.zdv.uni-mainz.de/dokuwiki/node_local_scheduling
1436 * GNU Parallel https://docs.computecanada.ca/wiki/GNU_Parallel
1438 * GNU Parallel のエラー処理 https://qiita.com/inouet/items/bfc208668c86caf8ff74
1440 * Using GNU Parallel
1441 https://wiki.ncsa.illinois.edu/display/ROGER/Using+GNU+Parallel
1443 * Bug fixes and man page updates.
1448 * Using GNU Parallel to speed up Google Cloud Infrastructure
1450 https://medium.com/@pczarkowski/using-gnu-parallel-to-speed-up-google-cloud-infrastructure-management-53e5c555ec05
1452 * What is gnu parallel
1453 http://wiki.chpc.ac.za/howto:bioinformatics:gnu-parallel
1455 * Parallel, Scripts, Clusters, & Easy Use
1456 https://chiefio.wordpress.com/2017/11/10/parallel-scripts-clusters-easy-use/
1458 * Bug fixes and man page updates.
1463 * Initial support for XDG Base Directory $XDG_* environment variables.
1465 * Validating half a million TIFF files. Part
1467 https://www.dpoc.ac.uk/2017/08/17/validating-half-a-million-tiff-files-part-two/
1469 * Turing data science class: Cluster computing
1470 https://www.turing.ac.uk/events/masterclass-cluster-computing/
1472 * Butlin:Unix for Bioinformatics - advanced tutorial
1473 https://openwetware.org/wiki/Butlin:Unix_for_Bioinformatics_-_advanced_tutorial
1475 * พยายามใช้ CPU ให้ครบทุก CORE
1476 https://veer66.wordpress.com/2017/09/02/use-multi-core/
1478 * Examples on using GNU Parallel
1479 https://gist.github.com/drmalex07/de8ff1379a560f6d84a0d863e60ae378
1481 * Bug fixes and man page updates.
1486 * Use '--limit myprog' to make a dynamic job limit. Just return 0 to
1487 spawn another job, 1 to not spawn another job, and 2 to kill the
1490 * PARALLEL_RSYNC_OPTS and --rsync-opts sets the options for rsync
1493 * Download all of humble bundle books in parallel
1494 https://til.hashrocket.com/posts/ggt1jaes4y-download-all-of-humble-bundle-books-in-parallel
1496 * Bug fixes and man page updates.
1501 * --line-buffer no longer uses tempfiles. This is faster and makes it
1502 possible for a single process to output more data than there is free
1505 * Vote for GNU Parallel's community ads on
1506 http://meta.unix.stackexchange.com/a/4356/2972
1507 http://meta.askubuntu.com/a/16750/22307
1508 http://meta.serverfault.com/a/9040/45704
1510 * Edit images with GNU Parallel and ImageMagick
1511 https://fedoramagazine.org/edit-images-parallel-imagemagick/
1513 * Running Bash Commands in Parallel
1514 https://dzone.com/articles/running-bash-commands-in-parallel-1
1516 * Today I Learned: GNU parallel, plate tectonics
1517 https://medium.com/@nornagon/today-i-learned-gnu-parallel-plate-tectonics-9fcf24045e63
1519 * GNU Parallel Tutorial
1520 https://www.upf.edu/web/sct-sit/gnu-parallel-tutorial
1522 * Validating half a million TIFF files
1523 http://www.dpoc.ac.uk/2017/08/17/validating-half-a-million-tiff-files-part-two/
1525 * Blender and GNU Parallel
1526 https://www.blendernation.com/2017/08/16/blender-gnu-parallel/
1528 * Quick Introduction to GNU Parallel
1529 https://github.com/LangilleLab/microbiome_helper/wiki/Quick-Introduction-to-GNU-Parallel
1531 * A simple distributed animation render example using GNU Parallel
1532 https://gitlab.com/skororu/scripts
1534 * Do stuff on things, in parallel
1535 http://blogs.fluidinfo.com/terry/2017/08/05/do-stuff-on-things-in-parallel/
1537 * Bash And GNU Parallel NGS Bidniz
1538 http://ino.pm/outreach/presentations/2014/03/genomics-wranglers/index.html
1540 * Using for loop vs Gnu parallel for BLAST
1541 http://www.ettemalab.org/using-for-loop-vs-gnu-parallel-for-blast/
1543 * 并行rsync https://gxnotes.com/article/175866.html
1545 * Bug fixes and man page updates.
1550 * Vote for GNU Parallel's community ads on
1551 http://meta.unix.stackexchange.com/a/4356/2972
1552 http://meta.askubuntu.com/a/16750/22307
1553 http://meta.serverfault.com/a/9040/45704
1555 * GNU Parallel was cited in: Hayabusa: Simple and Fast Full-Text
1556 Search Engine for Massive System Log Data
1557 http://dl.acm.org/citation.cfm?id=3095788
1559 * コマンドの並列化を行える『GNU parallel』の個人的使い方まとめ
1560 https://orebibou.com/2017/07/%E3%82%B3%E3%83%9E%E3%83%B3%E3%83%89%E3%81%AE%E4%B8%A6%E5%88%97%E5%8C%96%E3%82%92%E8%A1%8C%E3%81%88%E3%82%8B%E3%80%8Egnu-parallel%E3%80%8F%E3%81%AE%E5%80%8B%E4%BA%BA%E7%9A%84%E4%BD%BF%E3%81%84/
1562 * How to play and play with thousands of digitized 78rpm records
1563 https://blog.archive.org/2017/07/10/how-to-play-and-play-with-78rpm-record-transfers/
1565 * 并行一个for循环 https://gxnotes.com/article/130363.html
1567 * RFC 8142: GeoJSON Text Sequences
1568 https://sgillies.net/2017/05/18/rfc-8142-geojson-text-sequences.html
1570 * Git auto fetch script I run every day
1571 https://lukas.zapletalovi.com/2017/07/git-auto-fetch-script-i-run-every-day.html
1573 * cores, cpus and threads
1574 http://crazyhottommy.blogspot.de/2017/07/cores-cpus-and-threads.html
1576 * Bug fixes and man page updates.
1581 * The command line can now contain \257 (Macron) or UTF characters
1584 * Vote for GNU Parallel's community ads on
1585 http://meta.unix.stackexchange.com/a/4356/2972
1586 http://meta.askubuntu.com/a/16750/22307
1587 http://meta.serverfault.com/a/9040/45704
1589 * Graph for overhead for 1000 jobs has been updated. It remains
1590 steadily at 3.5 ms per job on a 1.7 GHz machine
1591 https://www.gnu.org/software/parallel/process-time-j2-1700MHz-3000-1000.pdf
1593 * GNU Parallel was cited in: The topology of the directed clique
1594 complex as a network invariant
1595 https://springerplus.springeropen.com/articles/10.1186/s40064-016-2022-y
1597 * GNU Parallel was cited in: Improving Optical Character Recognition
1598 of Finnish Historical Newspapers with a Combination of Fraktur &
1599 Antiqua Models and Image
1600 http://www.ep.liu.se/ecp/131/038/ecp17131038.pdf
1602 * GNU Parallel was cited in: Parallel Execution of Structural Mechanic
1603 Tasks with Use of Small Supercomputers
1604 http://www.sciencedirect.com/science/article/pii/S1877705817324815
1606 * GNU Parallel was cited in: Integration of a Multilingual Preordering
1607 Component into a Commercial SMT Platform
1608 https://www.degruyter.com/downloadpdf/j/pralin.2017.108.issue-1/pralin-2017-0009/pralin-2017-0009.pdf
1610 * Tips For Running Jobs On Your VM
1611 https://support.ehelp.edu.au/support/solutions/articles/6000089713-tips-for-running-jobs-on-your-vm#parallel
1613 * Speed up ML model development with GNU Parallel
1614 https://pzelasko.github.io/posts/speed-up-ml-model-development-with-gnu-parallel
1616 * Parallelizing a Python Function for the Extremely Lazy
1617 http://tdhopper.com/blog/2017/Jun/07/parallelizing-a-python-function-for-the-extremely-lazy/
1620 http://www.android5.online/Android/androidjc/androidkf/gykf/201603/8741.html
1622 * Bug fixes and man page updates.
1627 * --timeout can now use s=second,m=minute,h=hour,d=day.
1629 * --dr is now an alias for --dry-run.
1631 * Vote for GNU Parallel's community ads on
1632 http://meta.unix.stackexchange.com/a/4356/2972
1633 http://meta.askubuntu.com/a/16750/22307
1634 http://meta.serverfault.com/a/9040/45704
1636 * GNU Parallel was cited in: Feature Detection in Visual Cortex during
1637 Different Functional States
1638 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5397493/
1640 * GNU Parallel was cited in: From genotype to phenotype: inferring
1641 relationships between microbial traits and genomic components
1642 https://docserv.uni-duesseldorf.de/servlets/DerivateServlet/Derivate-44622/main.pdf
1644 * GNU Parallel was cited in: Designing fecal microbiota transplant
1645 trials that account for differences in donor stool efficacy
1646 http://biorxiv.org/content/biorxiv/early/2016/07/25/065383.full.pdf
1648 * GNU Parallel was cited in: Assessing the predictability of
1649 anharmonic vibrational modes at the example of hydroxyl groups - ad
1650 hoc construction of localised modes and the influence of structural
1651 solute–solvent motifs
1652 http://pubs.rsc.org/-/content/articlelanding/2017/cp/c7cp01662j#!divAbstract
1654 * GNU Parallel was cited in: Mapping Environmental Influences on
1656 ftp://frapftp.fire.ca.gov/outgoing/transfer/PUC_Map1/Utility%20Fire%20map%201%20final%20review%20and%20development%20report21616.pdf
1658 * GNU Parallel was cited in: Weak vs. Strong Disorder Superfluid-Bose
1659 Glass Transition in One Dimension
1660 https://arxiv.org/pdf/1704.02257.pdf
1662 * GNU Parallel was cited in: Online Automatic Post-editing for MT in a
1663 Multi-Domain Translation Environment
1664 https://www.aclweb.org/anthology/E/E17/E17-1050.pdf
1666 * GNU Parallel was cited in: Cross-calibration of S-NPP VIIRS
1667 moderate-resolution reflective solar bands against MODIS Aqua over
1669 http://www.atmos-meas-tech.net/10/1425/2017/amt-10-1425-2017.pdf
1671 * GNU Parallel was cited in: Scattering Networks: Efficient 2D
1672 Implementation And Application To Melanoma Classification
1673 http://amslaurea.unibo.it/12261/1/nurrito_eugenio_tesi_fisica_magistrale.pdf
1675 * GNU Parallel was cited in: Genome-scale detection of positive
1676 selection in 9 primates predicts human-virus evolutionary conflicts
1677 http://biorxiv.org/content/biorxiv/early/2017/04/27/131680.full.pdf
1679 * GNU Parallel is used in: Creates a speech dataset for deep learning
1680 https://github.com/jupiter126/Create_Speech_Dataset
1682 * GNU Parallel is used in: Parse and process the demixing secrets
1683 dataset (DSD100) https://github.com/faroit/dsdtools
1685 * First glance at the gnu parallel utility
1686 https://ibiscybernetics.com/blog/2017-04-05.html
1688 * Installing parallel from source
1689 https://bitsanddragons.wordpress.com/2017/05/03/installing-parallel-from-source/
1691 * How to run command or code in parallel in bash shell under Linux or
1693 https://www.cyberciti.biz/faq/how-to-run-command-or-code-in-parallel-in-bash-shell-under-linux-or-unix/
1695 * Parallel Serial Jobs Using GNU Parallel
1696 http://www.hpc.lsu.edu/training/weekly-materials/2017-Spring/gnuparallel-Feb2017.pdf
1698 * GNU Parallel or How to list millions of S3 objects
1699 https://joeray.me/gnu-parallel-how-to-list-millions-objects.html
1701 * Which Is the Best Tool for Copying a Large Directory Tree Locally?
1702 http://arjon.es/2017/05/11/which-is-the-best-tool-for-copying-a-large-directory-tree-locally/
1704 * Bug fixes and man page updates.
1709 * --halt supports done in addition to success and fail.
1711 * parset will set variables in parallel in Bash.
1713 * Perl 5.6 on Irix is no longer supported.
1715 * Vote for GNU Parallel's community ads on
1716 http://meta.unix.stackexchange.com/a/4356/2972
1717 http://meta.askubuntu.com/a/16750/22307
1718 http://meta.serverfault.com/a/9040/45704
1720 * GNU Parallel was cited in: Halvade-RNA: Parallel variant calling
1721 from transcriptomic data using MapReduce
1722 http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0174575
1724 * GNU Parallel was cited in: StrAuto: automation and parallelization
1725 of STRUCTURE analysis
1726 http://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-017-1593-0
1728 * GNU Parallel was cited in: Trespassing the Boundaries: Labeling
1729 Temporal Bounds for Object Interactions in Egocentric Video
1730 https://128.84.21.199/pdf/1703.09026.pdf
1732 * GNU Parallel is used in: https://github.com/lucascbeyeler/zmbackup
1734 * Using GNU Parallel
1735 https://wiki.ncsa.illinois.edu/display/ROGER/Using+GNU+Parallel
1737 * Find and xargs and parallel
1738 http://helpful.knobs-dials.com/index.php/Find_and_xargs_and_parallel#Parallel
1740 * Quick Introduction to GNU Parallel
1741 https://github.com/mlangill/microbiome_helper/wiki/Quick-Introduction-to-GNU-Parallel
1743 * Data science at the command line https://www.slideshare.net/sharatsc/data-science-at-the-command-line
1745 * Bedtools笔记 http://www.jianshu.com/p/67b0665490ac
1747 * Bug fixes and man page updates.
1752 * --rpl can now take arguments by adding '(regexp)' in the replacement
1755 * Vote for GNU Parallel's community ads on
1756 http://meta.unix.stackexchange.com/a/4356/2972
1757 http://meta.askubuntu.com/a/16750/22307
1758 http://meta.serverfault.com/a/9040/45704
1760 * GNU Parallel was cited in: shmlast: An improved implementation of
1761 Conditional Reciprocal Best Hits with LAST and Python
1762 https://joss.theoj.org/papers/3cde54de7dfbcada7c0fc04f569b36c7
1764 * GNU Parallel was cited in: Prediction of relativistic electron flux
1765 in the Earth’s outer radiation belt at geostationary orbit by
1767 https://link.springer.com/article/10.1134/S0016793217010108
1769 * GNU Parallel was cited in: Higher likelihood of multiple bit-flips
1770 due to neutron-induced strikes on logic gates
1771 https://arxiv.org/pdf/1612.08239.pdf
1773 * GNU Parallel was cited in: A Monte Carlo Resampling Approach for the
1774 Calculation of Hybrid Classical and Quantum Free Energies
1775 http://pubs.acs.org/doi/pdfplus/10.1021/acs.jctc.6b00506
1777 * GNU Parallel was cited in: Learning string distance with smoothing
1778 for OCR spelling correction
1779 https://link.springer.com/article/10.1007/s11042-016-4185-5
1781 * GNU Parallel was cited in: The Breakdown of String Perturbation
1782 Theory for Many External Particles
1783 https://arxiv.org/pdf/1611.08003.pdf
1785 * GNU Parallel was cited in: Operations Research Applications in
1787 https://dspace.library.colostate.edu/bitstream/handle/11124/170687/Johnson_mines_0052E_11207.pdf?sequence=1&isAllowed=y
1789 * GNU Parallel was cited in: Parallel Computing: GNU Parallel
1790 http://www.blopig.com/blog/2017/02/parallel-computing-gnu-parallel/
1792 * Stig Sandbeck Mathisen: Change All The Passwords (Again)
1793 http://garf.us/2017/02/stig-sandbeck-mathisen-change-all-the-passwords-again/
1795 * Trabalhando como Paralelismo no Bash usando o GNU Parallel
1796 http://www.beyeler.com.br/2017/03/trabalhando-como-paralelismo-no-bash-usando-o-gnu-parallel/
1798 * GNU parallel と SQL*Loader 組み合わせ実行例
1799 https://blogs.oracle.com/LetTheSunShineIn/entry/gnu_parallel_%E3%81%A8_sql_loader
1801 * Bug fixes and man page updates.
1806 * env_parallel now supports /bin/sh, ash, dash.
1808 * --tee will pipe all data to all jobs. Used with --pipe/--pipepart
1809 and :::. Small example: seq 3333 | parallel --pipe --tee --tag 'grep
1810 {} | wc -l' ::: {0..9}
1812 * If --results {replstr} ends in /: save in dir. Otherwise save as
1813 file. Example: parallel --results {} echo {} ::: a b c
1815 * Vote for GNU Parallel's community ads on
1816 http://meta.unix.stackexchange.com/a/4356/2972
1817 http://meta.askubuntu.com/a/16750/22307
1818 http://meta.serverfault.com/a/9040/45704
1820 * GNU Parallel was cited in: Low-delay forwarding with multiple
1821 candidates for VANETs using multi-criteria decision making
1822 http://ieeexplore.ieee.org/document/7835961/
1824 * GNU Parallel was cited in: An Integrated Simulator and Dataset that
1825 Combines Grasping and Vision for Deep Learning
1826 https://arxiv.org/pdf/1702.02103.pdf
1828 * GNU Parallel was cited in: A Bayesian model selection approach for
1829 identifying differentially expressed transcripts from RNA sequencing
1830 data http://onlinelibrary.wiley.com/doi/10.1111/rssc.12213/full
1832 * GNU Parallel was cited in: The impact of copy number variation on
1833 gout, and the apple genome
1834 https://ourarchive.otago.ac.nz/bitstream/handle/10523/7060/BoocockJames2016MSc.pdf?sequence=3
1836 * GNU Parallel was cited in: Reaction rates for reaction-diffusion
1837 kinetics on unstructured meshes
1838 http://aip.scitation.org/doi/10.1063/1.4975167
1840 * GNU Parallel was cited in: Modeling prediction error improves power
1841 of transcriptome-wide association studies
1842 http://biorxiv.org/content/biorxiv/early/2017/02/14/108316.full.pdf
1844 * GNU Parallel was cited in: Proper experimental design requires
1845 randomization/balancing of molecular ecology experiments
1846 http://biorxiv.org/content/biorxiv/early/2017/02/17/109280.full.pdf
1848 * GNU Parallel was cited in: Experiment-based thermal micromagnetic
1849 simulations of the magnetization reversal for ns-range clocked
1851 http://aip.scitation.org/doi/full/10.1063/1.4974021
1853 * GNU Parallel was cited in: The University of Edinburgh’s systems
1854 submission to the MT task at IWSLT
1855 http://workshop2016.iwslt.org/downloads/IWSLT_2016_paper_27.pdf
1857 * Fast-GBS uses GNU Parallel: https://bitbucket.org/jerlar73/fast-gbs
1859 * Job: DevOps Engineer/Senior Systems Administrator in New York, New
1861 http://rockefeller.jobs/new-york-ny/devops-engineersenior-systems-administrator/2DB3408EAC9E4617AD238550F31C7641/job/
1863 * Training in GNU Parallel:
1864 https://www.carc.unm.edu/education-outreach/workshops--training/
1866 * Training in GNU Parallel:
1867 http://www.hpc.lsu.edu/training/registration.php?topic=Parallel%20Serial%20Jobs%20Using%20GNU%20Parallel&date=February%2022,%202017&time=9:00%20AM%20-%2011:00%20AM&place=307%20Frey&deadline=2017-02-21%2016:30:00
1869 * Batch Convert Images from PNG to JPEG
1870 http://coreygoldberg.blogspot.dk/2017/02/batch-convert-images-from-png-to-jpeg.html
1872 * Accelerating Oxford Nanopore Basecalling
1873 http://fowlerlab.org/2017/01/26/accelerating-oxford-nanopore-basecalling/
1875 * parallel и imagemagick в loop на bash
1876 https://www.linux.org.ru/forum/development/13190247
1878 * Bug fixes and man page updates.
1888 * sql now uses a temporary credentials file for MySQL to avoid
1891 * --sqlmaster and --sqlworker have been reworked.
1893 * --sqlworker only reads from the DBURL: any command and any arguments
1896 * --sqlmaster +DBURL will append different commands to the DBURL and
1897 not erase the table.
1899 * If --results contain a replacement string, no tree structure with
1900 args will be generated.
1902 * --fg --tmux or --fg --tmuxpane will connect to the tmux.
1904 * GNU Parallel was cited in: Fast, Automated Indoor Light Detection,
1905 Classification, and Measurement
1906 https://www2.eecs.berkeley.edu/Pubs/TechRpts/2016/EECS-2016-212.pdf
1908 * GNU Parallel was cited in: Unbiased RNA Shotgun Metagenomics in
1909 Social and Solitary Wild Bees Detects Associations with Eukaryote
1910 Parasites and New Viruses
1911 http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0168456
1913 * GNU Parallel was cited in: Almost Event-Rate Independent Monitoring
1914 of Metric Temporal Logic
1915 http://people.inf.ethz.ch/trayteld/papers/tacas17-aerial/aerial.pdf
1917 * 使用GNU parallel命令并行预处理数据: https://blog.razrlele.com/p/1843
1919 * GNU Parallel as a queuing system:
1920 http://puntoblogspot.blogspot.com/2017/01/gnu-parallel-as-queuing-system.html
1922 * AWS re:Invent 2016: Deep Dive on Amazon Elastic File System (STG202)
1924 http://www.slideshare.net/AmazonWebServices/aws-reinvent-2016-deep-dive-on-amazon-elastic-file-system-stg202
1925 and https://youtu.be/PlTuJx4VnGw?t=30m16s
1927 * Bug fixes and man page updates.
1932 * --results foo.csv will save output as a CSV-file. Can be directly
1933 imported into R or LibreCalc.
1935 * When using --pipepart a negative --block-size is not interpreted as
1936 a block size but as the number of blocks each jobslot should have.
1938 * --sqlmaster/--sqlandworker will append jobs to the DBURL if the
1939 DBURL is prepended with +.
1941 * GNU Parallel was cited in: A cloud-based workflow to quantify
1942 transcript-expression levels in public cancer compendia
1943 http://www.nature.com/articles/srep39259
1945 * GNU Parallel was cited in: Determination of crystal structures of
1946 proteins of unknown identity using a marathon molecular replacement
1947 procedure: Structure of Stenotrophomonas maltophilia
1948 phosphate-binding protein
1949 https://www.researchgate.net/publication/308186413_Determination_of_crystal_structures_of_proteins_of_unknown_identity_using_a_marathon_molecular_replacement_procedure_Structure_of_Stenotrophomonas_maltophilia_phosphate-binding_protein
1951 * GNU Parallel was cited in: Large-scale benchmarking reveals false
1952 discoveries and count transformation sensitivity in 16S rRNA gene
1953 amplicon data analysis methods used in microbiome studies
1954 http://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-016-0208-8
1956 * GNU Parallel was cited in: Decomposing Images into Layers via
1958 https://cs.gmu.edu/~ygingold/singleimage/Decomposing%20Images%20into%20Layers%20via%20RGB-space%20Geometry%20(Tan%20et%20al%202016%20TOG)%20small.pdf
1960 * Transient compute clustering with GNU Parallel and sshfs
1961 https://gist.github.com/Brainiarc7/24c966c8a001061ee86cc4bc05826bf4
1963 * 4 Ways to Batch Convert Your PNG to JPG and Vice-Versa
1964 http://www.tecmint.com/linux-image-conversion-tools/
1966 * All's Fair in Love and Distributed Storage
1967 http://cohesity.com/blog/alls-fair-love-distributed-storage/
1969 * How can I use GNU Parallel to run a lot of commands in parallel
1970 https://www.msi.umn.edu/support/faq/how-can-i-use-gnu-parallel-run-lot-commands-parallel
1972 * 정해영의 블로그 - JEONG Haeyoung's blog
1973 http://blog.genoglobe.com/2016/11/gnu-parallel.html
1975 * 在Linux下将PNG和JPG批量互转的四种方法
1976 http://os.51cto.com/art/201612/524182.htm
1978 * Running in parallel http://tomkimpson.com/howto/gnuparallel/
1980 * Taco Bell Parallel Programming
1981 https://giorgos.sealabs.net/taco-bell-parallel-programming.html
1983 * Bug fixes and man page updates.
1988 * --record-env can now be used with env_parallel for bash, ksh, pdksh,
1991 * GNU Parallel was cited in: An improved implementation of Conditional
1992 Reciprocal Best Hits with LAST and Python
1993 https://pypi.python.org/pypi/shmlast/1.0.3
1995 * GNU Parallel was cited in: miRPathDB: a new dictionary on microRNAs
1997 http://nar.oxfordjournals.org/content/early/2016/10/13/nar.gkw926.full
1999 * GNU/Parallel – Run multiple commands simultaneously
2000 https://vinusumi.wordpress.com/2016/11/08/gnuparallel-run-multiple-commands-simultaneously/
2002 * Tutorial: Parallel web scraping with CasperJS and GNU Parallel
2003 http://g-liu.com/blog/2016/10/tutorial-parallel-web-scraping-with-casperjs-and-gnu-parallel/
2005 * Bug fixes and man page updates.
2010 * First command no longer gets stdin as it causes unpredictable issues.
2012 * GNU Parallel was cited in: Efficiently parallelized modeling of
2013 tightly focused, large bandwidth laser pulses
2014 https://arxiv.org/pdf/1609.08146v1.pdf
2016 * How to crunch lots of geodata in parallel
2017 http://blog.faraday.io/how-to-crunch-lots-of-geodata-in-parallel/
2019 * GNU parallel is my new toaster
2020 http://amedee.me/gnu-parallel-is-my-new-toaster/index.html
2022 * Bug fixes and man page updates.
2027 * parcat - cat files or fifos in parallel
2029 * GNU Parallel was cited in: Velocity: A Netflow Based Optimized
2031 https://mospace.umsystem.edu/xmlui/bitstream/handle/10355/50842/Thesis_2016_Pakhare.pdf?sequence=1&isAllowed=y
2033 * GNU Parallel was cited in: Viral deep sequencing needs an adaptive
2034 approach: IRMA, the iterative refinement meta-assembler
2035 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5011931/
2037 * Using GNU Parallel and ImageMagick for Conversions
2038 https://blog.fractalcomic.com/tutorials/using-gnu-parallel-and-imagemagick-for-conversions/
2040 * Training in GNU Parallel
2041 http://www.cism.ucl.ac.be/Services/Formations/parcomp.pdf
2043 * Chown Ceph OSD data directory using GNU Parallel
2044 http://blog.widodh.nl/2016/08/chown-ceph-osd-data-directory-using-gnu-parallel/
2046 * FastGBS uses GNU Parallel https://bitbucket.org/jerlar73/fastgbs
2048 * dDocent: A guide to ddRAD sequencing
2049 https://ddocent.wordpress.com/ddocent-pipeline-user-guide/
2051 * SOFTWARE GNU Parallel
2052 http://msi-riss.readthedocs.io/en/latest/software/gnu-parallel.html
2054 * Bug fixes and man page updates.
2059 * --tmuxpane opens jobs in panes in tmux. Useful if you want to
2060 monitor progress of less than 100 simultaneous jobs.
2062 * --linebuffer now treats \r as line ending, too.
2064 * Perl changes forces use of floats to be given with leading zero, so
2067 * --xapply renamed to --link.
2069 * Support for pdksh will fade until someone packages it for Ubuntu 16.
2071 * GNU Parallel was cited in: Exome sequencing of geographically
2072 diverse barley landraces and wild relatives gives insights into
2073 environmental adaptation
2074 http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.3612.html?WT.feed_name=subjects_genetics#references
2076 * GNU Parallel was cited in: Vision-Enhanced Lidar Odometry and
2077 Mapping https://www.ri.cmu.edu/pub_files/2016/8/DLL-thesis.pdf
2079 * Easy parallelization with GNU parallel
2080 http://mpharrigan.com/2016/08/02/parallel.html
2082 * Facebook V: Predicting Check Ins, Winner's Interview: 2nd Place,
2084 http://blog.kaggle.com/2016/08/02/facebook-v-predicting-check-ins-winners-interview-2nd-place-markus-kliegl/
2087 http://www.manitou-mail.org/blog/2016/07/parallel-import/
2089 * Large file batch processing using NodeJs and GNU Parallel
2090 http://www.zacorndorff.com/2016/07/27/large-file-batch-processing-using-nodejs-and-gnu-parallel/
2092 * Bug fixes and man page updates.
2097 * env_parallel is now ready for wider testing. It is still beta
2100 * env_parallel is heavily modified for all shells and testing has been
2103 * Selectively choosing what to export using --env now works for
2104 env_parallel (bash, csh, fish, ksh, pdksh, tcsh, zsh).
2106 * --round-robin now gives more work to a job that processes faster
2107 instead of same amount to all jobs.
2109 * --pipepart works on block devices on GNU/Linux.
2111 * GNU Parallel was cited in: HybPiper: Extracting Coding Sequence and
2112 Introns for Phylogenetics from High-Throughput Sequencing Reads
2113 Using Target Enrichment
2114 http://www.bioone.org/doi/full/10.3732/apps.1600016
2116 * GNU Parallel was cited in: StrAuto - Automation and Parallelization
2117 of STRUCTURE Analysis
2118 http://www.crypticlineage.net/download/strauto/strauto_doc.pdf
2120 * GNU Parallel was cited in: Tools and techniques for computational
2122 http://gigascience.biomedcentral.com/articles/10.1186/s13742-016-0135-4
2124 * GNU Parallel was cited in: FlashPCA: fast sparse canonical
2125 correlation analysis of genomic data
2126 http://biorxiv.org/content/biorxiv/suppl/2016/04/06/047217.DC1/047217-1.pdf
2128 * GNU Parallel was cited in: Math Indexer and Searcher under the Hood:
2129 Fine-tuning Query Expansion and Unification Strategies
2130 http://research.nii.ac.jp/ntcir/workshop/OnlineProceedings12/pdf/ntcir/MathIR/05-NTCIR12-MathIR-RuzickaM.pdf
2132 * GNU Parallel was cited in: The Evolution and Fate of
2133 Super-Chandrasekhar Mass White Dwarf Merger Remnants
2134 http://arxiv.org/pdf/1606.02300.pdf
2136 * GNU Parallel was cited in: Evaluation of Coastal Scatterometer
2138 https://mdc.coaps.fsu.edu/scatterometry/meeting/docs/2016/Thu_AM/coastal-poster.pdf
2140 * GNU Parallel was used in: https://github.com/splitice/bulkdnsblcheck
2142 * The iconv slurp misfeature
2143 http://www.openfusion.net/linux/iconv_slurp_misfeature
2145 * แบบว่า CPU เหลือ https://veer66.wordpress.com/2016/06/15/gnu-parallel/
2147 * Bug fixes and man page updates.
2152 * $PATH can now be exported using --env PATH. Useful if GNU Parallel
2153 is not in your path on remote machines.
2155 * If --block is left out, --pipepart will use a block size that will
2156 result in 10 jobs per jobslot.
2158 * The cookie from 2016-01-04 was won by Morgan Rodgers on the
2159 2016-06-06 after 5 months.
2161 * Vote for GNU Parallel's community ad on
2162 https://meta.askubuntu.com/questions/14925/community-promotion-ads-2016/15046#15046
2164 * GNU Parallel was cited in: Genotypic Resistance Tests Sequences
2165 Reveal the Role of Marginalized Populations in HIV-1 Transmission in
2166 Switzerland http://www.nature.com/articles/srep27580
2168 * GNU Parallel was cited in: A Deep-Learning Approach for Operation of
2169 an Automated Realtime Flare Forecast
2170 https://arxiv.org/pdf/1606.01587.pdf
2172 * Unix parallel: Populating all the USB sticks
2173 http://www.markhneedham.com/blog/2016/06/01/unix-parallel-populating-all-the-usb-sticks/
2175 * GNU Parallel is a fantastic utility https://www.dray.be/parallel/
2177 * Combining a large number of VCF files
2178 https://gtamazian.com/2016/06/16/combining-a-large-number-of-vcf-files/
2180 * Useful Scraping Techniques
2181 http://blog.apps.npr.org/2016/06/17/scraping-tips.html
2183 * Tools of the trade
2184 http://onox.com.br/2015/05/tools-of-the-trade/#more-198
2186 * Armslist scraper https://github.com/nprapps/armslist-scraper/
2188 * Bug fixes and man page updates.
2193 * niceload --net pauses the program if the internet connection is
2196 * Vote for GNU Parallel's community ad on
2197 https://meta.askubuntu.com/questions/14925/community-promotion-ads-2016/15046#15046
2199 * Updated speed comparison between versions
2200 https://www.gnu.org/software/parallel/process-time-j2-1700MHz-3000-1000.pdf
2202 * GNU Parallel was cited in: Improving computation efficiency by
2203 parallel programming
2204 http://www.irbis-nbuv.gov.ua/cgi-bin/irbis_nbuv/cgiirbis_64.exe?C21COM=2&I21DBN=UJRN&P21DBN=UJRN&IMAGE_FILE_DOWNLOAD=1&Image_file_name=PDF/ape_2013_3_44.pdf
2206 * GNU Parallel was cited in: A supernova feedback implementation for
2207 the astrophysical simulation software Arepo
2208 https://arxiv.org/abs/1604.06071
2210 * GNU Parallel was cited in: Lorenz-Mie theory for 2D scattering and
2211 resonance calculations https://arxiv.org/pdf/1505.07691v2.pdf
2213 * GNU Parallel was cited in: Host-pathogen co-evolution and the
2214 emergence of broadly neutralizing antibodies in chronic infections
2215 https://arxiv.org/abs/1512.06296
2217 * GNU Parallel was cited in: Pacific People, Metabolic Disease and
2218 Evolutionary Processes: a mitochondrial DNA study
2219 https://otago.ourarchive.ac.nz/handle/10523/6340
2221 * GNU Parallel was cited in: The effect of domain modeling on
2222 efficiency of planning: Lessons from the Nomystery domain
2223 http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=7407131
2225 * GNU Parallel was cited in: Oops, my tests broke the build: An
2226 analysis of Travis CI builds with GitHub
2227 https://peerj.com/preprints/1984/
2229 * GNU Parallel was cited in: Drosophila Muller F Elements Maintain a
2230 Distinct Set of Genomic Properties Over 40 Million Years of
2231 Evolution http://www.g3journal.org/content/5/5/719.full.pdf+html
2233 * GNU Parallel was cited in: An Empirical Comparison of Neural
2234 Architectures for Reinforcement Learning in Partially Observable
2236 http://biorxiv.org/content/biorxiv/early/2016/03/24/022707.full.pdf
2238 * GNU Parallel was cited in: PleaseTM: Enabling Transaction Conflict
2239 Management in Requester-wins Hardware Transactional Memory
2240 http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=7446072
2242 * GNU Parallel was cited in: EASE-MM: Sequence-Based Prediction of
2243 Mutation-Induced Stability Changes with Feature-Based Multiple
2245 http://www.sciencedirect.com/science/article/pii/S0022283616000310
2247 * GNU Parallel was cited in: A new orthology assessment method for
2248 phylogenomic data: Unrooted Phylogenetic Orthology
2249 http://mbe.oxfordjournals.org/content/early/2016/04/06/molbev.msw069.short
2250 https://github.com/ballesterus/UPhO
2252 * GNU Parallel was cited in: Distinctive Interest Point Selection for
2253 Efficient Near-duplicate Image Retrieval
2254 http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=7459172
2256 * GNU Parallel was cited in: The Evolution of C Programming Practices:
2257 A Study of the Unix Operating System 1973–2015
2258 https://dl.acm.org/citation.cfm?id=2884799 (It has the cutest
2259 thumbnail graphs I have ever seen scattered all over the text)
2261 * GNU Parallel was cited in: Data processing pipeline for serial
2262 femtosecond crystallography at SACLA
2263 http://journals.iucr.org/j/issues/2016/03/00/zw5001/index.html
2265 * GNU Parallel was cited in: Reconstruction of Fine-Scale Auroral
2266 Dynamics http://arxiv.org/pdf/1512.01460.pdf
2268 * GNU Parallel was cited in: Genomic legacy of the African cheetah,
2270 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4676127/pdf/13059_2015_Article_837.pdf
2272 * GNU Parallel was cited in: Don’t Forget to Lock the Back Door! A
2273 Characterization of IPv6 Network Security Policy
2274 http://benign-research-probe2.eecs.umich.edu/ndss16_ipv6_final.pdf
2276 * GNU Parallel was cited in: Comprehensive Annotation of the
2277 Parastagonospora nodorum Reference Genome Using Next-Generation
2278 Genomics, Transcriptomics and Proteogenomics
2279 http://journals.plos.org/plosone/article/asset?id=10.1371%2Fjournal.pone.0147221.PDF
2281 * GNU Parallel was cited in: How attention influences perceptual
2282 decision making: Single-trial EEG correlates of drift-diffusion
2283 model parameters http://www.cidlab.com/prints/nunez2016attention.pdf
2285 * GNU Parallel was cited in: Telomere And Proximal Sequence Analysis
2286 Using High-Throughput Sequencing Reads
2287 http://repository.upenn.edu/edissertations/1460/
2289 * GNU Parallel was cited in: AT-GIS: Highly Parallel Spatial Query
2290 Processing with Associative Transducers
2291 http://lsds.doc.ic.ac.uk/sites/default/files/ATGIS-SIGMOD16.pdf
2293 * GNU Parallel was cited in: PVAIR: Partial Variable Assignment
2294 InterpolatoR http://verify.inf.usi.ch/sites/default/files/main-2.pdf
2296 * GNU Parallel was cited in: Comparative Cladistics: Fossils,
2297 Morphological Data Partitions and Lost Branches in the Fossil Tree
2298 of Life http://opus.bath.ac.uk/43955/
2300 * GNU Parallel was cited in: Shannon: An Information-Optimal de
2301 NovoRNA-Seq Assembler
2302 http://biorxiv.org/content/biorxiv/early/2016/02/09/039230.full.pdf
2304 * GNU Parallel was cited in: Adaptive Measure-Theoretic Parameter
2305 Estimation for Coastal Ocean Modeling
2306 https://repositories.lib.utexas.edu/handle/2152/32435
2308 * GNU Parallel was cited in: Computational Design of DNA-Binding
2310 http://link.springer.com/protocol/10.1007/978-1-4939-3569-7_16
2312 * GNU Parallel was cited in: Reference genotype and exome data from an
2313 Australian Aboriginal population for health-based research
2314 http://www.nature.com/articles/sdata201623
2316 * GNU Parallel was cited in: Do aye-ayes echolocate?
2317 http://biorxiv.org/content/biorxiv/early/2016/04/11/048165.full.pdf
2319 * GNU Parallel was cited in: Functional enrichments of disease
2320 variants across thousands of independent loci in eight diseases
2321 http://biorxiv.org/content/biorxiv/early/2016/04/11/048066.full.pdf
2323 * GNU Parallel was cited in: From genomes to phenotypes: Traitar, the
2324 microbial trait analyzer
2325 http://biorxiv.org/content/biorxiv/early/2016/03/12/043315.full.pdf
2327 * GNU Parallel was mentioned in: Fast Playback Framework for Analysis
2328 of Ground-Based Doppler Radar Observations Using MapReduce
2330 http://journals.ametsoc.org/doi/pdf/10.1175/JTECH-D-15-0118.1
2332 * NCBI blast tutorial
2333 https://github.com/enormandeau/ncbi_blast_tutorial
2335 * Distributed Preservation Made Simple
2336 https://blog.archive.org/2016/02/26/distributed-preservation-made-simple/
2338 * Parallel Jobs in Luigi http://rjbaxley.com/posts/2016/03/13/parallel_jobs_in_luigi.html
2340 * Bug fixes and man page updates.
2345 * :::+ and ::::+ work like ::: and :::: but links this input source to
2346 the previous input source in a --xapply fashion. Contrary to
2347 --xapply values do not wrap: The shortest input source determines
2350 * --line-buffer --keep-order now outputs continously from the oldest
2351 job still running. This is more what you would expect than the
2352 earlier behaviour where --keep-order had no effect with
2355 * env_parallel supports tcsh, csh, pdksh. In fish it now supports
2356 arrays. In csh/tcsh it now supports variables, aliases, and arrays
2357 with no special chars. In pdksh it supports aliases, functions,
2358 variables, and arrays.
2360 * Function exporting on Mac OS X works around old Bash version.
2362 * Better CPU detection on OpenIndiana.
2364 * GNU Parallel was cited in: Automatic Methods for Assisted
2366 https://www.researchgate.net/publication/297738658_Automatic_Methods_for_Assisted_Recruitment
2368 * GNU Parallel was cited in: Reinterpretation of ATLAS 8 TeV searches
2369 for Natural SUSY with a R-Sneutrino LSP
2370 http://arxiv.org/pdf/1603.06130.pdf
2372 * GNU Parallel was cited in: An Operational Radiometric Landsat
2373 Preprocessing Framework for Large-Area Time Series Applications
2374 https://www.uni-trier.de/fileadmin/fb6/prof/FER/Publikationen/frantz_et_al_ieee-tgrs-2016-post-print.pdf
2376 * A basic demo of how GNU Parallel can speed up execution of commands
2377 https://www.youtube.com/watch?v=kl8LO2jcvMc
2379 * qbatch uses GNU Parallel: https://pypi.python.org/pypi/qbatch/1.0rc2
2381 * FaceCrop uses GNU Parallel: https://github.com/EderSantana/FaceCrop
2383 * Parallel Processing with Catmandu
2384 https://librecatproject.wordpress.com/2016/04/20/parallel-processing-with-catmandu/
2387 http://staypython.blogspot.dk/2016/04/gnu-parallel.html
2389 * Bug fixes and man page updates.
2394 * env_parallel is a function that exports the environment (functions,
2395 aliases, variables, and arrays) to GNU Parallel. Run 'man
2396 env_parallel' for details.
2398 * niceload --prg now searches for substrings if no process with the
2401 * GNU Parallel was cited in: Random Forest DBSCAN for USPTO Inventor
2402 Name Disambiguation http://arxiv.org/pdf/1602.01792.pdf
2404 * GNU Parallel was mentioned (with wrong citation) in: Dual Level
2405 Parallel Computations for LargeScale High-Fidelity Database to
2406 Design Aerospace Vehicles
2407 http://www.nas.nasa.gov/assets/pdf/papers/Guruswamy_2013_DualLevelParallelComputations.pdf
2409 * Using ‘Parallel’ in Unix
2410 https://shearnrylan.wordpress.com/2016/02/22/using-parallel-in-unix/
2412 * JPEG Squish uses (and co-distributes) GNU Parallel:
2413 http://dantidswell.co.uk/jpeg-squish/
2415 * Bug fixes and man page updates.
2420 * Vote for new community on Superuser, Ask Ubuntu, Unix&Linux
2421 http://meta.superuser.com/questions/11127/community-promotion-ads-2016/11225#11225
2422 http://meta.askubuntu.com/questions/14925/community-promotion-ads-2016/15046#15046
2423 http://meta.unix.stackexchange.com/questions/3854/community-promotion-ads-2016/3893#3893
2425 * Daily Quick Tip: parallel
2426 https://medium.com/@jacaetevha/daily-quick-tip-parallel-8772435f6582
2428 * Downloading a list of URLs
2429 http://blog.gypsydave5.com/2016/02/04/xargs-and-curl/
2431 * Using GNU Parallel and ImageMagick for Conversions
2432 http://blog.fractalcomic.com/tutorials/using-gnu-parallel-and-imagemagick-for-conversions/
2434 * Running bash commands in parallel
2435 http://linuxcommando.blogspot.dk/2016/01/running-bash-commands-in-parallel.html
2437 * parallel processing in PDAL
2438 https://smathermather.wordpress.com/2016/01/28/parallel-processing-in-pdal/
2440 * A Million Text Files And A Single Laptop
2441 http://randyzwitch.com/gnu-parallel-medium-data/
2443 * 「今日から使い切る」ための GNU Parallelによる並列処理入門
2444 http://www.slideshare.net/koji_matsuda/gnu-parallel
2446 * Bug fixes and man page updates.
2451 * --sql DBURL uses DBURL as storage for jobs and output. It does not
2452 run any jobs so it requires at least one --sqlworker. DBURL must
2455 * --sqlworker DBURL gets jobs from DBURL and stores the result back to
2458 * --sqlandworker is a shorthand for --sql and --sqlworker.
2460 * --sqlworker requires the output of a single job to fit in memory.
2462 * --results now also saves a file called 'seq' containing the sequence
2465 * If $PARALLEL_ENV is a file, then that file will be read into
2468 * man parallel_tutorial has been given an overhaul.
2470 * --workdir now accepts replacementstrings.
2472 * GNU Parallel was cited in: Possum - A Framework for
2473 Three-Dimensional Reconstruction of Brain Images from Serial
2474 Sections http://link.springer.com/article/10.1007/s12021-015-9286-1
2476 * GNU Parallel was cited in: A Genetic Algorithm for the selection of
2477 structural MRI features for classification of Mild Cognitive
2478 Impairment and Alzheimer's Disease
2479 http://ieeexplore.ieee.org/xpl/abstractReferences.jsp?tp=&arnumber=7359909&url=http%3A%2F%2Fieeexplore.ieee.org%2Fxpls%2Fabs_all.jsp%3Farnumber%3D7359909
2481 * GNU Parallel was cited in: The Effect of Domain Modeling on
2482 Performance of Planning Algorithms
2483 http://isaim2016.cs.virginia.edu/papers/ISAIM2016_Bartak_Vodrazka.pdf
2485 * Plotting time tables for jobs run by GNU Parallel
2486 https://github.com/ziotom78/plot_joblog
2488 * GNU Parallel was used in: Mission Impossible: you have 1 minute to
2489 analyze the Ebola Genome https://www.biostars.org/p/119397
2491 * GNU Parallel is used in LAST: http://last.cbrc.jp/
2493 * Distributed Log Search Using GNU Parallel
2494 http://codehate.com/blog/2015/12/01/distributed-log-search-using-gnu-parallel/
2496 * Bug fixes and man page updates.
2501 * --transfer is now an alias for --transferfile {}.
2503 * --transferfile works like --transfer, but takes an argument like
2504 --return. This makes it possible to combine transferring files
2505 with multiple input sources: parallel -S server --tf {1} wc {2}
2506 {1} ::: * ::: -l -w -c
2508 * total_jobs() can now be used in {= =}: parallel echo job {#} of '{=
2509 $_=total_jobs() =}' ::: {1..50}
2511 * GNU Parallel was cited in: Evolution and Learning in Heterogeneous
2513 http://research.gold.ac.uk/15078/1/COM_thesis_JonesD_2015.pdf
2515 * GNU Parallel was cited in: Achieving Consistent Doppler Measurements
2516 from SDO/HMI Vector Field Inversions
2517 http://arxiv.org/pdf/1511.06500.pdf
2519 * Flo uses GNU Parallel: https://github.com/wurmlab/flo
2521 * 使用 GNU parallel 來平行運算
2522 http://mutolisp.logdown.com/posts/316959-using-gnu-parallel-to-parallel-computing
2524 * Bug fixes and man page updates.
2529 * GNU Parallel packaged for CERN CentOS:
2530 http://linuxsoft.cern.ch/cern/centos/7/cern/x86_64/repoview/parallel.html
2532 * GNU Parallel was cited in: The Outer Solar System Origins Survey:
2533 I. Design and First-Quarter Discoveries
2534 http://arxiv.org/pdf/1511.02895.pdf
2536 * GNU Parallel was cited in: Contrasting genetic architectures of
2537 schizophrenia and other complex diseases using fast
2538 variance-components analysis
2539 http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.3431.html
2541 * GNU Parallel was cited in: Named-Entity Chunking for Norwegian Text
2542 using Support Vector Machines
2543 http://ojs.bibsys.no/index.php/NIK/article/viewFile/248/211
2545 * GNU Parallel was cited in: Multiscale Estimation of Binding Kinetics
2546 Using Brownian Dynamics, Molecular Dynamics and Milestoning
2547 http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004381#pcbi.1004381.ref072
2549 * GNU Parallel was cited in: A Detailed Characterization of Errors in
2550 Logic Circuits due to Single-Event Transients
2551 http://ieeexplore.ieee.org/xpl/articleDetails.jsp?tp=&arnumber=7302348&url=http%3A%2F%2Fieeexplore.ieee.org%2Fxpls%2Fabs_all.jsp%3Farnumber%3D7302348
2553 * GNU Parallel was cited in: Arabic Speaker Emotion Classification
2554 Using Rhythm Metrics and Neural Networks
2555 http://www.eurasip.org/Proceedings/Eusipco/Eusipco2015/papers/1570104855.pdf
2557 * GNU Parallel was cited in: Stride Search: a general algorithm for
2558 storm detection in high resolution climate data
2559 http://www.geosci-model-dev-discuss.net/8/7727/2015/gmdd-8-7727-2015.pdf
2561 * GNU Parallel was cited in: Decomposing Digital Paintings into Layers
2562 via RGB-space Geometry http://arxiv.org/pdf/1509.03335.pdf
2564 * GNU Parallel was cited in: Structure and evolutionary history of a
2565 large family of NLR proteins in the zebrafish
2566 http://www.biorxiv.org/content/biorxiv/early/2015/09/18/027151.full.pdf
2568 * GNU Parallel was cited in: Evolution of movement strategies under
2569 competitive interactions
2570 http://digital.csic.es/bitstream/10261/115973/1/evolution_movement_strategies_Kiziridis.pdf
2572 * Automating large numbers of tasks
2573 https://rcc.uchicago.edu/docs/tutorials/kicp-tutorials/running-jobs.html
2575 * Max out your IOPs with GNU Parallel
2576 http://blog.bitratchet.com/2015/11/11/max-out-your-iops-with-gnu-parallel/
2578 * Bug fixes and man page updates.
2583 * --plus makes it possible to use {##} as a shorthand for
2584 {= $_=$Global::JobQueue->total_jobs() =} which gives the the number
2585 of jobs to run in total.
2587 * {= $_=$Global::JobQueue->total_jobs() =} is incompatible with -X,
2590 * GNU Parallel is now mostly compatible with lsh
2591 (http://www.lysator.liu.se/~nisse/lsh/) and somewhat compatible with
2592 autossh (http://www.harding.motd.ca/autossh/).
2594 * --workdir ... now also works when run locally.
2596 * GNU Parallel was cited in: There is no (75, 32, 10, 16) strongly
2597 regular graph http://arxiv.org/pdf/1509.05933.pdf
2599 * GNU Parallel was cited in: Roary: rapid large-scale prokaryote pan
2601 http://bioinformatics.oxfordjournals.org/content/early/2015/08/05/bioinformatics.btv421.full.pdf+html
2603 * GNU Parallel is used in TraitAR:
2604 https://testpypi.python.org/pypi/traitar/0.1.4
2606 * A parallel and fast way to download multiple files
2607 http://onetipperday.blogspot.com/2015/10/a-parallel-and-fast-way-to-download.html
2609 * Usar GNU Parallel para aumentar el rendimiento de tus scripts
2610 http://adrianarroyocalle.github.io/blog/2015/10/20/usar-gnu-parallel/
2612 * Bug fixes and man page updates.
2617 * GNU Parallel was cited in: Flexible Modeling of Epidemics with an
2618 Empirical Bayes Framework
2619 http://journals.plos.org/ploscompbiol/article?id=10.1371%2Fjournal.pcbi.1004382
2621 * GNU Parallel was cited in: BL1: 2D Potts Model with a Twist
2622 https://sucs.swan.ac.uk/~rjames93/Dissertation.pdf
2624 * GNU Parallel was cited in: A Scalable Parallel Implementation of
2625 Evolutionary Algorithms for Multi-Objective Optimization on GPUs
2626 http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=7257074
2628 * GNU Parallel was cited in: How Can We Measure the Similarity Between
2629 Résumés of Selected Candidates for a Job?
2630 https://www.researchgate.net/publication/275954089_How_can_we_measure_the_similarity_between_rsums_of_selected_candidates_for_a_job
2632 * GNU Parallel was cited in: Interplay of cell dynamics and epithelial
2633 tension during morphogenesis of the Drosophila pupal wing
2634 http://www.researchgate.net/profile/Raphael_Etournay/publication/279061859_Interplay_of_cell_dynamics_and_epithelial_tension_during_morphogenesis_of_the_Drosophila_pupal_wing/links/558a95ad08aeae8413bcceea.pdf
2636 * Third-party selling GNU Parallel T-shirts
2637 http://www.aliexpress.com/item/2015F-BSO-GNU-LOGO-GNU-PARALLEL-men-s-shirt-sleeve-visual-illusion-error/32464827966.html
2639 * Joys of gnu parallel
2640 http://scottolesen.com/index.php/2015/08/26/joys-of-gnu-parallel/
2642 * Crop and resize images with bash and ImageMagick
2643 https://www.simonholywell.com/post/2015/08/image-resize-crop-bash-imagemagick/
2645 * Three Ways to Script Processes in Parallel
2646 http://www.codeword.xyz/2015/09/02/three-ways-to-script-processes-in-parallel/
2648 * What It Looks Like to Process 3.5 Million Books
2649 http://blog.gdeltproject.org/what-it-looks-like-to-process-3-5-million-books/
2651 * Bug fixes and man page updates.
2656 * If $job->skip() is called in {= =} the job will not be run.
2658 * @arg can now be used in {= =}: parallel echo '{= $arg[2] < 5 and
2659 $_="j" =}' ::: 1 2 3 ::: 4 5 6
2661 * Version of GNU Parallel that uses PostgreSQL as backend
2662 https://github.com/stephen-fralich/parallel-sql/
2664 * SpeedSeq: ultra-fast personal genome analysis and interpretation
2665 http://www.nature.com/nmeth/journal/vaop/ncurrent/full/nmeth.3505.html
2667 * GNU Parallel is used in elPrep: https://github.com/ExaScience/elprep
2669 * Who actually reads the code?
2670 http://www.fsf.org/blogs/community/who-actually-reads-the-code
2672 * Introduction to GNU Parallel
2673 http://erictleung.com/2015/08/06/intro-to-gnu-parallel/
2675 * ¿Alguien se lee el código?
2676 http://www.taringa.net/post/linux/18854759/Alguien-se-lee-el-codigo.html
2678 * ¿Quién se lee el código fuente?
2679 https://victorhckinthefreeworld.wordpress.com/2015/08/12/quien-se-lee-el-codigo-fuente/
2681 * Distribution des traitements avec GNU Parallel
2682 http://blog.inovia-conseil.fr/?p=226#4
2684 * Эксперимент по проверке, читают ли код открытых проектов
2685 http://www.opennet.ru/opennews/art.shtml?num=42718
2687 * 多核心主機搭配 GNU parallel
2688 http://blog.zeroplex.tw/2015/08/gnu-parallel.html
2690 * Bug fixes and man page updates.
2695 * If a record fits in a block, --block only reads upto the size of
2696 --block. If not: --block reads a full --block more.
2698 * Due to widely spread distributions still using --tollef even after a
2699 year of being retired following a year of being obsolete, --tollef
2700 now gives an error unless used with --gnu.
2702 * --nice now uses a perl wrapper instead of the nice command.
2704 * Cookie 2013-08-18 was won by Mark Maimone, 1 year and 11 months
2707 * A parser for GNU Parallel --joblog files:
2708 https://github.com/harryjubb/joblog
2710 * GNU Parallel was cited in: Dynamical formation & scattering of
2711 hierarchical triples: Cross sections, Kozai-Lidov oscillations, and
2712 collisions http://arxiv.org/pdf/1507.03593.pdf
2714 * GNU Parallel was cited in: A Fast Compiler for NetKAT
2715 http://arxiv.org/pdf/1506.06378.pdf
2717 * GNU Parallel was cited in: Decomposing Time-Lapse Paintings into
2719 http://cs.gmu.edu/~ygingold/timemap/Decomposing%20Time-Lapse%20Paintings%20into%20Layers%20(Tan%20et%20al%202015%20SIGGRAPH)%20600dpi.pdf
2721 * GNU Parallel was used in: Somatic mutation calling from the matched
2722 tumor-normal exome-sequencing
2723 http://fafner.meb.ki.se/biostatwiki/somac/
2725 * Parallel Processing from the Command Line
2726 https://www.perpetual-beta.org/weblog/parallel-processing-from-the-command-line.html
2728 * Using GNU Parallel to speed up network operations
2729 http://vielmetti.typepad.com/vacuum/2015/06/using-gnu-parallel-to-speed-up-network-operations.html
2731 * Crawl faster with "parallel" - but how fast?
2732 http://andreas-wpv.blogspot.com/2015/07/crawl-faster-with-parallel-but-how-fast.html
2734 * Simultaneously benchmark many URLs with ApacheBench and GNU parallel
2735 https://www.simonholywell.com/post/2015/06/parallel-benchmark-many-urls-with-apachebench/
2737 * Bug fixes and man page updates.
2742 * --halt has been rewritten completely. You can now combine
2743 percentages with success or fail. See the man page.
2745 * Exit values 102..254 have been removed. 101 means more than 100 jobs
2748 * Killing through --timeout, --memfree, or --halt is now done as a
2751 * --termseq determines which signals are sent when a job is killed.
2753 * An empty argument would previously cause no string to be
2754 inserted. This is now changed to '' being inserted, thus prepending
2755 a space to the output of: parallel echo {} b ::: ''
2757 * $PARALLEL_ENV can now be set to an environment prepending the
2758 command. Used in env_parallel as mentioned in the manpage.
2760 * --retry-failed will retry all failed jobs in a joblog. It will
2761 ignore any command given.
2763 * --ssh and $PARALLEL_SSH can be used to set the command used for
2764 ssh. The command is assumed to behave the same way as ssh.
2766 * --fifo now works in csh, too.
2768 * Q(...) can be used in {= =} to shell quote a string.
2770 * GNU Parallel was cited in: DockBench: An Integrated Informatic
2771 Platform Bridging the Gap between the Robust Validation of Docking
2772 Protocols and Virtual Screening Simulations
2773 http://www.mdpi.com/1420-3049/20/6/9977
2775 * GNU Parallel was cited in: Swedes Online: You Are More Tracked Than
2777 http://www.diva-portal.org/smash/get/diva2:807623/FULLTEXT01.pdf
2779 * GNU Parallel was cited in: Tutorial: Lorenz-Mie theory for 2D
2780 scattering and resonance calculations
2781 http://arxiv.org/pdf/1505.07691.pdf
2783 * GNU Parallel was cited in: A quantitative assessment of the Hadoop
2784 framework for analyzing massively parallel DNA sequencing data
2785 http://link.springer.com/article/10.1186/s13742-015-0058-5
2787 * GNU Parallel was cited in: A composite genome approach to identify
2788 phylogenetically informative data from next-generation sequencing
2789 http://www.biomedcentral.com/content/pdf/s12859-015-0632-y.pdf
2791 * GNU Parallel is used in: taxator-tk
2792 http://algbio.cs.uni-duesseldorf.de/webapps/wa-download/
2794 * GNU Parallel is used in: https://github.com/d2207197/local-mapreduce
2796 * GNU Parallel is used in: wiki-edit-news https://github.com/albert-decatur/wiki-edit-news
2798 * GNU Parallel is used in: A Fingerprint Identification System
2799 https://curve.carleton.ca/system/files/theses/28733.pdf
2801 * Job ad asking for GNU Parallel experience:
2802 http://searchjobs.intel.com/gdansk-pol/software-validation-engineer/63A06826DAF24797AB414DC146201C2E/job/
2804 * Using BLAT http://wangzhengyuan.blogspot.dk/2015/06/using-blat.html
2806 * Bug fixes and man page updates.
2811 * Security: The security issue for --sshlogin + --fifo/--cat has been
2812 fixed. Thereby all issues with
2813 http://lists.gnu.org/archive/html/parallel/2015-04/msg00045.html
2816 * Security: After further security analysis the issue fixed in
2817 20150422 also fixed the problem for --tmux.
2819 * GNU Parallel was cited in: CIDER: a pipeline for detecting waves of
2820 coordinated transcriptional regulation in gene expression
2822 http://biorxiv.org/content/biorxiv/early/2015/03/17/012518.full.pdf
2824 * GNU Parallel was cited in: Building Genomic Analysis Pipelines in a
2825 Hackathon Setting with Bioinformatician Teams: DNA-seq, Epigenomics,
2826 Metagenomics and RNA-seq
2827 http://biorxiv.org/content/biorxiv/early/2015/05/05/018085.full.pdf
2829 * GNU Parallel was cited in: Sequencing the cap-snatching repertoire
2830 of H1N1 influenza provides insight into the mechanism of viral
2831 transcription initiation
2832 http://nar.oxfordjournals.org/content/early/2015/04/20/nar.gkv333.full.pdf
2834 * GNU Parallel was cited in: Genome assembly using Nanopore-guided
2835 long and error-free DNA reads
2836 http://www.biomedcentral.com/content/pdf/s12864-015-1519-z.pdf
2838 * GNU Parallel was used (unfortunately with wrong citation) in:
2839 Comparing the CarbonTracker and TM5-4DVar data assimilation systems
2840 for CO2 surface flux inversions
2841 http://www.atmos-chem-phys-discuss.net/15/8883/2015/acpd-15-8883-2015-discussion.html
2843 * GNU Parallel was used in: Gene Set Omic Analysis (GSOA) method
2844 https://bitbucket.org/srp33/gsoa
2846 * A Quick and Neat :) Orchestrator using GNU Parallel
2847 http://www.elsotanillo.net/2015/05/a-quick-and-neat-orchestrator-using-gnu-parallel/
2849 * Execute commands on multiple computers using GNU Parallel (setting
2850 up a cluster on the cheap)
2851 https://spectraldifferences.wordpress.com/2015/04/26/execute-commands-on-multiple-computers-using-gnu-parallel-setting-up-a-cluster-on-the-cheap/
2853 * Functions and GNU parallel for effective cluster load management
2854 http://genomespot.blogspot.dk/2015/04/functions-and-gnu-parallel-for.html
2856 * Use parallel processing to save time importing databases
2857 http://drupalsun.com/node/41854
2859 * Run multiple ssh commands in parallel with GNU Parallel
2860 http://www.ameir.net/blog/archives/380-run-multiple-ssh-commands-in-parallel-with-gnu-parallel.html
2862 * Importing huge databases faster
2863 https://www.lullabot.com/blog/article/importing-huge-databases-faster
2865 * Parallel? Gnu parallel! https://debian.pro/1834
2867 * Bug fixes and man page updates.
2872 New in this release:
2874 * Security fix. An attacker on the local system could make you
2875 overwrite one of your own files with a single byte. The problem
2876 exist when you use --compress or --tmux or --pipe or --cat or
2877 --fifo. The attacker must figure out the randomly chosen file name
2878 and create a symlink within a time window of 15 ms.
2880 * --shuf will generate all jobs, and shuffle them before running
2881 them. This is useful to get a quick preview of the results before
2882 running the full batch.
2884 * GNU Parallel now has a DOI: https://dx.doi.org/10.5281/zenodo.16303
2886 * GNU Parallel was cited in: Scaling Machine Learning for Target
2887 Prediction in Drug Discovery using Apache Spark
2888 https://cris.cumulus.vub.ac.be/portal/files/5147244/spark.pdf
2890 * GNU Parallel was cited in: Bayesian inference of protein structure
2891 from chemical shift data https://peerj.com/articles/861/
2893 * GNU Parallel was cited in: Toward Enhanced Metadata Quality of
2894 Large-Scale Digital Libraries: Estimating Volume Time Range
2895 https://www.ideals.illinois.edu/bitstream/handle/2142/73656/186_ready.pdf
2897 * GNU Parallel was cited in: Experimental study on the Wind Farm
2898 Substation Cable Installation Problem
2899 http://i11www.iti.uni-karlsruhe.de/_media/teaching/theses/ma-schmitz-14.pdf
2901 * GNU Parallel was used in: https://github.com/KAPPS-/landsat-gifworks
2903 * GNU Parallel was used in: https://github.com/exascience/elprep
2905 * GNU Parallel was used in:
2906 http://search.cpan.org/~jillrowe/HPC-Runner-GnuParallel-0.01/
2908 * GNU Parallel was used in:
2909 http://search.cpan.org/~ajpage/Bio-Roary-2.0.7/lib/Bio/Roary/JobRunner/Parallel.pm
2911 * GNU Parallel was used in: Rapid haploid SNP calling
2912 https://github.com/tseemann/snippy
2914 * Pictures and Metadata
2915 http://www.ozzy.no/2015/02/05/pictures-and-metadata/
2917 * Task automation with bash and parallel
2918 https://biowize.wordpress.com/2015/03/23/task-automation-with-bash-and-parallel/
2920 * How To: Speed Up File Transfers in Linux using RSync with GNU
2922 http://www.yourownlinux.com/2015/04/speed-up-file-transfers-using-rsync-with-gnu-parallel.html
2924 * Mirroring a Git Repository
2925 https://avacariu.me/articles/mirroring-a-git-repository.html
2927 * Add an ENVI header to JAXA Global Mangrove Watch PALSAR tiles
2928 https://spectraldifferences.wordpress.com/2015/03/24/add-an-envi-header-to-jaxa-global-mangrove-watch-palsar-tiles/
2931 http://www.zhihu.com/question/29257300
2933 * Bug fixes and man page updates.
2938 New in this release:
2940 * --number-of-cores respects 'taskset' on GNU/Linux.
2942 * --joblog --pipe gives the data send and received in the log.
2944 * GNU Parallel was tested to support 100 GB sized records in --pipe. A
2945 few bugs was fixed to support >2 GB records. It works, but is rather
2948 * GNU Parallel was cited in: RIG: Recalibration and Interrelation of
2949 genomic sequence data with the GATK
2950 http://www.g3journal.org/content/early/2015/02/13/g3.115.017012.full.pdf+html
2952 * GNU Parallel was cited in: MPI-blastn and NCBI-TaxCollector:
2953 Improving metagenomic analysis with high performance classification
2954 and wide taxonomic attachment
2955 http://www.worldscientific.com/doi/abs/10.1142/S0219720014500139?af=R&
2957 * GNU Parallel was cited in: Recent evolution in Rattus norvegicus is
2958 shaped by declining effective population size
2959 http://biorxiv.org/content/biorxiv/early/2015/03/01/015818.full.pdf
2961 * GNU Parallel was cited in: Evidence for DCO+ as a probe of
2962 ionization in the warm disk surface
2963 http://arxiv.org/pdf/1503.02659.pdf
2965 * GNU Parallel was cited in: De novo assembly and annotation of the
2966 Asian tiger mosquito (Aedes albopictus) repeatome with dnaPipeTE
2967 from raw genomic reads and comparative analysis with the yellow
2968 fever mosquito (Aedes aegypti)
2969 http://gbe.oxfordjournals.org/content/early/2015/03/11/gbe.evv050.full.pdf
2971 * GNU Parallel was cited in: A General Approach to Network
2972 Configuration Analysis
2973 http://research.microsoft.com/en-us/um/people/ratul/papers/nsdi2015-batfish.pdf
2975 * GNU Parallel was cited in: Scrimer: designing primers from
2977 http://onlinelibrary.wiley.com/doi/10.1111/1755-0998.12403/pdf
2979 * GNU Parallel was cited in: Efficient Retrieval of Key Material for
2980 Inspecting Potentially Malicious Traffic in the Cloud
2981 http://sacko.uk/pdf/2015.1.pdf
2983 * GNU Parallel will be presented at Strataconf: Poor Man's Parallel
2985 http://strataconf.com/big-data-conference-uk-2015/public/schedule/detail/40031
2987 * GNU Parallel was used in:
2988 https://github.com/alexbyrnes/FCC-Political-Ads_The-Code
2990 * GNU Parallel was used in: https://github.com/martymac/fpart
2992 * GNU Parallel was used in:
2993 https://github.com/hoytak/diabetic-retinopathy-code
2995 * GNU Parallel was used in:
2996 https://github.com/mehmattski/HybSeqPipeline
2998 * GNU Parallel was used in:
2999 http://search.cpan.org/~ajpage/Bio-Roary-2.0.0/lib/Bio/Roary/JobRunner/Parallel.pm
3001 * Using GNU Parallel on a Raspberry Pi cluster:
3002 http://www.dcglug.org.uk/cluster-progress/
3004 * An introduction to vector tiling and map reduce in postgis:
3005 http://dimensionaledge.com/intro-vector-tiling-map-reduce-postgis/
3007 * Running scripts in parallel with GNU Parallel:
3008 http://code.jasonbhill.com/2015/03/
3010 * Mahout: Parallelising the creation of DecisionTrees:
3011 http://www.markhneedham.com/blog/2012/12/27/mahout-parallelising-the-creation-of-decisiontrees/
3013 * High-Performance Scientific Computing: Running serial jobs in
3015 https://support.scinet.utoronto.ca/education/staticpublic/course178/serial.pdf
3017 * Parallel cardinality on your laptop
3018 https://highonscience.wordpress.com/2015/03/15/parallel-cardinality-on-your-laptop/
3020 * Experiments about a better locate using grep
3021 http://a3nm.net/blog/better_locate.html
3023 * Homework with GNU Parallel:
3024 https://support.scinet.utoronto.ca/education/staticpublic/course178content349.html
3026 * Parallel - Jobs in Skripten parallelisieren:
3027 https://slzm.de/blog/linux-tool-des-tages-parallel-jobs-in-skripten-parallelisieren/#more-612
3029 * GNU Parallel, czyli 100% użycia procesora
3030 http://matmatyk.blogspot.dk/2015/03/gnu-parallel-czyli-100-uzycia-procesora.html
3032 * Bug fixes and man page updates.
3037 * --tmux has gotten a major overhaul.
3039 * GNU Parallel was cited in: RaftLib: A C++ Template Library for High
3040 Performance Stream Parallel Processing
3041 http://www.cs.wustl.edu/~lip/pubs/pmam15_jbeard.pdf
3043 * GNU Parallel was cited in: Quantifying properties of hot and dense
3044 QCD matter through systematic model-to-data comparison
3045 http://arxiv.org/pdf/1502.00339.pdf
3047 * GNU Parallel was cited in: Towards Collaborative Exploration and
3048 Analysis of Big Data from Mars: A Noachis Terra Case Study
3049 http://link.springer.com/chapter/10.1007/978-3-319-13865-7_25
3051 * GNU Parallel was used (unfortunately with wrong citation) in:
3052 Performance and Scaling Comparison Study of RDBMS and NoSQL
3054 http://ijact.in/wp-content/uploads/2014/11/COMPUSOFT-311-1270-1275.pdf
3056 * GNU Parallel was used (unfortunately without citation) in: Parallel
3057 Implementation of Big Data Pre-Processing Algorithms for Sentiment
3058 Analysis of Social Networking Data
3059 http://www.researchmathsci.org/IJFMAart/ijfma-v6n2-7.pdf
3061 * GNU Parallel was used (unfortunately without citation) in: SpeedSeq:
3062 Ultra-fast personal genome analysis and interpretation
3063 http://biorxiv.org/content/biorxiv/early/2014/12/05/012179.full.pdf
3065 * Zip Folders with GNU Parallel
3066 http://fazky.github.io/posts/Linux/2015-01-07-GNU-Parallel.html
3068 * Using GNU Parallel with Freesurfer
3069 http://programminginadarkroom.blogspot.dk/2015/02/using-gnu-parallel-with-freesurfer.html
3071 * GNU Parallel is used in Velociraptor: https://github.com/ericwhyne/Velociraptor
3073 * Marcus Beach GNU Parallel http://marcusbeach.co/gnu-parallel/
3075 * Bug fixes and man page updates.
3080 * Remote jobs now send stderr (standard error) to stderr (standard
3081 error) instead of stdout (standard output).
3083 * Remote execution command is now packed using base64 encoded
3084 bzip2. This means that big environments (app. 100 KB) can be
3085 transferred. This change makes remote execution alpha quality.
3087 * --semaphoretimeout now takes a negative value. This means give up if
3088 the semaphore is not gotten within the timeout.
3090 * --halt -1 and -2 now means halt if a job succeeds (so the opposite
3093 * --no-keep-order will reverse --keep-order.
3095 * Bash's second fix of shellshock caused --env to break again when
3096 exporting functions. This has been fixed again.
3098 * A semibig refactoring of big functions. All non-trivial functions
3099 are now less than 100 lines. The refactoring makes this release beta
3102 * A description of the design decisions for GNU Parallel can be found
3103 in 'man parallel_design'.
3105 * A bug fix in replacement strings caused rewrite of the replacement
3106 function. This makes use of replacement strings alpha quality.
3108 * GNU Parallel was cited in: Improving Energy and Performance with
3109 Spintronics Caches in Multicore Systems
3110 http://link.springer.com/chapter/10.1007/978-3-319-14313-2_24
3112 * GNU Parallel was cited in: Parallel post-processing with MPI-Bash
3113 http://dl.acm.org/citation.cfm?id=2691137
3115 * GNU Parallel was cited in: Distinguishing cause from effect using
3116 observational data: methods and benchmarks
3117 http://arxiv-web3.library.cornell.edu/pdf/1412.3773.pdf
3119 * GNU Parallel was cited in: Data Science at the Command Line
3120 http://cdn.oreillystatic.com/oreilly/booksamplers/9781491947852_sampler.pdf
3122 * GNU Parallel was cited in: Resolution of Genetic Map Expansion
3123 Caused by Excess Heterozygosity in Plant Recombinant Inbred
3124 Populations http://www.g3journal.org/content/4/10/1963.full.pdf
3126 * GNU Parallel was cited in: Bayesian Inference of Protein Structure
3127 from Chemical Shift Data https://peerj.com/preprints/692v1.pdf
3129 * GNU Parallel was cited in: Clonal interference and Mullerʼs ratchet
3130 in spatial habitats http://iopscience.iop.org/1478-3975/11/5/056003
3132 * GNU Parallel was cited in: Computação Verde na Camada de Aplicação
3133 https://linux.ime.usp.br/~tpaiva/mac0499/files/monografia.pdf
3135 * GNU Parallel was cited in: Frameshift alignment: statistics and
3136 post-genomic applications
3137 http://bioinformatics.oxfordjournals.org/content/30/24/3575.full.pdf+html
3139 * GNU Parallel was cited in: Towards Recommender Engineering Tools and
3140 Experiments for Identifying Recommender Differences
3141 http://elehack.net/research/thesis/mde-thesis.pdf
3143 * GNU Parallel was cited in: Speaker Environment Classification Using
3144 Rhythm Metrics in Levantine Arabic Dialect
3145 http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=6923918
3147 * GNU Parallel was cited in: A Formal Proof Of The Kepler Conjecture
3148 http://arxiv.org/pdf/1501.02155.pdf
3150 * GNU Parallel was cited in: Allocation Policy Analysis for Cache
3151 Coherence Protocols for STT-MRAM-based caches
3152 http://conservancy.umn.edu/bitstream/handle/11299/169362/Nandkar_umn_0130M_15551.pdf
3154 * GNU Parallel was cited in: Using Trusted Platform Module for
3155 securing virtual environment access in Cloud
3156 http://dar.aucegypt.edu:8080/bitstream/handle/10526/4237/Using%20Trusted%20Platform%20Module%20for%20Securing%20Virtual%20Environment%20Access%20in%20Cloud.pdf
3158 * GNU Parallel was cited in: Weakly Supervised Learning for
3159 Compositional Sentiment Recognition
3160 http://computerlinguist.org/static/downloads/ma-thesis/Master_Thesis-Michael_Haas-Weakly_Supervised_Learning_for_Compositional_Sentiment_Recognition.pdf
3162 * GNU Parallel was cited in: Agility and Performance in Elastic
3163 Distributed Storage http://dl.acm.org/citation.cfm?id=2668129
3165 * GNU Parallel was used (unfortunately without citation) in: Large
3166 Scale Author Name Disambiguation in Digital Libraries
3167 http://semanticommunity.info/@api/deki/files/31523/P227_3546.pdf
3169 * GNU Parallel is used in BEDOPS:
3170 https://media.readthedocs.org/pdf/bedops/v2p5p0/bedops.pdf
3172 * Job ad asking for GNU Parallel skills:
3173 http://www.aplitrak.com/?adid=dXMzMTYxMjQuMzg0MTkuMTU1MEBtYW5wb3dlcmZveG5hLmFwbGl0cmFrLmNvbQ#sthash.kYCIhhty.KcoT6HnJ.dpbs
3175 * GNU Parallel: Open Source For You (OSFY) magazine, October 2013
3177 http://www.shakthimaan.com/posts/2014/11/27/gnu-parallel/news.html
3179 * Multithreaded Encryption and Compression
3180 http://www.krazyworks.com/multithreaded-encryption-and-compression/
3182 * GNU Parallel on OSX and Linux
3183 https://darknightelf.wordpress.com/2015/01/01/gnu-parallel-on-osx/
3185 * How to build gnu parallel from source on Ubuntu PC?
3186 http://blog.ovidiuparvu.com/build-gnu-parallel-source-ubuntu-pc/
3188 * GNU parallel for openaddr-process-one
3189 https://nelsonslog.wordpress.com/2015/01/09/gnu-parallel-for-openaddr-process-one/
3191 * From SRA Project to FastQ http://danielecook.com/sra-project-fastq/
3193 * Software Development Tooling
3194 http://www.computer.org/csdl/mags/so/2014/06/mso2014060021.pdf
3196 * コマンドを並列に実行するGNU parallelがとても便利
3197 http://bicycle1885.hatenablog.com/entry/2014/08/10/143612
3199 * Bug fixes and man page updates.
3204 * Remote systems can be divided into hostgroups (e.g. web and db) by
3205 prepending '@groupname/' to the sshlogin. Multiple groups can be
3206 given by separating groups with '+'. E.g. @web/www1 @web+db/www2
3209 * Remote execution can be restricted to servers that are part of one
3210 or more groups by '@groupname' as an sshlogin. Multiple groups can
3211 be given by separating groups with '+'. E.g. -S @web or -S @db+web
3213 * With --hostgroup you can restrict arguments to certain hostgroups by
3214 appending '@groupname' to the argument. Multiple groups can be
3215 given by separating groups with '+'. E.g. my_web_arg@web
3216 db-or-web-arg@db+web db-only-arg@db Thanks to Michel Courtine for
3217 developing a prototype for this.
3219 * GNU Parallel was cited in: HTSeq-Hadoop: Extending HTSeq for
3220 Massively Parallel Sequencing Data Analysis using Hadoop
3221 http://essenceofescience.se/wp-content/uploads/2014/11/Siretskiy.pdf
3223 * GNU Parallel was cited in: SlideToolkit: An Assistive Toolset for
3224 the Histological Quantification of Whole Slide Images
3225 http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0110289
3227 * GNU Parallel was cited in: Exploring a multiprocessor design space
3228 to analyze the impact of using STT-RAM in the memory hierarchy
3229 http://conservancy.umn.edu/bitstream/handle/11299/167286/Borse_umn_0130M_15431.pdf
3231 * Command-Line OCR with Tesseract on Mac OS X
3232 https://ryanfb.github.io/etc/2014/11/13/command_line_ocr_on_mac_os_x.html
3234 * Bug fixes and man page updates.
3239 * --env was changed to deal with Bash's new way of exporting a function.
3241 * GNU Parallel was cited in: Exclusion of cosmic rays in
3242 protoplanetary disks. II. Chemical gradients and observational
3243 signatures http://iopscience.iop.org/0004-637X/794/2/123/article
3245 * GNU Parallel was cited in: Application of Machine Learning to
3246 Algorithm Selection for TSP
3247 http://www.dbai.tuwien.ac.at/staff/musliu/art_ictai_cam.pdf
3249 * GNU Parallel was cited in: Performance Models for LTE-Advanced
3251 http://repository.asu.edu/attachments/137242/content/Tyagi_asu_0010E_14116.pdf
3253 * GNU Parallel was used (unfortunately without citation) in: De Novo
3254 Insertions and Deletions of Predominantly Paternal Origin Are
3255 Associated with Autism Spectrum Disorder
3256 http://www.cell.com/cms/attachment/2019079667/2039310868/mmc1.pdf
3258 * GNU Parallel was determined 'popular' by Statistical Analysis of
3259 Popular Open Source Software Projects and Their Communities
3260 http://andiwre.itmaranatha.org/prosiding/ICITEE2014/PaperAndiWRE-ICITEE2014.pdf
3262 * GNU Parallel is demonstrated in: Data Science at the Command Line:
3263 Facing the Future with Time-Tested Tools
3265 * GNU Parallel was covered in a talk at Sydney Perl Mongers group
3266 http://www.openfusion.net/talks/pwp/#24
3268 * GNU Parallel and how to get started with it
3269 http://www.jduck.net/blog/2014/09/30/gnu-paralell/
3271 * Behat/Selenium/Parallel
3272 http://jaffamonkey.com/behat-selenium-parallel/
3274 * Comparing Golang, Scala, Elixir and Ruby for ETL
3275 http://www.dimroc.com/2014/09/29/etl-language-showdown/
3277 * Assemble a list of which of these hosts are up or down
3278 http://opsfun.wordpress.com/2014/03/31/gnu-parallel/
3280 * Running commands on many nodes simultaneously
3281 http://opsfun.wordpress.com/2014/03/31/19/
3283 * Ubuntu 13.04でGNU ParallelをGNUモードで動かす
3284 http://qiita.com/YusukeSuzuki@github/items/7b96b5876bf980f21e85
3286 * Bug fixes and man page updates.
3291 * If the file given as --sshloginfile is changed it will be re-read
3292 when a job finishes though at most once per second. This makes it
3293 possible to add and remove hosts while running.
3295 * Brutha uses GNU Parallel https://pypi.python.org/pypi/brutha/1.0.2
3297 * OCRmyPDF uses GNU Parallel https://github.com/fritz-hh/OCRmyPDF/
3299 * GNU Parallel was presented at Balti and Bioinformatics "On-Air"
3300 http://youtu.be/UtXlr19xTh8?t=2h5m0s
3302 * Pleiades Plus uses GNU Parallel
3303 https://github.com/ryanfb/pleiades-plus
3305 * Imagemagick and GNU Parallel
3306 http://deepdish.io/2014/09/15/gnu-parallel/
3308 * GNU Parallel (Sebuah Uji Coba)
3309 http://pr4ka5a.wordpress.com/2014/09/04/gnu-parallel-sebuah-uji-coba/
3311 * GNU Parallel: 并行执行Linux命令
3312 http://blog.csdn.net/xzz_hust/article/details/39183837
3317 * GNU Parallel now uses the same shell it was started from as the
3318 command shell for local jobs. So if GNU Parallel is started from
3319 tcsh it will use tcsh as its shell even if the login $SHELL is
3320 different. For remote jobs the login $SHELL will be used.
3322 * The whole current environment in bash can be copied by using a shell
3323 wrapper function (Search manual for env_parallel).
3325 * --plus adds the replacement strings {+/} {+.} {+..} {+...} {..}
3326 {...} {/..} {/...}. The idea being that '+foo' matches the opposite
3327 of 'foo' and {} = {+/}/{/} = {.}.{+.} = {+/}/{/.}.{+.} = {..}.{+..}
3328 = {+/}/{/..}.{+..} = {...}.{+...} = {+/}/{/...}.{+...}
3330 * GNU Parallel now deals correctly with the combination
3331 rsync-3.1.X-client and rsync-2.5.7-server
3333 * GNU Parallel was cited in: A Web Service for Scholarly Big Data
3334 Information Extraction
3335 http://patshih.ist.psu.edu/publications/Williams-CiteSeerExtractor-ICWS14.pdf
3337 * Comparison of the speed of different GNU Parallel versions:
3338 http://lists.gnu.org/archive/html/parallel/2014-08/msg00030.html
3340 * GNU Parallel was covered in the webcast 2014-08-20: Data Science at
3341 the Command Line http://www.oreilly.com/pub/e/3115
3343 * Distributed processing with GNU parallel
3344 http://kazjote.eu/2014/08/11/distributed-processing-with-gnu-parallel
3346 * A Peek into GNU Parallel
3347 http://blog.dataweave.in/post/94238943763/a-peek-into-gnu-parallel
3349 * Сборка GNU parallel для CentOS/RHEL
3350 http://www.stableit.ru/2014/07/gnu-parallel-centosrhel.html
3352 * Bug fixes and man page updates.
3357 * {= perl expression =} can be used as replacement string. The
3358 expression should modify $_. E.g. {= s/\.gz$// =} to remove .gz from
3359 the string. This makes replacement strings extremely flexible.
3361 * Positional perl expressions (similar to {2}) are given as {=2 perl
3362 expression=} where 2 is the position.
3364 * One small backwards incompatibility: {1}_{2} will replace {2} with
3365 the empty string if there is only one argument. Previously {2} would
3366 have been left untouched.
3368 * Replacement strings can be defined using --rpl. E.g. parallel --rpl
3369 '{.gz} s/\.gz$//' echo {.gz} ::: *.gz
3371 * The parenthesis around {= perl expression =} can be changed with
3374 * --tmux will direct the output to a tmux session instead of
3375 files. Each running jobs will be in its own window.
3377 * --halt 10% will stop spawning new jobs if 10% failed so far.
3379 * GNU Parallel was cited in: bammds: A tool for assessing the ancestry
3380 of low depth whole genome data using multidimensional scaling (MDS)
3381 http://bioinformatics.oxfordjournals.org/content/early/2014/06/28/bioinformatics.btu410.abstract
3383 * GNU Parallel was cited in: Molecular ferroelectric contributions to
3384 anomalous hysteresis in hybrid perovskite solar cells
3385 http://people.bath.ac.uk/aw558/publications/2014/arxiv_hysteresis_14.pdf
3387 * GNU Parallel was cited in: Energy Sorghum-a genetic model for the
3388 design of C4 grass bioenergy crops
3389 http://jxb.oxfordjournals.org/content/early/2014/06/20/jxb.eru229.short
3391 * GNU Parallel was cited in: Web-scale Content Reuse Detection
3392 www.isi.edu/~johnh/PAPERS/Ardi14a.pdf
3394 * Tell your friends to sign up for the Webcast at 2014-08-20 covering
3395 GNU Parallel: Data Science at the Command Line
3396 http://www.oreilly.com/pub/e/3115
3398 * GNU Parallel all the things!
3399 http://longwayaround.org.uk/notes/gnu-parallel-all-the-things/
3401 * Shell command composition and dispatch
3402 http://lukeluo.blogspot.dk/2014/07/linux-virtual-console6-shell-command.html
3404 * Parallelising plink (or anything else) the easy way
3405 http://chrisladroue.com/2012/03/parallelising-plink-or-anything-else-the-easy-way/
3407 * Easy and cheap cluster building on AWS
3408 https://grapeot.me/easy-and-cheap-cluster-building-on-aws.html
3410 * Paralelizace běžných činností v konzoli pomocí GNU Parallel
3411 http://www.abclinuxu.cz/clanky/paralelizace-beznych-cinnosti-v-konzoli-pomoci-gnu-parallel
3413 * [原] Ubuntu 下使用 parallel 命令的注意事项
3414 http://blog.ailms.me/2014/06/28/ubuntu-with-parallel.html
3416 * 简单的并行, 可使用GNU parallel
3417 http://jerkwin.github.io/2014/06/10/GNU-parallel/
3419 * Bug fixes and man page updates.
3424 * --shebang and --shebang-wrap now works on FreeBSD.
3426 * --pipepart works with --header, --regexp, --cat and --fifo.
3428 * ./configure --disable-documentation will not build documentation.
3430 * {%} works as job slot.
3432 * GNU Parallel was cited in: Energy Efficient, High-speed
3433 Communication in WSNs
3434 https://gupea.ub.gu.se/bitstream/2077/35801/1/gupea_2077_35801_1.pdf
3436 * GNU Parallel was cited in: Ferroelectric contributions to anomalous
3437 hysteresis in hybrid perovskite solar cells
3438 http://arxiv.org/pdf/1405.5810.pdf
3440 * Processes Paralleling to Speed up Computing and Tasks Execution in
3442 http://kukuruku.co/hub/nix/processes-paralleling-to-speed-up-computing-and-tasks-execution-in-linux
3444 * Moving / Copying lots of s3 files quickly using gnu parallel
3445 http://blog.aclarke.eu/moving-copying-lots-of-s3-files-quickly-using-gnu-parallel/
3447 * Speeding up grep log queries with GNU Parallel
3448 http://www.tripwire.com/state-of-security/incident-detection/speeding-grep-queries-gnu-parallel/
3450 * Ubuntu - Gnu parallel - It's awesome
3451 http://kasunweranga.blogspot.dk/2014/06/ubuntu-gnu-parallel-its-awesome.html
3453 * Export quicklooks with vector overlay using TuiView
3454 http://spectraldifferences.wordpress.com/2014/03/08/export-quicklooks-with-vector-overlay-using-tuiview/
3456 * GNU Parallel指南 http://my.oschina.net/enyo/blog/271612
3458 * GNU parallelで違和感 http://jarp.does.notwork.org/diary/201405c.html#201405301
3460 * Bug fixes and man page updates.
3465 * Use --semaphoretimeout to ignore the semaphore lock after a while.
3467 * {%} introduced as job slot replacement string. It has known bugs.
3469 * --slotreplace changes slot replacement string.
3471 * GNU Parallel officially in Solaris 11.2beta
3472 https://blogs.oracle.com/alanc/entry/solaris_11_2_changes_to
3474 * GNU Parallel was cited in: A Comparison of Antenna Placement
3475 Algorithms http://abhinavjauhri.com/publications/eap.pdf
3477 * Using GNU Parallel on a PBS cluster (nice use of --shebang-wrap)
3478 https://docs.it4i.cz/anselm-cluster-documentation/resource-allocation-and-job-execution/capacity-computing
3480 * BioLite uses GNU Parallel: https://bitbucket.org/caseywdunn/biolite
3482 * Isitdown uses GNU Parallel: http://www.isi.edu/~calvin/isitdown.md
3484 * Convert FLAC to MP3 with GNU parallel
3485 http://www.blogobramje.nl/posts/Convert_FLAC_to_MP3_with_GNU_parallel/
3487 * JD Edwards Business Function Documentation
3488 http://www.azertech.net/content/jd-edwards-business-function-documentation
3490 * Tools of the trade http://blog.eikeland.se/2014/05/01/tools-of-the-trade/
3492 * How I start a bioinformatics project
3493 http://nickloman.github.io/2014/05/14/how-i-start-a-bioinformatics-project/
3495 * No:The-Me GNU Parallel http://adityalaghate.in/gnu-parallel.html
3497 * Bug fixes and man page updates.
3502 * --pipepart is a highly efficient alternative to --pipe if the input
3503 is a real file and not a pipe.
3505 * If using --cat or --fifo with --pipe the {} in the command will be
3506 replaced with the name of a physical file and a fifo respectively
3507 containing the block from --pipe. Useful for commands that cannot
3508 read from standard input (stdin).
3510 * --controlmaster has gotten an overhaul and is no longer
3513 * --env is now copied when determining CPUs on remote system. Useful
3514 for copying $PATH if parallel is not in the normal path.
3516 * --results now chops the argument if the argument is longer than the
3517 allowed path length.
3519 * Build now survives if pod2* are not installed.
3521 * The git repository now contains tags of releases.
3523 * GNU Parallel was cited in: Proactive System for Digital Forensic
3525 http://dspace.library.uvic.ca:8080/bitstream/handle/1828/5237/Alharbi_Soltan_PhD_2014.pdf
3527 * GNU Parallel was cited in: Beyond MAP estimation with the
3528 track-oriented multiple hypothesis tracker
3529 http://ieeexplore.ieee.org/xpl/abstractReferences.jsp?tp=&arnumber=6766651&url=http%3A%2F%2Fieeexplore.ieee.org%2Fxpls%2Fabs_all.jsp%3Farnumber%3D6766651
3531 * GNU Parallel was cited in: Prokka: rapid prokaryotic genome
3533 http://bioinformatics.oxfordjournals.org/content/early/2014/03/18/bioinformatics.btu153.short
3535 * GNU Parallel was used (unfortunately with improper citation) in:
3536 Perspectives in magnetic resonance: NMR in the post-FFT era
3537 http://www.sciencedirect.com/science/article/pii/S1090780713003054
3539 * GNU Parallel is used in https://github.com/cc2qe/speedseq
3541 * Batch XML validation at the command line.
3542 http://horothesia.blogspot.dk/2014/04/batch-xml-validation-at-command-line.html
3544 * freebayes-parallel uses GNU Parallel
3545 https://github.com/ekg/freebayes/commit/31ee997984cebe8a196381c3de57e618e34a2281
3547 * Org-mode with Parallel Babel http://draketo.de/english/emacs/parallel-babel#sec-2
3549 * Speeding Up Grep Log Queries with GNU Parallel
3550 http://www.cybersecurity.io/speeding-grep-queries-gnu-parallel/
3552 * How to run tbss_2_reg in parallel
3553 http://tadpolebrainimaging.blogspot.dk/2014/03/how-to-run-tbss2reg-in-parallel.html
3555 * GNU parallel example: blastn https://asciinema.org/a/8775
3557 * Iterative DNS Brute Forcing
3558 http://www.room362.com/blog/2014/02/19/iterative-dns-brute-forcing/
3560 * Ejecutando comandos en paralelo
3561 http://jesusmercado.com/guias/ejecutando-comandos-en-paralelo/
3563 * Ejecutando en paralelo en bash (ejemplo con rsync)
3564 http://eithel-inside.blogspot.dk/2014/04/ejecutando-en-paralelo-en-bash-ejemplo.html
3566 * Bug fixes and man page updates.
3571 * Offical package for Alpine Linux now exists:
3572 http://alpinelinux.org/apk/main/x86/parallel
3574 * GNU Parallel was cited in: Estimating uncertainties in statistics
3575 computed from direct numerical simulation
3576 http://dx.doi.org/10.1063/1.4866813
3578 * GNU Parallel was cited in: Vehicle routing problems with time
3579 windows and multiple service workers: a systematic comparison
3580 between ACO and GRASP
3581 http://link.springer.com/article/10.1007/s10100-014-0341-z
3583 * GNU Parallel, quick and easy
3584 http://www.reganmian.net/blog/2014/03/09/gnu-parallel-quick-and-easy/
3586 * Using Multiple CPU Cores With Command Line Tools
3587 http://prateekvjoshi.com/2014/03/07/using-multiple-cpu-cores-with-command-line-tools/
3589 * Batch convert mp3 CBR to VBR
3590 http://blogs.zercle.com/bouroo/2013/03/batch-convert-mp3-cbr-to-vbr/
3592 * Running Behat in parallel with Selenium grid
3593 http://zalas.eu/running-behat-in-parallel-with-selenium-grid/
3595 * Git-Mirror per cronjob aktuell halten
3596 https://www.schtobia.de/2013/git-mirror-per-cronjob-aktuell-halten/
3598 * Пишем многопоточный скрипт на bash
3599 http://dafter.ru/duf/howto/130.html
3601 * 如何利用多核CPU来加速你的Linux命令
3602 http://www.chinadmd.com/file/xpcr6wpctzwtuu3ivwiaatcs_1.html
3604 * Bug fixes and man page updates.
3609 * --tollef has been retired.
3611 * --compress has be redesigned due to bugs.
3613 * Format of --eta and --joblog has changed slightly.
3615 * GNU Parallel was cited in: Speaker Verification and Keyword Spotting
3616 Systems for Forensic Applications
3617 http://lantana.tenet.res.in/website_files/thesis/Phd/srikanth.pdf
3619 * GNU Parallel was cited in: Scaleable Code Clone Detection
3620 http://scg.unibe.ch/archive/phd/schwarz-phd.pdf
3622 * GNU Parallel was cited in: Clone Detection that scales
3623 http://scg.unibe.ch/archive/masters/Vogt14a.pdf
3625 * GNU Parallel was cited in: Scalable Positional Analysis for Studying
3626 Evolution of Nodes in Networks
3627 http://arxiv-web3.library.cornell.edu/pdf/1402.3797
3629 * GNU Parallel was cited in: Aggregate Characterization of User
3630 Behavior in Twitter and Analysis of the Retweet Graph
3631 http://arxiv.org/pdf/1402.2671v1
3633 * GNU Parallel was used (unfortunately without citation) in: Causal
3634 Network Models for Predicting Compound Targets and Driving Pathways
3636 http://jbx.sagepub.com/content/early/2014/02/10/1087057114522690.full
3638 * GNU Parallel was used (unfortunately without citation) in:
3639 Performance and Energy Efficiency of Common Compression /
3640 Decompression Utilities
3641 http://www.researchgate.net/publication/243962643_Performance_and_Energy_Efficiency_of_Common_CompressionDecompression_Utilities_An_Experimental_Study_in_Mobile_and_Workstation_Computer_Platforms/file/3deec51d1dbc0474f9.pdf
3643 * GNU Parallel was used (unfortunately without citation) in: SpringFS:
3644 Bridging Agility and Performance in Elastic Distributed Storage
3645 http://www.istc-cc.cmu.edu/publications/papers/2014/SpringFS-FAST14.pdf
3647 * GNU Parallel was recommended (without citation) in: Redesigning the
3648 Specificity of Protein-DNA Interactions with Rosetta
3649 http://link.springer.com/protocol/10.1007/978-1-62703-968-0_17
3651 * GNU Parallel is co-distributed with RepeatExplorer
3652 http://www.vcru.wisc.edu/simonlab/bioinformatics/programs/repeatexplorer/README.txt
3654 * Convert MP3 to a scrolling spectrum waterfall plot video
3655 http://jdesbonnet.blogspot.dk/2014/02/convert-mp3-to-scrolling-spectrum.html
3657 * PHP wrapper class for the GNU Parallel tool
3658 https://github.com/geopal-solutions/gnu-parallel-wrapper/tree/master
3660 * Exploratory Data Analysis http://www.slideshare.net/thinrhino/gnunify
3662 * Copias de archivos con rsync y parallel
3663 http://linuxmanr4.com/2014/02/20/copias-de-archivos-con-rsync-y-parallel
3665 * Single-Thread-Programme auf Multicore-Rechnern parallelisieren
3666 http://www.adlerweb.info/blog/2014/02/08/linux-single-thread-programme-auf-multicore-rechnern-parallelisieren
3668 * Распараллеливаем процессы для ускорения вычислений и выполнения
3669 заданий в Linux http://savepearlharbor.com/?p=210480
3671 * Bug fixes and man page updates.
3676 * GNU Parallel was cited in: On the likelihood of multiple bit upsets
3678 http://arxiv-web3.library.cornell.edu/pdf/1401.1003
3680 * HaploClique uses GNU Parallel
3681 https://github.com/armintoepfer/haploclique
3683 * Scraping NSScreencast
3684 https://blog.nicolai86.eu/posts/2014-01-12/scraping-nsscreencast/
3686 * 30 Cool Open Source Software I Discovered in 2013
3687 http://www.cyberciti.biz/open-source/30-cool-best-open-source-softwares-of-2013/
3689 * [Unix] 13. The power of doing things in Parallel
3690 http://leetaey.tistory.com/384
3692 * Parallel the execution of a job that read from stdin
3693 http://www.linuxask.com/questions/parallel-the-execution-of-a-job-that-read-from-stdin
3695 * Mon Make à moi (6:38-11:50)
3696 http://videos.rennes.inria.fr/ReNaBI-GO2013/indexPierreLindenbaum.html
3698 * Shell-Abarbeitung beschleunigen: Wie Sie mit parallelen Prozesse
3699 effizienter in der Shell arbeiten
3700 https://www.hosteurope.ch/blog/shell-abarbeitung-beschleunigen-wie-sie-mit-parallelen-prozesse-effizienter-in-der-shell-arbeiten/
3702 * Summary of GNU Parallel tutorial
3703 http://hacktracking.blogspot.dk/2014/01/gnu-parallel-tutorial.html
3705 * Bug fixes and man page updates.
3710 * GNU Parallel now has a motto: For people who live life in the
3713 * Detect if the buffer dir $TMPDIR runs out of space. This changes a
3714 central piece of code, making this release alpha quality.
3716 * --keep-order --(n)onall will sort according to the sshlogin.
3718 * Detect the number of CPUs on DEC Tru64.
3720 * GNU sql: --list-tables for sqlite3.
3722 * GNU Parallel was cited in: Variational Message-Passing: Extension to
3723 Continuous Variables and Applications in Multi-Target Tracking
3724 http://www.ics.uci.edu/~ajfrank/pubs/thesis.pdf
3726 * GNU Parallel was cited in: Genome Assembly: Scaffolding Guided by
3728 https://www.duo.uio.no/handle/10852/37431
3730 * GNU Parallel was cited in: Metagenomic analysis of Mariana Trench
3732 http://repositorio.ul.pt/handle/10451/9436
3734 * GNU Parallel was cited in: Diacritization, automatic segmentation
3735 and labeling for Levantine Arabic speech
3736 http://ieeexplore.ieee.org/xpl/articleDetails.jsp?tp=&arnumber=6642556
3738 * GNU Parallel was cited in: Investigation of emotion classification
3739 using speech rhythm metrics
3740 http://ieeexplore.ieee.org/xpl/articleDetails.jsp?tp=&arnumber=6642591
3742 * GNU Parallel was cited in: A Rhythm-Based Analysis of Arabic Native
3743 and Non-Native Speaking Styles
3744 http://www.ijsps.com/uploadfile/2013/1128/20131128014413279.pdf
3746 * GNU Parallel was cited in: Evolutionary optimization of wetlands
3748 http://dl.acm.org/citation.cfm?id=2480400
3750 * GNU Parallel was cited (unfortunately with wrong citation) in:
3751 RDBMS vs NoSQL: Performance and Scaling Comparison
3752 http://www.epcc.ed.ac.uk/sites/default/files/Dissertations/2012-2013/RDBMS%20vs%20NoSQL%20-%20Performance%20and%20Scaling%20Comparison.pdf
3754 * GNU Parallel was used (without proper citation) in: Comprehensive
3755 Analysis Pipeline for Discovery of Human Genetic Variation
3756 http://www.google.com/patents/US20130311106
3758 * Encrypt and decrypt in parallel with GPG
3759 http://blog.tkassembled.com/412/encrypt-and-decrypt-in-parallel-with-gpg/
3761 * Using GNU Parallel to create a SVM classifier
3762 http://ivanyu.me/blog/2013/12/01/parallel/
3764 * Parallel xz compression
3765 http://anthon.home.xs4all.nl/rants/2013/parallel_xz/
3767 * Got CPUs to burn? Put 'em to work with GNU parallel
3768 http://baoilleach.blogspot.dk/2013/11/got-cpus-to-burn-put-em-to-work-with.html
3771 http://pastebin.com/JmnB9ffq
3773 * Gnu Parallel for fun and profit
3774 https://gist.github.com/celoyd/f7eb55ad69c9b33fd8c3
3776 * Parallelization of Exploitation
3777 http://rantsideasstuff.com/parallelization-of-exploitation/
3779 * Running assemblies in parallel
3780 https://khmer-protocols.readthedocs.org/en/v0.8.3/metagenomics/4-assemble.html
3782 * Procesando la contabilidad del PP
3783 http://www.neorazorx.com/2013/07/procesando-la-contabilidad-del-pp.html
3785 * Mon make à moi (French)
3786 http://www.slideshare.net/lindenb/mon-make-moi-tout-sauf-galaxy
3788 * Bug fixes and man page updates.
3793 * A citation notice is printed on stderr only if stderr is a terminal,
3794 the user has not specified --no-notice and the user has not run
3795 --bibtex once. This makes the release alpha quality.
3797 * --compress will compress temporary files. If the output is big and
3798 very compressible this will take up less disk space in $TMPDIR and
3799 possibly be faster due to less disk I/O.
3801 * --compress-program comtrols which program to use for compressing
3804 * --bar show progress as a progress bar compatible with zenity.
3806 * --resume can now be used with --result: Jobs already run will be
3809 * --transfer and --basefile support paths relative to the --workdir by
3810 inserting /./ into the path.
3812 * GNU Parallel was cited in: fastphylo: Fast tools for phylogenetics
3813 http://www.biomedcentral.com/1471-2105/14/334/abstract
3815 * Using GNU parallel
3816 http://davetang.org/muse/2013/11/18/using-gnu-parallel/
3818 * Techlux - GNU - Parallel (German)
3819 https://techlux.de/blog/2013/11/07/gnu-parallel/
3821 * awk, sed, bzip2, grep, wc на всех ядрах
3822 http://vk.com/page-30666517_45528467
3824 * 如何利用多核CPU來加速你的Linux命令 — awk, sed, bzip2, grep, wc等
3825 http://www.hksilicon.com/kb/articles/290543/CPULinuxawk-sed-bzip2-grep-wc
3827 * GNU Parallel (Japanese)
3828 http://jarp.does.notwork.org/diary/201311b.html#20131117
3830 * Bug fixes and man page updates.
3835 * --transfer files with /./ in the path will copy the files relative
3838 * The maximal command length is now cached in a file halfing the
3841 * GNU Parallel was cited in: Investigating speaker gender using rhythm
3842 metrics in Arabic dialects
3843 http://ieeexplore.ieee.org/xpl/login.jsp?tp=&arnumber=6602389
3845 * GNU Parallel was cited in: Tiedon erist ̈minen ja visualisointi a
3846 lastensuojelun asiakaskertomuksista
3847 https://tampub.uta.fi/handle/10024/84978
3849 * Some Additional Useful Bioinformatics Software
3850 http://nix-bio.blogspot.dk/2013/10/additional-software-for-bioinformatics.html
3852 * GNU Parallel Example Screen Cast (bil to Geotiff conversion)
3853 http://www.youtube.com/watch?v=PpF27eC7Mys
3855 * Using GNU Parallel to roll-your-own Map Reduce!
3856 http://www.rankfocus.com/hello-world/
3858 * Use multiple CPU Cores with your Linux commands
3859 http://www.rankfocus.com/use-cpu-cores-linux-commands/
3861 * Using GNU Parallel at HPC @ Uni.lu
3862 https://hpc.uni.lu/users/use_cases/
3864 * Scaling up with parallelization
3865 https://www.msi.umn.edu/sites/default/files/AdvPython_1.pdf
3867 * How to teach yourself to be a technical tester
3868 http://infiniteundo.com/post/62421363463/qa-toc
3870 * Faster Rasters For All
3871 http://2013.foss4g.org/conf/programme/presentations/52/
3873 * Optimizing translated file downloads
3874 http://www.smartling.com/blog/2013/05/20/optimizing-translated-file-downloads/
3876 * EMC NetWorker parallel saveset cloning with nsrclone and GNU parallel
3877 http://www.beebotech.com.au/2013/10/emc-networker-parallel-saveset-cloning-with-nsrclone-and-gnu-parallel/
3879 * Best Practices for Amazon EMR
3880 http://media.amazonwebservices.com/AWS_Amazon_EMR_Best_Practices.pdf
3882 * Computing checksums for backup
3883 https://identi.ca/evan/note/6yf1GzAARtyBhj__xzMvAg
3885 * Un exemplu de utilizare a programului GNU parallel
3886 http://vundicind.blogspot.dk/2013/10/exemplu-utilizare-gnu-parallel.html
3889 http://www.slideshare.net/drakeguan/part1-23705978
3891 * なんか気持ちよかです Gnu Parallel
3892 http://a3-lab.jpn.org/note/%E3%81%AA%E3%82%93%E3%81%8B%E6%B0%97%E6%8C%81%E3%81%A1%E3%82%88%E3%81%8B%E3%81%A7%E3%81%99-gnu-parallel
3894 * Bug fixes and man page updates.
3899 * PDF-files of documentation is now included.
3901 * Cloning at warp speed 100 VMs in 1 minute using one command line
3902 http://www.beebotech.com.au/tag/command-line/
3904 * Calcul Quebec's introduction to GNU Parallel
3905 https://wiki.calculquebec.ca/w/GNU_parallel
3907 * Brincando com o GNU parallel
3908 http://blog.tadeucruz.com/2013/09/brincando-com-o-gnu-parallel/
3910 * GNU Parallelで並列処理を行う
3911 http://qiita.com/PENGUINANA_/items/af27a833e835fe17f09b
3913 * Bug fixes and man page updates.
3918 * A tutorial showing much of GNU Parallel's functionality. Spend an
3919 hour walking through the tutorial. Your commandline will love you
3920 for it. man parallel_tutorial
3922 * --line-buffer will buffer output on line basis. --group keeps the
3923 output together for a whole job. --ungroup allows output to mixup
3924 with half a line coming from one job and half a line coming from
3925 another job. --line-buffer fits between these two; it prints a full
3926 line, but will allow for mixing lines of different jobs.
3928 * --record-env records all variables and functions set. Useful to
3929 record the normal environment before using --env _.
3931 * --env _ exports all functions and variables to the remote server
3932 except for the ones recorded.
3934 * New signing key. Due to recommendations from NIST
3935 http://www.keylength.com/en/4/ the signing key was changed from
3936 1024D/ID:FFFFFFF1 to 9888R/ID:88888888.
3938 * Agalma: an automated phylogenomics workflow
3939 http://arxiv.org/pdf/1307.6432
3941 * Job ad asking for GNU Parallel expertise
3942 http://seattle.craigslist.org/est/sof/4006079352.html
3944 * Transient Beowulf Clustering with GNU Parallel and SSHfs
3945 http://www.reddit.com/r/linux/comments/1ka8mn/transient_beowulf_clustering_with_gnu_parallel/
3947 * Aligning to unique regions
3948 http://davetang.org/muse/2013/07/22/aligning-to-unique-regions/
3950 * Top 10 scripting tricks for basic bioinformatics
3951 http://students.washington.edu/bowmanjs/wordpress/?p=873
3953 * Using GNU Parallel to speed up and simplify data analyzes
3954 http://www.sergeymarkov.com/blog/2013/07/using-gnu-parallel-to-speed-up-and-simplify-data-analyzes/
3956 * Compression of files in parallel using GNU parallel
3957 http://codextechnicanum.blogspot.dk/2013/07/compression-of-files-in-parallel-using.html
3959 * Using GNU Parallel with Amazon
3960 media.amazonwebservices.com/AWS_Amazon_EMR_Best_Practices.pdf
3962 * Some useful comments on GNU Parallel
3963 https://news.ycombinator.com/item?id=6209767
3965 * Using GNU Parallel to count reads mapping to genes for multiple BAMs
3966 http://drduanehassane.com/blog/sequencing-resources
3968 * TimeMachineっぽいバックアップスクリプト
3969 http://rio.tc/2013/07/timemachine-1.html
3971 * GNU ParallelでAndroid NDKの全バージョンを一括ダウンロード
3972 http://qiita.com/mazgi/items/b10bf0ff3da2045d19ab
3974 * Bug fixes and man page updates.
3979 * --round-robin with --pipe will write all blocks to already running
3982 * --env can now transfer Bash function for remote execution. That is
3985 * GNU Parallel was used (unfortunately with improper citation) in:
3986 Understanding the Impact of E-Commerce Software on the Adoption of
3987 Structured Data on the Web
3988 http://link.springer.com/chapter/10.1007/978-3-642-38366-3_9#page-1
3990 * GNU Parallel was used (unfortunately with improper citation) in:
3991 CWI at TREC 2012, KBA track and Session Track
3992 http://trec.nist.gov/pubs/trec21/papers/CWI.kba.session.final.pdf
3994 * Mitigation of Adverse Effects Caused by Shock Wave Boundary Layer
3995 Interactions through Optimal Wall Shaping.
3996 http://arc.aiaa.org/doi/abs/10.2514/6.2013-2653
3998 * Using GNU parallel to convert images.
3999 http://www.brunokim.com.br/blog/?p=18
4001 * A quick way to parallelize.
4002 http://timotheepoisot.fr/2013/07/08/parallel/
4004 * GNU Parallel 20130522 ('Rana Plaza') 发布,并行作业执行.
4005 http://www.open-open.com/news/view/371301
4007 * Quite a few bug fixes and man page updates.
4012 * --xapply now recycles arguments if an input source has more
4013 arguments than others.
4015 * The sleep time between jobs is now both increased and decreased
4018 * 10 seconds installation check the signature using GnuPG if GnuPG is
4021 * Developer job asking for GNU Parallel expertise.
4022 http://careers.stackoverflow.com/jobs/35562/developer-big-data-geo-and-web-climate-central
4024 * A small utility program to run youtube-dl in parallel.
4025 https://github.com/dlh/youtube-dl-parallel
4027 * Parallelizing Freesurfer:
4028 http://blog.cogneurostats.com/?p=148
4030 * Bug fixes and man page updates.
4035 * --ctrlc is now default if --pipe is not used; thus making it
4036 possible to kill remotely started jobs simply by pressing Ctrl-C.
4038 * --timeout 200% now means kill jobs that take more than twice the
4039 time of the median run time of a job.
4041 * Jobs are now distributed round robin when having mulitiple
4042 --sshlogin instead of filling up one --sshlogin at a time.
4044 * niceload: darwin version of --io --mem --swap. Thanks to Anders F
4047 * Bug fixes and man page updates.
4052 * 10 seconds installation: wget -O - pi.dk/3 | sh
4054 * HPUX CPU/core detection. Thanks to Javier Tarradas.
4056 * CPU detection for HURD, IRIX, SCO OpenServer and (old) HPUX.
4058 * --ctrlc will send SIGINT to tasks running on remote computers and
4061 * --load now uses 'ps' to see immediately see the number of running
4062 processes instead of 'uptime' thus making --load react much faster.
4064 * Testing on Centos 3.9 and FreeBSD 7 revealed a lot of compability
4065 bugs. Some of these required quite extensive changes making this
4066 release beta quality.
4068 * --retries works with --onall.
4070 * The new --load computation now works on FreeBSD 7.
4072 * --nice works under tcsh.
4074 * GNU Parallel is officially supported in NetBSD.
4075 http://ftp.netbsd.org/pub/pkgsrc/current/pkgsrc/parallel/parallel/README.html
4077 * GNU Parallel is accepted for openSUSE.
4078 http://software.opensuse.org/package/gnu_parallel
4080 * GNU Parallel can be installed under Microsoft Windows (CygWin).
4081 http://blogs.msdn.com/b/hpctrekker/archive/2013/03/30/preparing-and-uploading-datasets-for-hdinsight.aspx
4083 * Excuses for not installing GNU Parallel.
4084 http://oletange.blogspot.dk/2013/04/why-not-install-gnu-parallel.html
4086 * Job advert that requires GNU Parallel competence.
4087 http://versium.com/about/careers/
4089 * Parallelizing Batch Jobs for Fun and Profit.
4090 http://mikeseidle.com/tech/programming/2013/03/parallelizing-batch-jobs
4092 * Processing Transcription Start Sites(TSS) for the entire Mouse genome.
4093 http://qbrc.swmed.edu/2013/03/gnu-parallel-speeding-up-unix-commands-and-scripts/
4095 * GNU parallel is used throughout Scrimer.
4096 http://scrimer.readthedocs.org/en/latest/
4098 * GNU Parallel helped making public documents searchable.
4099 http://danpalmer.me/blog/articles/2013-04-06-unlocking-hillsborough.html
4101 * Identifying big movie files (German).
4102 http://blackappsolutions.wordpress.com/2013/03/23/wenn-der-plattenplatz-knapp-wird-filme-identifizieren-die-viel-platz-belegen/
4104 * Bug fixes and man page updates.
4109 * --resume works with --pipe.
4111 * --resume-failed will go through --joblog, redo the failed jobs and
4112 then continue like --resume.
4114 * Negative positional arguments count from the end: {-1} means the
4115 last argument, {-2} the second to last.
4117 * NetBSD CPU detection.
4119 * --blocksize increases exponentially if it smaller than a full
4122 * Processing n-line records (--pipe -L n) is now much faster.
4124 * --tollef is obsoleted after discussion on the mailing list.
4126 * GNU Parallel is the highest rated tool on:
4127 http://www.biostars.org/show/tools/?sort=votes&since=all%20time
4129 * GNU Parallel was loved during FSFE's #ilovefs campaign.
4130 http://fsfe.org/news/2013/news-20130212-01.en.html
4132 * Using GNU Parallel with s3cmd (Japanese).
4133 http://blog.suz-lab.com/2013/02/s3cmd-gnu-paralells3.html
4135 * Intro to GNU Parallel (Chinese).
4136 http://guiquanz.github.com/2013/02/12/gnu-parallel-intro/
4138 * Bug fixes and man page updates.
4143 * --sshdelay Delay starting next ssh by secs seconds. GNU parallel
4144 will pause secs seconds after starting each ssh. secs can be less
4147 * Official OpenBSD port:
4148 http://ftp.openbsd.org/ports/sysutils/parallel/
4150 * Official DragonFlyBSD package:
4151 http://www.mirrorservice.org/sites/ftp.dragonflybsd.org/packages/amd64/DragonFly-3.0.0/stable/parallel/
4153 * Post about niceload in Hungarian:
4154 http://commandline.blog.hu/2013/01/02/niceload
4156 * 自炊スキャンデータをKobo Gloに最適化
4157 http://interstadial.wordpress.com/2013/01/20/
4159 * GNU parallel+ssh で複数のリモートホストに複数のコマンドを実行させる
4160 http://oshiire.to/archives/1686
4162 * Bug fixes and man page updates.
4167 * --shebang-wrap makes is possible to parallelize scripts by putting
4168 parallel in the shebang line (the first #! line in scripts).
4170 * --delay puts in a delay after starting each job. Useful to avoid
4171 raceconditions and thundering herd problems.
4173 * --results now uses / as separator instead of TAB and thus creates
4174 subdirs. Thanks to Drew Frank.
4176 * parallel: OpenBSD CPU detection. Thanks to Michał Markowski.
4178 * niceload --sensor allows for negative numbers to signify a lower
4179 number means the limit is lower.
4181 * niceload --prg suspend a named program that is already running.
4183 * niceload multiple --pid suspend process ids that are already running.
4185 * Convertir des images avec find et imagemagick
4186 http://roger.b.over-blog.com/article-convertir-des-images-avec-find-et-imagemagick-113416637.html
4188 * Bug fixes and man page updates.
4193 * niceload --sensor makes it possible to use a program to control if a
4194 program should be suspended.
4196 * GNU Parallel was part of the justification for Nordic Free Software
4198 https://fsfe.org/news/2012/news-20121112-01.html
4200 * Dateien schneller packen und konvertieren mit GNU parallel
4201 http://www.linux-community.de/Archiv/Tipp-der-Woche/Dateien-schneller-packen-und-konvertieren-mit-GNU-parallel
4203 * Processing images from Lunar Reconnaissance Orbiter Narrow Angle
4204 Camera http://lunokhod.org/?p=774
4206 * GNU Parallel is used in types2: Type and Hapax Accumulation Curves
4207 http://www.cs.helsinki.fi/u/josuomel/types2/
4209 * GNU Parallel used in: A Hybrid Factor Analysis and Probabilistic
4210 PCA-based system for Dictionary Learning and Encoding for Robust
4212 http://www.superlectures.com/odyssey2012/lecture.php?id=8&lang=en
4213 http://www.cse.iitm.ac.in/~mrsri/ppca.pdf
4215 * Mapreduce avec parallel, cat et une redirection
4216 http://datacratic.com/site/blog/mapreduce-avec-parallel-cat-et-une-redirection
4218 * GNU Parallel for Large Batches of Small Jobs
4219 https://support.scinet.utoronto.ca/wiki/images/7/7b/Tech-talk-gnu-parallel.pdf
4221 * GNU Parallel used in black belt tip (8:50-10:12)
4222 https://aws.amazon.com/apac/awspodcast/episode20/
4224 * Bug fixes and man page updates.
4229 * --results structures output files so they can be imported using
4230 Pandas (http://pandas.pydata.org/). Useful when doing simulations to
4231 select output from some arguments.
4233 * Use --env to transfer environment variables through ssh to remote
4236 * GNU Parallel is accepted for Ubuntu Quantal.
4237 http://packages.ubuntu.com/quantal/parallel
4239 * GNU Parallel was requested for OpenSUSE (go vote!)
4240 https://features.opensuse.org/314461
4242 * Kneth's Korner: Map/Reduce and GNU Parallel
4243 http://kenneth.geisshirt.dk/2012/10/mapreduce-and-gnu-parallel.html
4245 * Blog post in Japanese by Siguniang.
4246 https://siguniang.wordpress.com/2012/09/09/notes-on-gnu-parallel-the-command-line-power-tool/
4247 (Siguniang mentions the logo is called 'The Cafe Wall Illusion')
4248 http://www.michaelbach.de/ot/ang_cafewall/index.html
4250 * GNU Parallel, where have you been all my life?
4251 http://ssdigit.nothingisreal.com/2012/09/gnu-parallel-where-have-you-been-all-my.html
4253 * Reference-free ddRADseq analysis tools uses GNU Parallel.
4254 https://github.com/brantp/rtd#readme
4256 * When bash just isn’t quick enough.
4257 https://soimasysadmin.wordpress.com/2012/08/15/gnu-parallel-when-bash-just-isnt-quick-enough/
4259 * Using GNU Parallel to Package Multiple Jobs in a Single PBS Job.
4260 http://www.nas.nasa.gov/hecc/support/kb/Using-GNU-Parallel-to-Package-Multiple-Jobs-in-a-Single-PBS-Job_303.html
4262 * GNU Parallel Notes.
4263 http://xed.ch/help/parallel.html
4265 * Bug fixes and man page updates.
4270 * Due to a bugfix the main flow has changed. Making this release beta
4273 * Parallel Proxy Scraper & Checker Tool
4274 https://www.youtube.com/watch?v=iXCeR_XsP6o
4276 * Bug fixes and man page updates.
4281 * GNU Parallel was presented at Chiang Mai Bar Camp
4282 http://barcampchiangmai.org/
4284 http://www.cnx-software.com/2012/07/02/use-gnu-parallel-to-speed-up-script-execution-on-multiple-cores-andor-machines/
4286 * I don't always max out all my CPUs, but when I do, I do it with GNU
4288 http://memegenerator.net/instance/22638454
4290 * Bug fixes and man page updates.
4295 * '-L n --pipe' will use records of n lines. This is useful when
4296 processing data that have fixed records with a fixed number of
4299 * --filter-hosts will remove down hosts. For each remote host: check
4300 that login through ssh works. If not: do not use this host.
4301 Currently you can not put --filter-hosts in a profile, $PARALLEL,
4302 /etc/parallel/config or similar. This is because GNU Parallel uses
4303 GNU Parallel to compute this, so you will get an infinite loop. This
4304 will likely be fixed in a later release.
4306 * --pipe now uses fork() instead of busy wait. The performance should
4307 be better on computers with >10 cores while remaining the same on
4308 computers with few cores.
4310 * GNU Parallel will be represented at Chiang Mai Bar Camp.
4311 http://barcampchiangmai.org/
4313 * Indexing Big Data on Amazon AWS: The Screencast
4314 (Check out his T-shirt at 18:40-21:00).
4315 http://www.opensourceconnections.com/2012/06/06/indexing-big-data-on-amazon-aws-screencast/
4317 * biotoolbox uses GNU Parallel.
4318 https://code.google.com/p/biotoolbox/wiki/Pod_novo_wrapper
4320 * Spiceweasel uses GNU Parallel.
4321 https://github.com/mattray/spiceweasel
4323 * GNU Parallel part of The Administrators Challenge.
4324 http://challenge.twistedrack.com/questions/qs3.php
4326 * Finding Oldest Firefox Code using GNU Parallel.
4327 http://gregoryszorc.com/blog/2012/06/18/finding-oldest-firefox-code/
4329 * Bug fixes (quite a few for remote job running) and man page updates.
4334 * Timings in --joblog now with milliseconds.
4336 * Thesis using GNU Parallel (correctly cited; hooray!).
4337 http://scholarworks.sjsu.edu/etd_projects/222/
4340 http://www.perzl.org/aix/index.php?n=Main.Parallel
4342 * Prokka uses GNU Parallel.
4343 http://bioinformatics.net.au/prokka-manual.html
4345 * GNU Parallel was presented at MUUG.
4346 http://muug.mb.ca/blog/meetings/2012/05/09/may-8th-2012-rtfm-gnu-parallel1/
4348 * Blog post: Manipulating many or large files with GNU parallel.
4349 http://compbiously.blogspot.com/2012/05/manipulating-many-or-large-files-with.html
4351 * Blog post: Running commands in parallel using bash.
4352 http://blog.michaelboman.org/2012/04/running-commands-in-parallel-using-bash.html
4354 * Blog post in Hungarian.
4355 http://commandline.blog.hu/2012/05/03/gnu_parallel
4357 * Popularity of GNU Parallel in Debian explodes.
4358 http://qa.debian.org/popcon-graph.php?packages=parallel
4360 * Bug fixes and man page updates.
4365 * A race condition bug caused restructuring of a central piece of the
4366 code. Thus this release of GNU Parallel should be considered beta
4369 * sql --dbsize will now list sizes of all databases if given no
4372 * GNU Parallel is now in Debian Unstable.
4373 apt-get install parallel
4375 * Article: Computational and experimental analyses of
4376 retrotransposon-associated minisatellite DNAs in the soybean genome.
4377 http://www.biomedcentral.com/content/supplementary/1471-2105-13-s2-s13-s1.pdf
4379 * Blog post: GNU parallel - the best thing since sliced bread.
4380 https://arrayal.wordpress.com/2012/03/27/gnu-parallel-the-best-thing-since-sliced-bread/
4382 * Blog post: GNU Parallel makes everything faster.
4383 http://compbiously.blogspot.com/2012/03/gnu-parallel-makes-everything-faster.html
4385 * Blog post (German): Howto: GNU parallel.
4386 http://d24m.de/2012/04/05/howto-gnu-parallel/
4388 * Blog post: Running in Parallel
4389 http://interactivity.ifactory.com/2012/04/running-in-parallel/
4391 * 20000 watched the first intro video.
4394 * The first 5 have received their GNU Parallel merchandise
4395 https://www.gnu.org/software/parallel/merchandise.html
4397 * Bug fixes and man page updates.
4402 * Parallel Process Database Dumps.
4403 http://blog.mattoates.co.uk/2012/02/parallel-process-database-dumps.html
4405 * Using GNU Parallel to process images from Mars.
4406 http://lunokhod.org/?p=468
4408 * Using GNU Parallel with bzgrep.
4409 http://filip.rembialkowski.net/did-you-know-gnu-parallel/
4411 * Bug fixes and man page updates.
4416 * --workdir . will use the current working dir. If the current working
4417 dir is beneath your home dir, the value . is treated as the relative
4418 path to your home dir. This means that if your home dir is different
4419 on remote computers (e.g. if your login is different) the relative
4420 path will still be relative to your home dir.
4422 * A texinfo file is now generated from the POD file using pod2texi.
4424 * The bioinformatics article "Fast large-scale clustering of protein
4425 structures using Gauss integrals" mentions GNU Parallel. They forgot
4426 to add the reference. Please remember --bibtex if you use GNU
4427 Parallel in an article.
4428 http://bioinformatics.oxfordjournals.org/content/28/4/510.short
4430 * The first supporter received his merchandise. Did you order yours?
4431 https://www.gnu.org/software/parallel/merchandise.html
4433 * How to use GNU Parallel with samtools.
4434 http://zvfak.blogspot.com/2012/02/samtools-in-parallel.html
4436 * How to use GNU Parallel for vacuuming PostgreSQL tables.
4437 http://blog.timmattison.com/archives/2012/01/24/mini-hack-parallel-vacuuming-in-postgresql/
4439 * Converting e-books with Calibre and GNU Parallel.
4440 http://www.linkhal.de/blog/2012/01/converting-massive-e-book-collections-with-calibre-and-gnu-parrallel/
4442 * Using GNU Parallel for tailing logfiles from multiple servers.
4443 http://silviud.blogspot.com/2012/02/shell-parallel-processing.html
4445 * Bug fixes and man page updates.
4450 * --header : uses the first input line as column names and you can
4451 then use {colname} as a replacement string in the command. This also
4452 works with multiple :::'s.
4454 * --header <regexp> matches a header as a regular expression and
4455 repeats the header for each block with --pipe.
4457 * --resume resumes from the last unfinished job. Useful if you stop
4458 GNU Parallel and restart it later with the same arguments.
4460 * niceload now propagates exit status correctly.
4462 * Show your support for GNU Parallel. For a limited time you can get a
4463 GNU Parallel T-shirt+mug+pen+100 postcards at 20 EUR. See
4464 https://www.gnu.org/software/parallel/merchandise.html
4466 * Options -g -B -T -U -W -Y are retired as warned 6 months ago.
4468 * GNU Parallel referenced in article on Holographic Grid Cloud. Thanks
4469 to Stefano Gallozzi. http://arxiv.org/pdf/1112.6128
4471 * Article in IEEE Software on GNU Parallel. Thanks to Diomidis
4472 Spinellis. http://www.spinellis.gr/blog/20110911/
4474 * An article on Narwhal which uses GNU Parallel. They forgot to add
4475 the reference. Please remember --bibtex if you use GNU Parallel in
4477 http://bioinformatics.oxfordjournals.org/content/early/2011/11/08/bioinformatics.btr613.full.pdf
4479 * Blog post on using GNU Parallel to speed up BLAST queries:
4480 http://blog.mckuhn.de/2012/01/embarrassingly-parallel-blast-search.html
4482 * Video showing Wake-on-LAN with GNU Parallel.
4483 https://www.youtube.com/watch?v=0mB-yIyKFLQ
4485 * Using GNU Parallel with Solr.
4486 http://sujitpal.blogspot.com/2011/12/solr-report-generation-with-python.html
4488 * First job ad including GNU Parallel:
4489 http://seeker.dice.com/jobsearch/servlet/JobSearch?op=101&dockey=xml/7/6/76f858de083a094f74b1a5d3ba53ffc5@endecaindex
4491 * Bug fixes and man page updates.
4496 * --timeout will now kill grandchildren.
4498 * Interview in Hacker Public Radio.
4499 http://hackerpublicradio.org/eps.php?id=0860
4501 * Blog post in Chinese.
4502 http://blog.sina.com.cn/s/blog_3f7652740100y0ju.html
4504 * Bug fixes and man page updates.
4509 * GNU Parallel package for Fedora.
4510 https://admin.fedoraproject.org/pkgdb/acls/name/parallel
4512 * Using GNU Parallel with Mozilla cross referencing.
4513 https://blog.mozilla.com/it/2011/11/15/mxr-improvements/
4515 * Neat flash presentation of GNU Parallel.
4516 http://prezi.com/0nq74b2elgtx/about-gnu-parallel/
4518 * How to create tar files of dirs in parallel.
4519 https://joneslee85.wordpress.com/2011/11/22/shell-tips-how-to-recursively-archive-many-folders/
4521 * Article in Admin Network&Security by Ben Martin.
4522 http://www.admin-magazine.com/HPC/Articles/GNU-Parallel
4524 * Blog post in Polish.
4525 http://blog.tiger.com.pl/2011/01/05/gnu-parallel/
4527 * Blog post on using GNU Parallel of Mac OS X.
4528 http://www.0xcb0.com/2011/10/19/running-parallel-bash-tasks-on-os-x/
4530 * Blog post in English by researcher.
4531 http://zandyware.wordpress.com/2011/10/15/gnu-parallell-make-best-use-of-your-multicore-computer/
4533 * Blog entry in Chinese.
4534 http://blog.csdn.net/tossense/article/details/6889026
4536 * Blog entry in Japanese on managing many servers.
4537 http://hiroakis.com/blog/2011/11/13/gnu-parallel/
4539 * GNU Parallel is now part of ppbs.
4540 http://physiology.med.cornell.edu/faculty/mason/lab/ppbs/introduction/introduction.html
4542 * How to use GNU Parallel with MCX.
4543 http://mcx.sourceforge.net/cgi-bin/index.cgi?MMC/Doc/MMCCluster
4545 * Bug fixes and man page updates.
4550 * --tag prepends lines with the argument(s). If used with --(n)onall
4551 the line will be prepended with the sshlogin instead.
4553 * --shellquote does not run the command but quotes it using \'s.
4554 Useful for making quoted composed commands.
4556 * --profile can now be repeated merging multiple profiles.
4558 * --bibtex now gives the BibTeX entry.
4559 Thanks to Aleksandr Levchuk for testing.
4561 * Makefile for simple .deb package.
4562 cd packager/debian; make
4564 * sql: --list-databases lists the databases.
4566 * GNU Parallel officially in Fedora 16
4567 http://www.spinics.net/lists/fedora-package-announce/msg67130.html
4569 * Blog post on recompression FLAC audio.
4570 http://blog.oxplot.com/2011/08/reflac-flac-cleanser.html
4572 * The most complex use of ::: I have seen so far.
4573 http://agentzlerich.blogspot.com/2011/09/following-up-on-previous-failures-ive.html
4575 * Example of using GNU Parallel with sudo.
4576 http://loopkid.net/articles/2011/10/07/recursive-chmod-and-chown-on-files
4578 * Use wget and gnu parallel to download mp3s at rocket speed.
4579 http://sdbrain.posterous.com/use-wget-and-gnu-parallel-to-download-mp3s-at
4581 * First CV referring to GNU Parallel.
4582 http://www.peopleperhour.com/freelancers/stephen_/internet_researcher_and_protocol_develop/140602
4584 * Cartwright labs usage of GNU Parallel.
4585 http://cartwrightlab.wikispaces.com/The+Most+Bang+for+Your+Buck
4587 * Bug fixes and man page updates.
4592 * --timeout implemented so that slow commands can be killed
4594 * CPU detection improved for Mac OSX. Thanks to Wayne E. Seguin.
4596 * Example of a parallel webcrawler in the man page.
4598 * Backup up PostgreSQL with GNU Parallel. Thanks to Stephane Wirtel.
4599 http://wirtel.be/2011/07/15/rsync_parallel/
4601 * Blog post in Japanese.
4602 http://dminor11th.blogspot.com/2011/08/gnu-parallel.html
4604 * Blog post about optimizing JPEGs. Thanks to Thomas Jost.
4605 http://schnouki.net/2011/07/22/optimizing-jpeg-pictures/
4607 * Bug fixes and man page updates.
4612 * niceload: --hard will suspend a program if a limit is reached - as
4613 opposed to just slowing the program down.
4615 * niceload: --soft will slow the program down - as opposed to
4616 suspending the program completely.
4618 * niceload: --run-io will slow down a program if disk io goes above a
4621 * niceload: --run-load will slow down a program if loadaverage goes
4622 above a certain limit.
4624 * niceload: --run-mem will slow down a program if free memory goes
4625 below a certain limit.
4627 * niceload: --run-noswap will slow down a program if the computer is
4630 * niceload: --start-io, --start-load, --start-mem, --start-noswap will
4631 defer starting a program until the system is below the limit.
4633 * --io, --load, --mem, and --noswap sets both --run-* and --start-*.
4635 * niceload got a major rewrite and is now object oriented.
4637 * GNU Parallel was presented at Nordic Perl Workshop 2011.
4638 http://conferences.yapceurope.org/npw2011/talk/3416
4640 * Blog post about zcat and GNU Parallel. Thanks to Dr. John.
4641 http://drjohnstechtalk.com/blog/2011/06/gnu-parallel-really-helps-with-zcat/
4643 * 2 blog posts in Japanese. Thanks to Negima.
4644 http://d.hatena.ne.jp/negima1976/20110607/1307412660
4645 http://d.hatena.ne.jp/negima1976/20110628/1309252494
4647 * Blog post for bioinformatics. Thanks to Chris Miller.
4648 http://chrisamiller.com/science/2010/05/26/use-parallel-for-easy-multi-processor-execution/
4650 * Bug fixes and man page updates.
4655 * --onall will run all the jobs on all the computers. This is useful
4656 for systemadinistrators having multiple servers.
4658 * --nonall runs like --onall but reads no arguments from stdin
4659 (standard input), so is possible to do:
4660 parallel --nonall -S computer1,computer2 uptime
4662 * Context replace now works with multiple input sources:
4663 parallel -X echo {1}-{2} ::: 1 2 3 ::: a b c
4665 * --noswap do not start a job on a server that is swapping.
4667 * Article: Parallel processing without Hadoop!
4668 http://www.solutionhacker.com/parallel-processing-without-hadoop/
4670 * Article in Linux Magazine (Spanish). Thanks to Ben Martin.
4671 http://www.linux-magazine.es/issue/67/
4673 * First blog post in Korean. Thanks to 민병국.
4674 http://blog.daum.net/_blog/BlogTypeView.do?blogid=02RQ3&articleno=13380895&admin=#
4676 * Blog post in Japanese. Thanks to Naoya Nakazawa.
4677 http://www.sssg.org/blogs/naoya/archives/2003
4679 * Blog post in English. Thanks to Dagon.
4680 http://hekate.homeip.net/2011/05/29/
4682 * Bug fixes and man page updates.
4687 * Multiple ::: can be put on the command line and will be treated
4688 similar to contents from multiple -a's.
4690 * ::: and :::: can now be mixed on the command line. Use {1} .. {n} to
4691 refer to inputs from the different input sources.
4693 * --xapply is now needed to get xapply's behaviour of reading one line
4694 from each of the input sources.
4696 * Multiple input sources will cause all combinations of arguments from
4697 the sources to be generated. E.g. 'parallel echo {1}+{2} ::: 1 2 :::
4698 a b c' will print 1+a 1+b 1+c 2+a 2+b 2+c. This can often replace
4701 * Implemented {//} for the input line with the basename removed (dirname).
4703 * New video showing the new ::: and :::: input sources.
4704 http://tinyogg.com/watch/iOdhU/ http://www.youtube.com/watch?v=fOX1EyHkQwc
4706 * GNU Parallel now has a logo.
4707 http://www.gnu.org/software/parallel/logo.png
4709 * Article about GNU SQL in USENIX Magazine ;login: (print)
4710 http://www.usenix.org/publications/login/2011-04/
4712 * Using GNU Parallel with EC2. Thanks to Kevin Wu.
4713 http://blog.kevinformatics.com/post/4970574713/interested-in-your-experience-using-gnu-parallel-in
4715 * Review with idea for {..} and {...} in Japanese. Thanks to ichii386.
4716 http://d.hatena.ne.jp/ichii386/20110426
4718 * Upgrade GNU Parallel using Macports. Thanks to Phil Hollenback.
4719 http://www.hollenback.net/index.php/MacportsParallel
4721 * Robert from Echo One discusses using processes instead of threads:
4722 http://rrees.wordpress.com/2011/04/25/many-cores-many-threads/
4724 * How to run GNU Parallel on a SLURM cluster. Thanks to Kevin Stock.
4725 http://www.kevinstock.org/2011/04/using-the-ri-cluster/
4727 * Short article about using GNU Parallel with lame:
4728 http://loopkid.net/articles/2011/04/30/accelerate-lame-mp3-conversion
4730 * Using GNU Parallel to run tail -f in Japanese. Thanks to Clouder.
4731 http://blog.clouder.jp/archives/001140.html
4733 * BBC Research & Development uses GNU Parallel:
4734 http://www.bbc.co.uk/blogs/researchanddevelopment/2010/11/prototyping-weeknotes-41-26112.shtml
4736 * Short article about using GNU Parallel on RHEL. Thanks to Rishi Deshpande.
4737 http://nuclear-imaging.info/site_content/2011/05/11/gnu-parallel/
4739 * Using GNU Parallel for FLAC->MP3 conversion. Thanks to Derek Marcotte.
4740 http://derek.chezmarcotte.ca/?p=286
4742 * Bug fixes and man page updates.
4747 * {#} now works as an alias for $PARALLEL_PID.
4749 * --eta now estimates way more accurately.
4751 * CPU detection code for AIX thanks to Christian Netrwal.
4753 * --joblog contains exitcode.
4755 * Thanks to Ævar Arnfjörð Bjarmason for reading my code.
4757 * GNU Parallel was presented at:
4758 - LUGA, Augsburg, 2011-03-26, http://www.luga.de/Aktionen/LIT-2011/Programm
4759 - OSAA.dk, Aarhus, 2011-04-12
4761 * Blog entry in Japanese. Thanks to Riywo.
4762 http://blog.riywo.com/2011/04/19/022802
4764 * Example of how to use GNU Parallel on PBS clusters. Thanks to Andrew
4765 J Dolgert: http://web0.tc.cornell.edu/wiki/index.php?title=Gnu_Parallel
4767 * First example of using GNU Parallel in Hebrew. Thanks to omry.
4770 * Intro video got past 10000 hits.
4771 http://www.youtube.com/watch?v=OpaiGYxkSuQ
4773 * Bug fixes and man page updates.
4778 * --tollef to be switch compatible with Tollef's parallel. This will
4779 cause -l to mean --load, and the argument separator will be --
4782 * --gnu will force GNU Parallel to behave like GNU Parallel even if
4785 * Site wide config file: /etc/parallel/config
4787 This should solve the issue with some packagers renaming GNU
4788 Parallel to gparallel to avoid the naming conflict.
4790 By putting --tollef in the site wide config file you can deinstall
4791 Tollef's parallel and install GNU Parallel instead without any
4792 change for users or scripts. This is useful for packagers that
4793 currently rename GNU Parallel or simply do not distribute GNU
4794 Parallel because the command name conflicts with Tollef's parallel.
4796 * -L 0 -n 0, and -N 0 implemented. They will read one argument,
4797 but insert 0 arguments on the command line. Useful if you just want
4798 to run the same command with the same arguments a number of times.
4800 * GNU Parallel is now in Fink. Thanks to Jesse Alama.
4801 http://pdb.finkproject.org/pdb/package.php/parallel
4803 * Opscode Cookbook for Chef. Thanks to Joshua Timberman.
4804 https://github.com/opscode/cookbooks/tree/master/gnu_parallel
4806 * Man page examples translated into Japanese. Thanks to Koshigoe.
4807 http://w.koshigoe.jp/study/?%5Bsystem%5D+GNU+parallel+%BB%C8%CD%D1%CE%E3#l13
4809 * GNU Parallel will be presented at:
4810 - LUGA, Augsburg, 2011-03-26, http://www.luga.de/Aktionen/LIT-2011/Programm
4811 - OSAA.dk, Aarhus, 2011-04-12
4813 * Video of presentation from FSCONS 2010-11-07. The presenter was
4814 _really_ hoarse that day (Something to do with loads of alcohol the
4815 night before). http://vimeo.com/20838834
4817 * Review with examples in German. Thanks to M. Nieberg.
4818 http://kenntwas.de/2011/linux/gnu-parallel/
4820 * A review of the --pipe option in German. Thanks to Mathias Huber.
4821 http://www.linux-magazin.de/NEWS/GNU-Parallel-20110205-stueckelt-Daten
4823 * A small example of grepping maillogs. Thanks to François Maillet.
4824 http://www.francoismaillet.com/blog/?p=399
4826 * Using GNU Parallel instead of xargs. Thanks to James Cuff.
4827 http://blog.jcuff.net/2011/02/on-train-ride-in.html
4829 * Bug fixes and man page updates.
4834 * --pipe splits piped data into blocks. Each block is piped to a
4835 program for processing. The piping and the programs will be run in
4836 parallel. Useful if the data you want to process is data for a
4837 program and not arguments.
4839 * --blocksize sets the blocksize in bytes for --pipe. The blocksize is
4840 approximate. It can deviate as much as the size of one record.
4843 * --recstart sets the string matching the start of a
4844 record. Default is "".
4846 * --recend sets the string matching the end of a
4847 record. Default is '\n'. To specify none use --recend "".
4849 If both --recstart and --recend are set, the end of a record must be
4850 followed immediately by a start of a record. This is useful if
4851 either recend or recstart can occur in the middle of a record.
4853 * --remove-rec-sep removes the string matched by --recstart and
4856 * --regexp will make GNU Parallel treat --recstart and --recend as
4857 regular expressions.
4859 * --output-as-files will put the output of the programs into files and
4860 instead of giving the output GNU Parallel will output the name of
4863 * -N if used with --pipe sets the number of records to read.
4865 * New video showing --pipe at
4866 http://www.youtube.com/watch?v=1ntxT-47VPA
4868 * GNU Parallel was presented at FOSDEM.
4870 * Article in USENIX Magazine ;login: (print)
4871 http://www.usenix.org/publications/login/2011-02/
4873 * GNU Parallel is now on ohloh.net. Thanks to Wim Muskee.
4874 https://www.ohloh.net/p/gnu-parallel
4876 * Advanced recursive example. Thanks to Ruarí Ødegaard.
4877 http://my.opera.com/ruario/blog/2011/01/24/editing-debian-packages-more-fun-with-gnu
4879 * Small example on using GNU Parallel through 0install (German).
4880 http://forum.ubuntuusers.de/topic/gnu-parallel-mit-zero-install-kurzinfo-kein-wi/
4882 * Bug fixes and man page updates.
4887 * --joblog makes a simple log of completed jobs.
4889 * -X now spreads arguments between job slots when reaching last
4890 argument. Use -j1 to avoid this.
4892 * People on the email list have voted -j+0 to be the new default
4895 * First review in Polish. Thanks to Patryk Krawaczyński.
4896 http://nfsec.pl/root/2458
4898 * Review in Spanish (in print).
4899 https://www.linux-magazine.es/issue/67/moreinfo.html
4901 * Review in English. Thanks to Brian Gough.
4902 http://blogs.fsfe.org/bjg/2011/01/gnu-parallel-a-map-operator-for-the-command-line/
4904 * Review in French. Thanks to Denis Dordoigne.
4905 http://linuxfr.org/2010/12/29/27715.html
4907 * Review in Spanish.
4908 http://gufete.net/index.php?entry=entry110116-200022
4910 * Article with advanced recursive example. Thanks to Ruarí Ødegaard
4911 http://my.opera.com/ruario/blog/2011/01/18/fun-with-gnu-parallel
4913 * Use case for memcache.
4914 http://www.dctrwatson.com/2010/12/how-to-dump-memcache-keyvalue-pairs-fast/
4916 * Bug fixes and man page updates.
4921 * GNU niceload is now part of GNU Parallel. GNU niceload slows down a
4922 program if the load average is above a certain limit.
4924 * Implemented --tmpdir to buffer standard output and standard error in
4927 * Implemented --load to wait until the load is below a limit before
4928 starting another job on that computer.
4930 * Implemented --nice set the niceness of jobs running both locally and
4933 * Implemented --dry-run to print the job without running it.
4935 * Implemented --tty as the old default of assigning a tty to the first
4936 job causes problems.
4938 * Review with focus on clusters. Thanks to Taylor Gillespie
4939 http://www.unixpronews.com/unixpronews-49-20101019GNUParallelSpeedUpProcessingWithMulticoresClusters.html
4941 * Review with focus on protein similarity.
4942 http://kevinformatics.tumblr.com/post/2142473893/cluster-like-computing-using-gnu-parallel
4944 * Review in Spanish.
4945 http://gr3p.com/2010/12/gnu-parallel-acelera-tus-scripts-en-linux
4947 * Quite a few bug fixes and man page updates.
4952 * Implemented {/} for the input line with the path removed (basename).
4954 * Implemented {/.} for the input line with extension and path removed
4957 * Output from --progress is now sent to standard error instead of
4960 * --eta was broken and counted down from 0. Now fixed.
4962 * Standard output and standard error are flushed after every job so if
4963 standard output does not end with a newline it will still be grouped
4964 with the rest of standard output.
4966 * --command, -c, --file, and -f are now removed as options. They were
4967 never used in practice.
4969 * GetOptionsFromArray rewritten to work with old Perl libraries.
4971 * The file COPYING now contains the GNU General Public License 3
4973 * Major rewrite to make the code more object oriented and easier to
4974 maintain in the future.
4979 * Using -j myfile the number of jobs can be changed while GNU Parallel
4980 is running simply by changing the content of myfile.
4982 * Implemented --profile to use different .parallel/config for
4983 different situations.
4985 * Ugly newlines in $PARALLEL and .parallel/config are no longer
4986 needed. Instead you have to use \ in front of special shell
4989 * --workdir puts the files transferred to remote machines in a
4990 specified directory.
4992 * $PARALLEL_PID is set to the process id of GNU Parallel.
4994 * $PARALLEL_SEQ is set to the sequence number of the job.
4996 * -v now only shows the command to run. Use -v -v to show the
4999 * Slow spawning error is now only a warning.
5001 * If stdin is a tty and input is read from stdin you now get a
5004 * GNU sql: \n and \x0a in arguments is replaced with newline.
5006 * Patch for Debian package and spelling mistakes. Thanks to Rogério
5007 Brito <rbrito at ime dot usp dot br>
5009 * Mac OS X Homebrew package. Thanks to Jonathan Palardy <jonathan dot
5010 palardy at gmail dot com>
5012 * FreeBSD port. Thanks to Chris Howey <howeyc at gmail dot com>
5014 * Pardus package. Thanks to Fethican Coşkuner
5015 <fethicanc at gmail dot com>
5017 * First review in Chinese. Thanks to 曾義峰:
5018 http://antbsd.twbbs.org/~ant/wordpress/?p=2876
5020 * First review in print:
5021 http://www.linux-magazine.com/Issues/2010 Nov 2010
5023 * First review in Spanish:
5024 http://www.muylinux.com/2010/10/18/gnu-parallel-computacion-paralela-a-golpe-de-comando
5026 * First review in Dutch thanks to Koen Vervloesem <koen at vervloesem
5028 http://techworld.nl/technologie/33493/gebruik-al-je-processorkernen-met-gnu-parallel.html
5030 * Blog review thanks to R. Tyler Croy <tyler at monkeypox dot org>:
5031 http://unethicalblogger.com/posts/2010/11/gnuparallel_changed_my_life
5033 * 5000 views of the intro video:
5034 http://www.youtube.com/watch?v=OpaiGYxkSuQ
5036 * As usual a bunch of bugfixes and more usage examples in the man
5039 * GNU Parallel was presented at FSCONS 2010-11-07:
5040 http://www.fscons.org/fs/gnu-parallel Hopefully the
5041 video will be online soon.
5046 * See GNU Parallel live at FSCONS 2010-11-07:
5047 http://www.fscons.org/fs/gnu-parallel
5049 * Untested Debian and xUbuntu packages available through OpenSUSE
5051 https://build.opensuse.org/package/show?package=parallel&project=home%3Atange
5053 * Using --retries a job will be retried on another computer if it
5054 fails. This is useful if some jobs fail for no apparent reason (such
5055 as network failure).
5057 * BSD xargs -o (open /dev/tty) is now default for the job running in
5058 foreground. Useful for interactive commands like:
5059 ls | parallel -Xuj1 vi
5061 * GNU sql now supports SQLite.
5063 * Renamed .dburl.aliases to .sql/aliases and /etc/sql/aliases.
5065 * GNU sql now support --list-tables
5067 * Alias for DBURL can contain '?query' part with %-quoting.
5072 * Using --shebang GNU Parallel can be used as the parser for a script.
5073 E.g: #!/usr/bin/parallel --shebang traceroute (followed by lines of
5076 * First community generated bugfixes
5078 * Alt Linux package of GNU Parallel. Thanks to Michael Shigorin <mike
5079 at altlinux dot org>
5081 * Sunfreeware package of GNU Parallel. Thanks to Steven M. Christensen
5082 <sunfreeware at gmail.com>
5084 * Untested CentOS, Fedora, Mandriva, RedHat, and SUSE packages
5085 available through OpenSUSE build service:
5086 https://build.opensuse.org/package/show?package=parallel&project=home%3Atange
5088 * Review of GNU Parallel. Thanks to Andrew McFague amcfague at wgen dot net
5089 http://www.andrew-mcfague.com/linux/utilities-linux/
5090 commands-every-serious-nix-user-should-know/#parallel
5092 * First 1000 views of the intro video
5094 * sql - a small script to access sql bases from the command line which
5095 is a handy companion to parallel --colsep
5100 * Counting semaphore functionality: start a job in the background. If
5101 N jobs are already running, wait for one to complete. Examples:
5102 sem 'sleep 2; echo foo'; sem 'sleep 1; echo bar'; sem --wait
5103 sem -j2 'sleep 2; echo foo'; sem -j2 'sleep 1; echo bar'; sem --wait
5105 * With --colsep a table can be used as input. Example:
5106 cat tab_sep_table | parallel --colsep '\t' echo col1 {1} col2 {2}
5108 * --trim can remove white space around arguments.
5110 * --sshloginfile '..' means use ~/.parallel/sshloginfile
5112 * Zero install package. Thanks to Tim Cuthbertson <tim3d dot junk at
5115 * OpenSUSE package. Thanks to Markus Ammer <mkmm at gmx-topmail dot
5118 * NixOS package. Thanks to Ludovic Courtès <ludo at gnu dot org>
5120 * Web review http://oentend.blogspot.com/2010/08/gnu-parallel.html
5121 Thanks to Pavel Nuzhdin <pnzhdin at gmail dot com>
5123 * Web review http://psung.blogspot.com/2010/08/gnu-parallel.html
5124 Thanks to Phil Sung <psung at alum dot mit dot edu>
5129 * Arguments can now be given on the command line. Example:
5130 parallel bzip2 ::: *.txt
5132 * xapply like functionality. Example:
5133 parallel diff {1} {2} :::: filelist1 filelist2
5134 parallel diff {1} {2} ">"{1.}-{2.}.diff :::: filelist1 filelist2
5136 * Arch Linux package. Thanks to Peter Simons <simons at cryp dot to>
5138 * Mandriva package. Thanks to Sandro Cazzaniga <kharec at mandriva dot
5141 * -L -l -n -s now implies -X unless -m is set
5146 * New video showing the new options.
5147 http://www.youtube.com/watch?v=OpaiGYxkSuQ or at
5148 http://tinyogg.com/watch/TORaR/ and http://tinyogg.com/watch/hfxKj/
5150 * 100% options complete with xargs. All options for xargs can now be
5151 used in GNU Parallel - even the more exotic.
5153 * --basefile for transferring basedata. When running jobs on remote
5154 computers --basefile will transfer files before the first jobs is
5155 run. It can be used to transfer data that remains the same for each
5156 job such as scripts or lookup tables.
5158 * --progress shows progress. To see how many jobs is running on each
5159 server use --progress. It can be turned on even after GNU Parallel
5162 * --eta shows estimated time left in seconds.
5164 * --halt-on-error stops if an error occurs. GNU Parallel will default
5165 to run all jobs - even if some of them fail. With --halt-on-error
5166 GNU Parallel can ignore errors, wait for the currently running jobs
5167 to finish, or stop immediately when an error occurs.
5172 * GNU Parallel now has support for running jobs on remote machines
5174 * Intro video http://www.youtube.com/watch?v=LlXDtd_pRaY
5175 http://openvideo.dailymotion.com/video/xdmqwz_gnu-parallel-script-processing-and_tech
5180 * GNU Parallel is now official GNU software