1 ;;; ob-core.el --- working with code blocks in org-mode
3 ;; Copyright (C) 2009-2015 Free Software Foundation, Inc.
5 ;; Authors: Eric Schulte
7 ;; Keywords: literate programming, reproducible research
8 ;; Homepage: http://orgmode.org
10 ;; This file is part of GNU Emacs.
12 ;; GNU Emacs is free software: you can redistribute it and/or modify
13 ;; it under the terms of the GNU General Public License as published by
14 ;; the Free Software Foundation, either version 3 of the License, or
15 ;; (at your option) any later version.
17 ;; GNU Emacs is distributed in the hope that it will be useful,
18 ;; but WITHOUT ANY WARRANTY; without even the implied warranty of
19 ;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
20 ;; GNU General Public License for more details.
22 ;; You should have received a copy of the GNU General Public License
23 ;; along with GNU Emacs. If not, see <http://www.gnu.org/licenses/>.
32 (defconst org-babel-exeext
33 (if (memq system-type
'(windows-nt cygwin
))
36 ;; dynamically scoped for tramp
37 (defvar org-babel-call-process-region-original nil
)
38 (defvar org-src-lang-modes
)
39 (defvar org-babel-library-of-babel
)
40 (declare-function outline-show-all
"outline" ())
41 (declare-function org-every
"org" (pred seq
))
42 (declare-function org-remove-indentation
"org" (code &optional n
))
43 (declare-function org-reduce
"org" (CL-FUNC CL-SEQ
&rest CL-KEYS
))
44 (declare-function org-mark-ring-push
"org" (&optional pos buffer
))
45 (declare-function tramp-compat-make-temp-file
"tramp-compat"
46 (filename &optional dir-flag
))
47 (declare-function tramp-dissect-file-name
"tramp" (name &optional nodefault
))
48 (declare-function tramp-file-name-user
"tramp" (vec))
49 (declare-function tramp-file-name-host
"tramp" (vec))
50 (declare-function with-parsed-tramp-file-name
"tramp" (filename var
&rest body
))
51 (declare-function org-icompleting-read
"org" (&rest args
))
52 (declare-function org-edit-src-code
"org-src" (&optional code edit-buffer-name
))
53 (declare-function org-edit-src-exit
"org-src" ())
54 (declare-function org-open-at-point
"org" (&optional in-emacs reference-buffer
))
55 (declare-function org-save-outline-visibility
"org-macs" (use-markers &rest body
))
56 (declare-function org-outline-overlay-data
"org" (&optional use-markers
))
57 (declare-function org-set-outline-overlay-data
"org" (data))
58 (declare-function org-narrow-to-subtree
"org" ())
59 (declare-function org-split-string
"org" (string &optional separators
))
60 (declare-function org-entry-get
"org"
61 (pom property
&optional inherit literal-nil
))
62 (declare-function org-make-options-regexp
"org" (kwds &optional extra
))
63 (declare-function org-do-remove-indentation
"org" (&optional n
))
64 (declare-function org-next-block
"org" (arg &optional backward block-regexp
))
65 (declare-function org-previous-block
"org" (arg &optional block-regexp
))
66 (declare-function org-show-context
"org" (&optional key
))
67 (declare-function org-at-table-p
"org" (&optional table-type
))
68 (declare-function org-cycle
"org" (&optional arg
))
69 (declare-function org-uniquify
"org" (list))
70 (declare-function org-current-level
"org" ())
71 (declare-function org-table-import
"org-table" (file arg
))
72 (declare-function org-add-hook
"org-compat"
73 (hook function
&optional append local
))
74 (declare-function org-table-align
"org-table" ())
75 (declare-function org-table-end
"org-table" (&optional table-type
))
76 (declare-function orgtbl-to-generic
"org-table" (table params
))
77 (declare-function orgtbl-to-orgtbl
"org-table" (table params
))
78 (declare-function org-babel-tangle-comment-links
"ob-tangle" (&optional info
))
79 (declare-function org-babel-lob-get-info
"ob-lob" nil
)
80 (declare-function org-babel-ref-split-args
"ob-ref" (arg-string))
81 (declare-function org-babel-ref-parse
"ob-ref" (assignment))
82 (declare-function org-babel-ref-resolve
"ob-ref" (ref))
83 (declare-function org-babel-ref-goto-headline-id
"ob-ref" (id))
84 (declare-function org-babel-ref-headline-body
"ob-ref" ())
85 (declare-function org-babel-lob-execute-maybe
"ob-lob" ())
86 (declare-function org-number-sequence
"org-compat" (from &optional to inc
))
87 (declare-function org-at-item-p
"org-list" ())
88 (declare-function org-list-parse-list
"org-list" (&optional delete
))
89 (declare-function org-list-to-generic
"org-list" (LIST PARAMS
))
90 (declare-function org-list-struct
"org-list" ())
91 (declare-function org-list-prevs-alist
"org-list" (struct))
92 (declare-function org-list-get-list-end
"org-list" (item struct prevs
))
93 (declare-function org-remove-if
"org" (predicate seq
))
94 (declare-function org-completing-read
"org" (&rest args
))
95 (declare-function org-escape-code-in-region
"org-src" (beg end
))
96 (declare-function org-unescape-code-in-string
"org-src" (s))
97 (declare-function org-table-to-lisp
"org-table" (&optional txt
))
98 (declare-function org-reverse-string
"org" (string))
99 (declare-function org-element-context
"org-element" (&optional element
))
100 (declare-function org-element-type
"org-element" (element))
101 (declare-function org-element-at-point
"org-element" ())
102 (declare-function org-element-property
"org-element" (property element
))
103 (declare-function org-every
"org" (pred seq
))
104 (declare-function org-macro-escape-arguments
"org-macro" (&rest args
))
106 (defgroup org-babel nil
107 "Code block evaluation and management in `org-mode' documents."
111 (defcustom org-confirm-babel-evaluate t
112 "Confirm before evaluation.
114 Require confirmation before interactively evaluating code
115 blocks in Org-mode buffers. The default value of this variable
116 is t, meaning confirmation is required for any code block
117 evaluation. This variable can be set to nil to inhibit any
118 future confirmation requests. This variable can also be set to a
119 function which takes two arguments the language of the code block
120 and the body of the code block. Such a function should then
121 return a non-nil value if the user should be prompted for
122 execution or nil if no prompt is required.
124 Warning: Disabling confirmation may result in accidental
125 evaluation of potentially harmful code. It may be advisable
126 remove code block execution from \\[org-ctrl-c-ctrl-c] \
127 as further protection
128 against accidental code block evaluation. The
129 `org-babel-no-eval-on-ctrl-c-ctrl-c' variable can be used to
130 remove code block execution from the \\[org-ctrl-c-ctrl-c] keybinding."
133 :type
'(choice boolean function
))
134 ;; don't allow this variable to be changed through file settings
135 (put 'org-confirm-babel-evaluate
'safe-local-variable
(lambda (x) (eq x t
)))
137 (defcustom org-babel-no-eval-on-ctrl-c-ctrl-c nil
139 Remove code block evaluation from the \\[org-ctrl-c-ctrl-c] key binding."
144 (defcustom org-babel-results-keyword
"RESULTS"
145 "Keyword used to name results generated by code blocks.
146 It should be \"RESULTS\". However any capitalization may be
150 :package-version
'(Org .
"8.0")
154 (eq (compare-strings "RESULTS" nil nil v nil nil t
)
157 (defcustom org-babel-noweb-wrap-start
"<<"
158 "String used to begin a noweb reference in a code block.
159 See also `org-babel-noweb-wrap-end'."
163 (defcustom org-babel-noweb-wrap-end
">>"
164 "String used to end a noweb reference in a code block.
165 See also `org-babel-noweb-wrap-start'."
169 (defcustom org-babel-inline-result-wrap
"=%s="
170 "Format string used to wrap inline results.
171 This string must include a \"%s\" which will be replaced by the results."
174 (put 'org-babel-inline-result-wrap
178 (string-match-p "%s" value
))))
180 (defun org-babel-noweb-wrap (&optional regexp
)
181 (concat org-babel-noweb-wrap-start
182 (or regexp
"\\([^ \t\n].+?[^ \t]\\|[^ \t\n]\\)")
183 org-babel-noweb-wrap-end
))
185 (defvar org-babel-src-name-regexp
186 "^[ \t]*#\\+name:[ \t]*"
187 "Regular expression used to match a source name line.")
189 (defvar org-babel-multi-line-header-regexp
190 "^[ \t]*#\\+headers?:[ \t]*\\([^\n]*\\)$"
191 "Regular expression used to match multi-line header arguments.")
193 (defvar org-babel-src-block-regexp
195 ;; (1) indentation (2) lang
196 "^\\([ \t]*\\)#\\+begin_src[ \t]+\\([^ \f\t\n\r\v]+\\)[ \t]*"
198 "\\([^\":\n]*\"[^\"\n*]*\"[^\":\n]*\\|[^\":\n]*\\)"
199 ;; (4) header arguments
202 "\\([^\000]*?\n\\)??[ \t]*#\\+end_src")
203 "Regexp used to identify code blocks.")
205 (defvar org-babel-inline-src-block-regexp
207 ;; (1) replacement target (2) lang
208 "\\(?:^\\|[^-[:alnum:]]?\\)\\(src_\\([^ \f\t\n\r\v[]+\\)"
209 ;; (3,4) (unused, headers)
210 "\\(\\|\\[[ \t]*\\(.*?\\)\\]\\)"
212 "{\\([^\f\n\r\v]+?\\)}\\)")
213 "Regexp used to identify inline src-blocks.")
215 (defun org-babel-get-header (params key
&optional others
)
216 "Select only header argument of type KEY from a list.
217 Optional argument OTHERS indicates that only the header that do
218 not match KEY should be returned."
221 (lambda (p) (when (funcall (if others
#'not
#'identity
) (eq (car p
) key
)) p
))
224 (defun org-babel-get-inline-src-block-matches ()
225 "Set match data if within body of an inline source block.
226 Returns non-nil if match-data set"
228 (let ((datum (org-element-context)))
229 (when (eq (org-element-type datum
) 'inline-src-block
)
230 (goto-char (org-element-property :begin datum
))
231 (when (looking-at org-babel-inline-src-block-regexp
)
234 (defvar org-babel-inline-lob-one-liner-regexp
)
235 (defun org-babel-get-lob-one-liner-matches ()
236 "Set match data if on line of an lob one liner.
237 Returns non-nil if match-data set"
239 (let ((datum (org-element-context)))
240 (when (eq (org-element-type datum
) 'inline-babel-call
)
241 (goto-char (org-element-property :begin datum
))))
242 (if (looking-at org-babel-inline-lob-one-liner-regexp
)
246 (defun org-babel-get-src-block-info (&optional light
)
247 "Get information on the current source block.
249 Optional argument LIGHT does not resolve remote variable
250 references; a process which could likely result in the execution
251 of other code blocks.
254 (language body header-arguments-alist switches name indent block-head)."
255 (let ((case-fold-search t
) head info name indent
)
257 (if (setq head
(org-babel-where-is-src-block-head))
260 (setq info
(org-babel-parse-src-block-match))
261 (setq indent
(car (last info
)))
262 (setq info
(butlast info
))
263 (while (and (forward-line -
1)
264 (looking-at org-babel-multi-line-header-regexp
))
266 (org-babel-merge-params
268 (org-babel-parse-header-arguments (match-string 1)))))
269 (when (looking-at (org-babel-named-src-block-regexp-for-name))
270 (setq name
(org-match-string-no-properties 9))))
271 ;; inline source block
272 (when (org-babel-get-inline-src-block-matches)
273 (setq head
(match-beginning 0))
274 (setq info
(org-babel-parse-inline-src-block-match))))
275 ;; resolve variable references and add summary parameters
276 (when (and info
(not light
))
277 (setf (nth 2 info
) (org-babel-process-params (nth 2 info
))))
279 (setf (nth 2 info
) (org-babel-generate-file-param name
(nth 2 info
))))
280 (when info
(append info
(list name indent head
)))))
282 (defvar org-babel-exp-reference-buffer nil
283 "Buffer containing original contents of the exported buffer.
284 This is used by Babel to resolve references in source blocks.
285 Its value is dynamically bound during export.")
287 (defmacro org-babel-check-confirm-evaluate
(info &rest body
)
288 "Evaluate BODY with special execution confirmation variables set.
290 Specifically; NOEVAL will indicate if evaluation is allowed,
291 QUERY will indicate if a user query is required, CODE-BLOCK will
292 hold the language of the code block, and BLOCK-NAME will hold the
293 name of the code block."
294 (declare (indent defun
))
296 (lang block-body headers name head eval eval-no export eval-no-export
)
297 `(let* ((,lang
(nth 0 ,info
))
298 (,block-body
(nth 1 ,info
))
299 (,headers
(nth 2 ,info
))
300 (,name
(nth 4 ,info
))
301 (,head
(nth 6 ,info
))
302 (,eval
(or (cdr (assoc :eval
,headers
))
303 (when (assoc :noeval
,headers
) "no")))
304 (,eval-no
(or (equal ,eval
"no")
305 (equal ,eval
"never")))
306 (,export org-babel-exp-reference-buffer
)
307 (,eval-no-export
(and ,export
(or (equal ,eval
"no-export")
308 (equal ,eval
"never-export"))))
309 (noeval (or ,eval-no
,eval-no-export
))
310 (query (or (equal ,eval
"query")
311 (and ,export
(equal ,eval
"query-export"))
312 (if (functionp org-confirm-babel-evaluate
)
315 (funcall org-confirm-babel-evaluate
317 org-confirm-babel-evaluate
)))
318 (code-block (if ,info
(format " %s " ,lang
) " "))
319 (block-name (if ,name
(format " (%s) " ,name
) " ")))
322 (defsubst org-babel-check-evaluate
(info)
323 "Check if code block INFO should be evaluated.
324 Do not query the user."
325 (org-babel-check-confirm-evaluate info
327 (message "Evaluation of this%scode-block%sis disabled."
328 code-block block-name
)))))
330 ;; dynamically scoped for asynchronous export
331 (defvar org-babel-confirm-evaluate-answer-no
)
333 (defsubst org-babel-confirm-evaluate
(info)
334 "Confirm evaluation of the code block INFO.
336 If the variable `org-babel-confirm-evaluate-answer-no' is bound
337 to a non-nil value, auto-answer with \"no\".
339 This query can also be suppressed by setting the value of
340 `org-confirm-babel-evaluate' to nil, in which case all future
341 interactive code block evaluations will proceed without any
342 confirmation from the user.
344 Note disabling confirmation may result in accidental evaluation
345 of potentially harmful code."
346 (org-babel-check-confirm-evaluate info
349 (and (not (org-bound-and-true-p
350 org-babel-confirm-evaluate-answer-no
))
352 (format "Evaluate this%scode block%son your system? "
353 code-block block-name
)))
354 (message "Evaluation of this%scode-block%sis aborted."
355 code-block block-name
))))))
358 (defun org-babel-execute-safely-maybe ()
359 (unless org-babel-no-eval-on-ctrl-c-ctrl-c
360 (org-babel-execute-maybe)))
362 (add-hook 'org-ctrl-c-ctrl-c-hook
'org-babel-execute-safely-maybe
)
365 (defun org-babel-execute-maybe ()
367 (or (org-babel-execute-src-block-maybe)
368 (org-babel-lob-execute-maybe)))
370 (defmacro org-babel-when-in-src-block
(&rest body
)
371 "Execute BODY if point is in a source block and return t.
373 Otherwise do nothing and return nil."
374 `(if (or (org-babel-where-is-src-block-head)
375 (org-babel-get-inline-src-block-matches))
381 (defun org-babel-execute-src-block-maybe ()
382 "Conditionally execute a source block.
383 Detect if this is context for a Babel src-block and if so
384 then run `org-babel-execute-src-block'."
386 (org-babel-when-in-src-block
387 (org-babel-eval-wipe-error-buffer)
388 (org-babel-execute-src-block current-prefix-arg
)))
391 (defun org-babel-view-src-block-info ()
392 "Display information on the current source block.
393 This includes header arguments, language and name, and is largely
394 a window into the `org-babel-get-src-block-info' function."
396 (let ((info (org-babel-get-src-block-info 'light
))
397 (full (lambda (it) (> (length it
) 0)))
398 (printf (lambda (fmt &rest args
) (princ (apply #'format fmt args
)))))
400 (with-help-window (help-buffer)
401 (let ((name (nth 4 info
))
403 (switches (nth 3 info
))
404 (header-args (nth 2 info
)))
405 (when name
(funcall printf
"Name: %s\n" name
))
406 (when lang
(funcall printf
"Lang: %s\n" lang
))
407 (funcall printf
"Properties:\n")
408 (funcall printf
"\t:header-args \t%s\n" (org-entry-get (point) "header-args" t
))
409 (funcall printf
"\t:header-args:%s \t%s\n" lang
(org-entry-get (point) (concat "header-args:" lang
) t
))
411 (when (funcall full switches
) (funcall printf
"Switches: %s\n" switches
))
412 (funcall printf
"Header Arguments:\n")
413 (dolist (pair (sort header-args
414 (lambda (a b
) (string< (symbol-name (car a
))
415 (symbol-name (car b
))))))
416 (when (funcall full
(format "%s" (cdr pair
)))
417 (funcall printf
"\t%S%s\t%s\n"
419 (if (> (length (format "%S" (car pair
))) 7) "" "\t")
423 (defun org-babel-expand-src-block-maybe ()
424 "Conditionally expand a source block.
425 Detect if this is context for a org-babel src-block and if so
426 then run `org-babel-expand-src-block'."
428 (org-babel-when-in-src-block
429 (org-babel-expand-src-block current-prefix-arg
)))
432 (defun org-babel-load-in-session-maybe ()
433 "Conditionally load a source block in a session.
434 Detect if this is context for a org-babel src-block and if so
435 then run `org-babel-load-in-session'."
437 (org-babel-when-in-src-block
438 (org-babel-load-in-session current-prefix-arg
)))
440 (add-hook 'org-metaup-hook
'org-babel-load-in-session-maybe
)
443 (defun org-babel-pop-to-session-maybe ()
444 "Conditionally pop to a session.
445 Detect if this is context for a org-babel src-block and if so
446 then run `org-babel-switch-to-session'."
448 (org-babel-when-in-src-block
449 (org-babel-switch-to-session current-prefix-arg
)))
451 (add-hook 'org-metadown-hook
'org-babel-pop-to-session-maybe
)
453 (defconst org-babel-common-header-args-w-values
454 '((cache .
((no yes
)))
456 (colnames .
((nil no yes
)))
457 (comments .
((no link yes org both noweb
)))
459 (eval .
((yes no no-export strip-export never-export eval never
461 (exports .
((code results both none
)))
466 (hlines .
((no yes
)))
467 (mkdirp .
((yes no
)))
470 (noweb .
((yes no tangle no-export strip-export
)))
474 (padline .
((yes no
)))
477 (results .
((file list vector table scalar verbatim
)
478 (raw html latex org code pp drawer
)
479 (replace silent none append prepend
)
481 (rownames .
((no yes
)))
485 (tangle .
((tangle yes no
:any
)))
486 (tangle-mode .
((#o755
#o555
#o444
:any
)))
490 (defconst org-babel-header-arg-names
491 (mapcar #'car org-babel-common-header-args-w-values
)
492 "Common header arguments used by org-babel.
493 Note that individual languages may define their own language
494 specific header arguments as well.")
496 (defconst org-babel-safe-header-args
497 '(:cache
:colnames
:comments
:exports
:epilogue
:hlines
:noeval
498 :noweb
:noweb-ref
:noweb-sep
:padline
:prologue
:rownames
499 :sep
:session
:tangle
:wrap
500 (:eval .
("never" "query"))
501 (:results .
(lambda (str) (not (string-match "file" str
)))))
502 "A list of safe header arguments for babel source blocks.
504 The list can have entries of the following forms:
505 - :ARG -> :ARG is always a safe header arg
506 - (:ARG . (VAL1 VAL2 ...)) -> :ARG is safe as a header arg if it is
507 `equal' to one of the VALs.
508 - (:ARG . FN) -> :ARG is safe as a header arg if the function FN
509 returns non-nil. FN is passed one
510 argument, the value of the header arg
513 (defmacro org-babel-header-args-safe-fn
(safe-list)
514 "Return a function that determines whether a list of header args are safe.
517 \(put \\='org-babel-default-header-args \\='safe-local-variable
518 (org-babel-header-args-safe-p org-babel-safe-header-args)
520 This allows org-babel languages to extend the list of safe values for
521 their `org-babel-default-header-args:foo' variable.
523 For the format of SAFE-LIST, see `org-babel-safe-header-args'."
529 (org-babel-one-header-arg-safe-p pair
,safe-list
)))
532 (defvar org-babel-default-header-args
533 '((:session .
"none") (:results .
"replace") (:exports .
"code")
534 (:cache .
"no") (:noweb .
"no") (:hlines .
"no") (:tangle .
"no"))
535 "Default arguments to use when evaluating a source block.")
536 (put 'org-babel-default-header-args
'safe-local-variable
537 (org-babel-header-args-safe-fn org-babel-safe-header-args
))
539 (defvar org-babel-default-inline-header-args
540 '((:session .
"none") (:results .
"replace")
541 (:exports .
"results") (:hlines .
"yes"))
542 "Default arguments to use when evaluating an inline source block.")
543 (put 'org-babel-default-inline-header-args
'safe-local-variable
544 (org-babel-header-args-safe-fn org-babel-safe-header-args
))
546 (defvar org-babel-data-names
'("tblname" "results" "name"))
548 (defvar org-babel-result-regexp
549 (concat "^[ \t]*#\\+"
550 (regexp-opt org-babel-data-names t
)
552 ;; FIXME The string below is `org-ts-regexp'
553 "<\\([0-9]\\{4\\}-[0-9]\\{2\\}-[0-9]\\{2\\} ?[^\r\n>]*?\\)>"
554 " \\)?\\([[:alnum:]]+\\)\\]\\)?\\:[ \t]*")
555 "Regular expression used to match result lines.
556 If the results are associated with a hash key then the hash will
557 be saved in the second match data.")
559 (defvar org-babel-result-w-name-regexp
560 (concat org-babel-result-regexp
561 "\\([^ ()\f\t\n\r\v]+\\)\\((\\(.*\\))\\|\\)"))
563 (defvar org-babel-min-lines-for-block-output
10
564 "The minimum number of lines for block output.
565 If number of lines of output is equal to or exceeds this
566 value, the output is placed in a #+begin_example...#+end_example
567 block. Otherwise the output is marked as literal by inserting
568 colons at the starts of the lines. This variable only takes
569 effect if the :results output option is in effect.")
571 (defvar org-babel-noweb-error-all-langs nil
572 "Raise errors when noweb references don't resolve.
573 Also see `org-babel-noweb-error-langs' to control noweb errors on
574 a language by language bases.")
576 (defvar org-babel-noweb-error-langs nil
577 "Languages for which Babel will raise literate programming errors.
578 List of languages for which errors should be raised when the
579 source code block satisfying a noweb reference in this language
580 can not be resolved. Also see `org-babel-noweb-error-all-langs'
581 to raise errors for all languages.")
583 (defvar org-babel-hash-show
4
584 "Number of initial characters to show of a hidden results hash.")
586 (defvar org-babel-hash-show-time nil
587 "Non-nil means show the time the code block was evaluated in the result hash.")
589 (defvar org-babel-after-execute-hook nil
590 "Hook for functions to be called after `org-babel-execute-src-block'")
592 (defun org-babel-named-src-block-regexp-for-name (&optional name
)
593 "This generates a regexp used to match a src block named NAME.
594 If NAME is nil, match any name. Matched name is then put in
595 match group 9. Other match groups are defined in
596 `org-babel-src-block-regexp'."
597 (concat org-babel-src-name-regexp
598 (concat (if name
(regexp-quote name
) "\\(?9:.*?\\)") "[ \t]*" )
599 "\\(?:\n[ \t]*#\\+\\S-+:.*\\)*?"
601 (substring org-babel-src-block-regexp
1)))
603 (defun org-babel-named-data-regexp-for-name (name)
604 "This generates a regexp used to match data named NAME."
605 (concat org-babel-result-regexp
(regexp-quote name
) "\\([ \t]\\|$\\)"))
608 (defvar call-process-region
)
609 (defvar org-babel-current-src-block-location nil
610 "Marker pointing to the src block currently being executed.
611 This may also point to a call line or an inline code block. If
612 multiple blocks are being executed (e.g., in chained execution
613 through use of the :var header argument) this marker points to
614 the outer-most code block.")
617 (defun org-babel-execute-src-block (&optional arg info params
)
618 "Execute the current source code block.
619 Insert the results of execution into the buffer. Source code
620 execution and the collection and formatting of results can be
621 controlled through a variety of header arguments.
623 With prefix argument ARG, force re-execution even if an existing
624 result cached in the buffer would otherwise have been returned.
626 Optionally supply a value for INFO in the form returned by
627 `org-babel-get-src-block-info'.
629 Optionally supply a value for PARAMS which will be merged with
630 the header arguments specified at the front of the source code
633 (let* ((org-babel-current-src-block-location
634 (or org-babel-current-src-block-location
636 (org-babel-where-is-src-block-head)
638 (and (org-babel-get-inline-src-block-matches)
639 (match-beginning 0))))
642 (org-babel-get-src-block-info)))
643 (merged-params (org-babel-merge-params (nth 2 info
) params
)))
644 (when (org-babel-check-evaluate
645 (let ((i info
)) (setf (nth 2 i
) merged-params
) i
))
646 (let* ((params (if params
647 (org-babel-process-params merged-params
)
649 (cachep (and (not arg
) (cdr (assoc :cache params
))
650 (string= "yes" (cdr (assoc :cache params
)))))
651 (new-hash (when cachep
(org-babel-sha1-hash info
)))
652 (old-hash (when cachep
(org-babel-current-result-hash)))
653 (cache-current-p (and (not arg
) new-hash
654 (equal new-hash old-hash
))))
657 (save-excursion ;; return cached result
658 (goto-char (org-babel-where-is-src-block-result nil info
))
660 (skip-chars-forward " \t")
661 (let ((result (org-babel-read-result)))
662 (message (replace-regexp-in-string
663 "%" "%%" (format "%S" result
))) result
)))
664 ((org-babel-confirm-evaluate
665 (let ((i info
)) (setf (nth 2 i
) merged-params
) i
))
666 (let* ((lang (nth 0 info
))
667 (result-params (cdr (assoc :result-params params
)))
668 (body (setf (nth 1 info
)
669 (if (org-babel-noweb-p params
:eval
)
670 (org-babel-expand-noweb-references info
)
672 (dir (cdr (assoc :dir params
)))
674 (or (and dir
(file-name-as-directory (expand-file-name dir
)))
676 (org-babel-call-process-region-original ;; for tramp handler
677 (or (org-bound-and-true-p
678 org-babel-call-process-region-original
)
679 (symbol-function 'call-process-region
)))
680 (indent (nth 5 info
))
683 (let ((call-process-region
685 (apply 'org-babel-tramp-handle-call-process-region
689 (let ((f (intern (concat "org-babel-execute:" f
))))
690 (when (fboundp f
) f
)))))
692 (or (funcall lang-check lang
)
695 (cdr (assoc lang org-src-lang-modes
))))
696 (error "No org-babel-execute function for %s!"
698 (message "executing %s code block%s..."
700 (if (nth 4 info
) (format " (%s)" (nth 4 info
)) ""))
701 (if (member "none" result-params
)
703 (funcall cmd body params
)
704 (message "result silenced")
707 (let ((result (funcall cmd body params
)))
708 (if (and (eq (cdr (assoc :result-type params
))
710 (or (member "vector" result-params
)
711 (member "table" result-params
))
712 (not (listp result
)))
713 (list (list result
)) result
)))
714 ;; If non-empty result and :file then write to :file.
715 (when (cdr (assoc :file params
))
717 (with-temp-file (cdr (assoc :file params
))
719 (org-babel-format-result
720 result
(cdr (assoc :sep
(nth 2 info
)))))))
721 (setq result
(cdr (assoc :file params
))))
722 ;; Possibly perform post process provided its appropriate.
723 (when (cdr (assoc :post params
))
724 (let ((*this
* (if (cdr (assoc :file params
))
725 (org-babel-result-to-file
726 (cdr (assoc :file params
))
727 (when (assoc :file-desc params
)
728 (or (cdr (assoc :file-desc params
))
731 (setq result
(org-babel-ref-resolve
732 (cdr (assoc :post params
))))
733 (when (cdr (assoc :file params
))
735 (remove "file" result-params
)))))
736 (org-babel-insert-result
737 result result-params info new-hash indent lang
))
738 (run-hooks 'org-babel-after-execute-hook
)
740 (setq call-process-region
741 'org-babel-call-process-region-original
)))))))))
743 (defun org-babel-expand-body:generic
(body params
&optional var-lines
)
744 "Expand BODY with PARAMS.
745 Expand a block of code with org-babel according to its header
746 arguments. This generic implementation of body expansion is
747 called for languages which have not defined their own specific
748 org-babel-expand-body:lang function."
749 (let ((pro (cdr (assoc :prologue params
)))
750 (epi (cdr (assoc :epilogue params
))))
751 (mapconcat #'identity
752 (append (when pro
(list pro
))
755 (when epi
(list epi
)))
759 (defun org-babel-expand-src-block (&optional arg info params
)
760 "Expand the current source code block.
761 Expand according to the source code block's header
762 arguments and pop open the results in a preview buffer."
764 (let* ((info (or info
(org-babel-get-src-block-info)))
766 (params (setf (nth 2 info
)
767 (sort (org-babel-merge-params (nth 2 info
) params
)
768 (lambda (el1 el2
) (string< (symbol-name (car el1
))
769 (symbol-name (car el2
)))))))
770 (body (setf (nth 1 info
)
771 (if (org-babel-noweb-p params
:eval
)
772 (org-babel-expand-noweb-references info
) (nth 1 info
))))
773 (expand-cmd (intern (concat "org-babel-expand-body:" lang
)))
774 (assignments-cmd (intern (concat "org-babel-variable-assignments:"
777 (if (fboundp expand-cmd
) (funcall expand-cmd body params
)
778 (org-babel-expand-body:generic
779 body params
(and (fboundp assignments-cmd
)
780 (funcall assignments-cmd params
))))))
781 (if (org-called-interactively-p 'any
)
783 expanded
(concat "*Org-Babel Preview " (buffer-name) "[ " lang
" ]*"))
786 (defun org-babel-edit-distance (s1 s2
)
787 "Return the edit (levenshtein) distance between strings S1 S2."
788 (let* ((l1 (length s1
))
790 (dist (vconcat (mapcar (lambda (_) (make-vector (1+ l2
) nil
))
791 (number-sequence 1 (1+ l1
)))))
792 (in (lambda (i j
) (aref (aref dist i
) j
))))
793 (setf (aref (aref dist
0) 0) 0)
794 (dolist (j (number-sequence 1 l2
))
795 (setf (aref (aref dist
0) j
) j
))
796 (dolist (i (number-sequence 1 l1
))
797 (setf (aref (aref dist i
) 0) i
)
798 (dolist (j (number-sequence 1 l2
))
799 (setf (aref (aref dist i
) j
)
801 (1+ (funcall in
(1- i
) j
))
802 (1+ (funcall in i
(1- j
)))
803 (+ (if (equal (aref s1
(1- i
)) (aref s2
(1- j
))) 0 1)
804 (funcall in
(1- i
) (1- j
)))))))
807 (defun org-babel-combine-header-arg-lists (original &rest others
)
808 "Combine a number of lists of header argument names and arguments."
809 (let ((results (copy-sequence original
)))
810 (dolist (new-list others
)
811 (dolist (arg-pair new-list
)
812 (let ((header (car arg-pair
))
813 (args (cdr arg-pair
)))
815 (cons arg-pair
(org-remove-if
816 (lambda (pair) (equal header
(car pair
)))
821 (defun org-babel-check-src-block ()
822 "Check for misspelled header arguments in the current code block."
824 ;; TODO: report malformed code block
825 ;; TODO: report incompatible combinations of header arguments
826 ;; TODO: report uninitialized variables
827 (let ((too-close 2) ;; <- control closeness to report potential match
828 (names (mapcar #'symbol-name org-babel-header-arg-names
)))
829 (dolist (header (mapcar (lambda (arg) (substring (symbol-name (car arg
)) 1))
830 (and (org-babel-where-is-src-block-head)
831 (org-babel-parse-header-arguments
833 (match-string 4))))))
835 (when (and (not (string= header name
))
836 (<= (org-babel-edit-distance header name
) too-close
)
837 (not (member header names
)))
838 (error "Supplied header \"%S\" is suspiciously close to \"%S\""
840 (message "No suspicious header arguments found.")))
843 (defun org-babel-insert-header-arg (&optional header-arg value
)
844 "Insert a header argument selecting from lists of common args and values."
846 (let* ((info (org-babel-get-src-block-info 'light
))
849 (lang-headers (intern (concat "org-babel-header-args:" lang
)))
850 (headers (org-babel-combine-header-arg-lists
851 org-babel-common-header-args-w-values
852 (when (boundp lang-headers
) (eval lang-headers
))))
853 (header-arg (or header-arg
854 (org-icompleting-read
857 (lambda (header-spec) (symbol-name (car header-spec
)))
859 (vals (cdr (assoc (intern header-arg
) headers
)))
863 (read-from-minibuffer "value: "))
867 (let ((arg (org-icompleting-read
870 (mapcar #'symbol-name group
)))))
871 (if (and arg
(not (string= "default" arg
)))
877 (goto-char (point-at-eol))
878 (unless (= (char-before (point)) ?\
) (insert " "))
879 (insert ":" header-arg
) (when value
(insert " " value
)))))
881 ;; Add support for completing-read insertion of header arguments after ":"
882 (defun org-babel-header-arg-expand ()
883 "Call `org-babel-enter-header-arg-w-completion' in appropriate contexts."
884 (when (and (equal (char-before) ?\
:) (org-babel-where-is-src-block-head))
885 (org-babel-enter-header-arg-w-completion (match-string 2))))
887 (defun org-babel-enter-header-arg-w-completion (&optional lang
)
888 "Insert header argument appropriate for LANG with completion."
889 (let* ((lang-headers-var (intern (concat "org-babel-header-args:" lang
)))
890 (lang-headers (when (boundp lang-headers-var
) (eval lang-headers-var
)))
891 (headers-w-values (org-babel-combine-header-arg-lists
892 org-babel-common-header-args-w-values lang-headers
))
893 (headers (mapcar #'symbol-name
(mapcar #'car headers-w-values
)))
894 (header (org-completing-read "Header Arg: " headers
))
895 (args (cdr (assoc (intern header
) headers-w-values
)))
896 (arg (when (and args
(listp args
))
898 (format "%s: " header
)
899 (mapcar #'symbol-name
(apply #'append args
))))))
900 (insert (concat header
" " (or arg
"")))
903 (add-hook 'org-tab-first-hook
'org-babel-header-arg-expand
)
906 (defun org-babel-load-in-session (&optional arg info
)
907 "Load the body of the current source-code block.
908 Evaluate the header arguments for the source block before
909 entering the session. After loading the body this pops open the
912 (let* ((info (or info
(org-babel-get-src-block-info)))
914 (params (nth 2 info
))
916 (user-error "No src code block at point")
918 (if (org-babel-noweb-p params
:eval
)
919 (org-babel-expand-noweb-references info
)
921 (session (cdr (assoc :session params
)))
922 (dir (cdr (assoc :dir params
)))
924 (or (and dir
(file-name-as-directory dir
)) default-directory
))
925 (cmd (intern (concat "org-babel-load-session:" lang
))))
926 (unless (fboundp cmd
)
927 (error "No org-babel-load-session function for %s!" lang
))
928 (pop-to-buffer (funcall cmd session body params
))
932 (defun org-babel-initiate-session (&optional arg info
)
933 "Initiate session for current code block.
934 If called with a prefix argument then resolve any variable
935 references in the header arguments and assign these variables in
936 the session. Copy the body of the code block to the kill ring."
938 (let* ((info (or info
(org-babel-get-src-block-info (not arg
))))
941 (params (nth 2 info
))
942 (session (cdr (assoc :session params
)))
943 (dir (cdr (assoc :dir params
)))
945 (or (and dir
(file-name-as-directory dir
)) default-directory
))
946 (init-cmd (intern (format "org-babel-%s-initiate-session" lang
)))
947 (prep-cmd (intern (concat "org-babel-prep-session:" lang
))))
948 (if (and (stringp session
) (string= session
"none"))
949 (error "This block is not using a session!"))
950 (unless (fboundp init-cmd
)
951 (error "No org-babel-initiate-session function for %s!" lang
))
952 (with-temp-buffer (insert (org-babel-trim body
))
953 (copy-region-as-kill (point-min) (point-max)))
955 (unless (fboundp prep-cmd
)
956 (error "No org-babel-prep-session function for %s!" lang
))
957 (funcall prep-cmd session params
))
958 (funcall init-cmd session params
)))
961 (defun org-babel-switch-to-session (&optional arg info
)
962 "Switch to the session of the current code block.
963 Uses `org-babel-initiate-session' to start the session. If called
964 with a prefix argument then this is passed on to
965 `org-babel-initiate-session'."
967 (pop-to-buffer (org-babel-initiate-session arg info
))
970 (defalias 'org-babel-pop-to-session
'org-babel-switch-to-session
)
972 (defvar org-src-window-setup
)
975 (defun org-babel-switch-to-session-with-code (&optional arg info
)
976 "Switch to code buffer and display session."
980 (let ((other-window-buffer (window-buffer (next-window))))
981 (set-window-buffer (next-window) (current-buffer))
982 (set-window-buffer (selected-window) other-window-buffer
))
984 (info (org-babel-get-src-block-info))
985 (org-src-window-setup 'reorganize-frame
))
987 (org-babel-switch-to-session arg info
))
989 (funcall swap-windows
)))
992 (defmacro org-babel-do-in-edit-buffer
(&rest body
)
993 "Evaluate BODY in edit buffer if there is a code block at point.
994 Return t if a code block was found at point, nil otherwise."
995 `(let ((org-src-window-setup 'switch-invisibly
))
996 (when (and (org-babel-where-is-src-block-head)
998 (unwind-protect (progn ,@body
)
1001 (def-edebug-spec org-babel-do-in-edit-buffer
(body))
1003 (defun org-babel-do-key-sequence-in-edit-buffer (key)
1004 "Read key sequence and execute the command in edit buffer.
1005 Enter a key sequence to be executed in the language major-mode
1006 edit buffer. For example, TAB will alter the contents of the
1007 Org-mode code block according to the effect of TAB in the
1008 language major-mode buffer. For languages that support
1009 interactive sessions, this can be used to send code from the Org
1010 buffer to the session for evaluation using the native major-mode
1011 evaluation mechanisms."
1012 (interactive "kEnter key-sequence to execute in edit buffer: ")
1013 (org-babel-do-in-edit-buffer
1015 (key-binding (or key
(read-key-sequence nil
))))))
1017 (defvar org-bracket-link-regexp
)
1019 (defun org-babel-active-location-p ()
1020 (memq (org-element-type (save-match-data (org-element-context)))
1021 '(babel-call inline-babel-call inline-src-block src-block
)))
1024 (defun org-babel-open-src-block-result (&optional re-run
)
1025 "If `point' is on a src block then open the results of the
1026 source code block, otherwise return nil. With optional prefix
1027 argument RE-RUN the source-code block is evaluated even if
1028 results already exist."
1030 (let ((info (org-babel-get-src-block-info 'light
)))
1033 ;; go to the results, if there aren't any then run the block
1034 (goto-char (or (and (not re-run
) (org-babel-where-is-src-block-result))
1035 (progn (org-babel-execute-src-block)
1036 (org-babel-where-is-src-block-result))))
1038 (while (looking-at "[\n\r\t\f ]") (forward-char 1))
1040 (if (looking-at org-bracket-link-regexp
)
1043 (let ((r (org-babel-format-result
1044 (org-babel-read-result) (cdr (assoc :sep
(nth 2 info
))))))
1045 (pop-to-buffer (get-buffer-create "*Org-Babel Results*"))
1046 (delete-region (point-min) (point-max))
1051 (defmacro org-babel-map-src-blocks
(file &rest body
)
1052 "Evaluate BODY forms on each source-block in FILE.
1053 If FILE is nil evaluate BODY forms on source blocks in current
1054 buffer. During evaluation of BODY the following local variables
1055 are set relative to the currently matched code block.
1057 full-block ------- string holding the entirety of the code block
1058 beg-block -------- point at the beginning of the code block
1059 end-block -------- point at the end of the matched code block
1060 lang ------------- string holding the language of the code block
1061 beg-lang --------- point at the beginning of the lang
1062 end-lang --------- point at the end of the lang
1063 switches --------- string holding the switches
1064 beg-switches ----- point at the beginning of the switches
1065 end-switches ----- point at the end of the switches
1066 header-args ------ string holding the header-args
1067 beg-header-args -- point at the beginning of the header-args
1068 end-header-args -- point at the end of the header-args
1069 body ------------- string holding the body of the code block
1070 beg-body --------- point at the beginning of the body
1071 end-body --------- point at the end of the body"
1072 (declare (indent 1))
1073 (let ((tempvar (make-symbol "file")))
1074 `(let* ((case-fold-search t
)
1076 (visited-p (or (null ,tempvar
)
1077 (get-file-buffer (expand-file-name ,tempvar
))))
1078 (point (point)) to-be-removed
)
1079 (save-window-excursion
1080 (when ,tempvar
(find-file ,tempvar
))
1081 (setq to-be-removed
(current-buffer))
1082 (goto-char (point-min))
1083 (while (re-search-forward org-babel-src-block-regexp nil t
)
1084 (when (org-babel-active-location-p)
1085 (goto-char (match-beginning 0))
1086 (let ((full-block (match-string 0))
1087 (beg-block (match-beginning 0))
1088 (end-block (match-end 0))
1089 (lang (match-string 2))
1090 (beg-lang (match-beginning 2))
1091 (end-lang (match-end 2))
1092 (switches (match-string 3))
1093 (beg-switches (match-beginning 3))
1094 (end-switches (match-end 3))
1095 (header-args (match-string 4))
1096 (beg-header-args (match-beginning 4))
1097 (end-header-args (match-end 4))
1098 (body (match-string 5))
1099 (beg-body (match-beginning 5))
1100 (end-body (match-end 5)))
1102 (goto-char end-block
)))))
1103 (unless visited-p
(kill-buffer to-be-removed
))
1104 (goto-char point
))))
1105 (def-edebug-spec org-babel-map-src-blocks
(form body
))
1108 (defmacro org-babel-map-inline-src-blocks
(file &rest body
)
1109 "Evaluate BODY forms on each inline source-block in FILE.
1110 If FILE is nil evaluate BODY forms on source blocks in current
1112 (declare (indent 1))
1113 (let ((tempvar (make-symbol "file")))
1114 `(let* ((case-fold-search t
)
1116 (visited-p (or (null ,tempvar
)
1117 (get-file-buffer (expand-file-name ,tempvar
))))
1118 (point (point)) to-be-removed
)
1119 (save-window-excursion
1120 (when ,tempvar
(find-file ,tempvar
))
1121 (setq to-be-removed
(current-buffer))
1122 (goto-char (point-min))
1123 (while (re-search-forward org-babel-inline-src-block-regexp nil t
)
1124 (when (org-babel-active-location-p)
1125 (goto-char (match-beginning 1))
1126 (save-match-data ,@body
))
1127 (goto-char (match-end 0))))
1128 (unless visited-p
(kill-buffer to-be-removed
))
1129 (goto-char point
))))
1130 (def-edebug-spec org-babel-map-inline-src-blocks
(form body
))
1132 (defvar org-babel-lob-one-liner-regexp
)
1135 (defmacro org-babel-map-call-lines
(file &rest body
)
1136 "Evaluate BODY forms on each call line in FILE.
1137 If FILE is nil evaluate BODY forms on source blocks in current
1139 (declare (indent 1))
1140 (let ((tempvar (make-symbol "file")))
1141 `(let* ((,tempvar
,file
)
1142 (visited-p (or (null ,tempvar
)
1143 (get-file-buffer (expand-file-name ,tempvar
))))
1144 (point (point)) to-be-removed
)
1145 (save-window-excursion
1146 (when ,tempvar
(find-file ,tempvar
))
1147 (setq to-be-removed
(current-buffer))
1148 (goto-char (point-min))
1149 (while (re-search-forward org-babel-lob-one-liner-regexp nil t
)
1150 (when (org-babel-active-location-p)
1151 (goto-char (match-beginning 1))
1152 (save-match-data ,@body
))
1153 (goto-char (match-end 0))))
1154 (unless visited-p
(kill-buffer to-be-removed
))
1155 (goto-char point
))))
1156 (def-edebug-spec org-babel-map-call-lines
(form body
))
1159 (defmacro org-babel-map-executables
(file &rest body
)
1160 (declare (indent 1))
1161 (let ((tempvar (make-symbol "file"))
1162 (rx (make-symbol "rx")))
1163 `(let* ((,tempvar
,file
)
1164 (,rx
(concat "\\(" org-babel-src-block-regexp
1165 "\\|" org-babel-inline-src-block-regexp
1166 "\\|" org-babel-lob-one-liner-regexp
"\\)"))
1167 (visited-p (or (null ,tempvar
)
1168 (get-file-buffer (expand-file-name ,tempvar
))))
1169 (point (point)) to-be-removed
)
1170 (save-window-excursion
1171 (when ,tempvar
(find-file ,tempvar
))
1172 (setq to-be-removed
(current-buffer))
1173 (goto-char (point-min))
1174 (while (re-search-forward ,rx nil t
)
1175 (when (org-babel-active-location-p)
1176 (goto-char (match-beginning 1))
1177 (when (looking-at org-babel-inline-src-block-regexp
)
1179 (save-match-data ,@body
))
1180 (goto-char (match-end 0))))
1181 (unless visited-p
(kill-buffer to-be-removed
))
1182 (goto-char point
))))
1183 (def-edebug-spec org-babel-map-executables
(form body
))
1186 (defun org-babel-execute-buffer (&optional arg
)
1187 "Execute source code blocks in a buffer.
1188 Call `org-babel-execute-src-block' on every source block in
1189 the current buffer."
1191 (org-babel-eval-wipe-error-buffer)
1192 (org-save-outline-visibility t
1193 (org-babel-map-executables nil
1194 (if (looking-at org-babel-lob-one-liner-regexp
)
1195 (org-babel-lob-execute-maybe)
1196 (org-babel-execute-src-block arg
)))))
1199 (defun org-babel-execute-subtree (&optional arg
)
1200 "Execute source code blocks in a subtree.
1201 Call `org-babel-execute-src-block' on every source block in
1202 the current subtree."
1206 (org-narrow-to-subtree)
1207 (org-babel-execute-buffer arg
)
1211 (defun org-babel-sha1-hash (&optional info
)
1212 "Generate an sha1 hash based on the value of info."
1214 (let ((print-level nil
)
1215 (info (or info
(org-babel-get-src-block-info))))
1217 (sort (copy-sequence (nth 2 info
))
1218 (lambda (a b
) (string< (car a
) (car b
)))))
1219 (let* ((rm (lambda (lst)
1220 (dolist (p '("replace" "silent" "none"
1221 "append" "prepend"))
1222 (setq lst
(remove p lst
)))
1225 (let ((v (if (and (listp (cdr arg
)) (null (cddr arg
)))
1226 (copy-sequence (cdr arg
))
1228 (when (and v
(not (and (sequencep v
)
1232 ((and (listp v
) ; lists are sorted
1233 (member (car arg
) '(:result-params
)))
1234 (sort (funcall rm v
) #'string
<))
1235 ((and (stringp v
) ; strings are sorted
1236 (member (car arg
) '(:results
:exports
)))
1237 (mapconcat #'identity
(sort (funcall rm
(split-string v
))
1242 (params (nth 2 info
))
1243 (body (if (org-babel-noweb-p params
:eval
)
1244 (org-babel-expand-noweb-references info
) (nth 1 info
)))
1245 (expand-cmd (intern (concat "org-babel-expand-body:" lang
)))
1246 (assignments-cmd (intern (concat "org-babel-variable-assignments:"
1249 (if (fboundp expand-cmd
) (funcall expand-cmd body params
)
1250 (org-babel-expand-body:generic
1251 body params
(and (fboundp assignments-cmd
)
1252 (funcall assignments-cmd params
))))))
1253 (let* ((it (format "%s-%s"
1256 (delq nil
(mapcar (lambda (arg)
1257 (let ((normalized (funcall norm arg
)))
1259 (format "%S" normalized
))))
1263 (when (org-called-interactively-p 'interactive
) (message hash
))
1266 (defun org-babel-current-result-hash (&optional info
)
1267 "Return the current in-buffer hash."
1268 (org-babel-where-is-src-block-result nil info
)
1269 (org-no-properties (match-string 5)))
1271 (defun org-babel-set-current-result-hash (hash info
)
1272 "Set the current in-buffer hash to HASH."
1273 (org-babel-where-is-src-block-result nil info
)
1274 (save-excursion (goto-char (match-beginning 5))
1275 (mapc #'delete-overlay
(overlays-at (point)))
1276 (forward-char org-babel-hash-show
)
1277 (mapc #'delete-overlay
(overlays-at (point)))
1278 (replace-match hash nil nil nil
5)
1279 (goto-char (point-at-bol))
1280 (org-babel-hide-hash)))
1282 (defun org-babel-hide-hash ()
1283 "Hide the hash in the current results line.
1284 Only the initial `org-babel-hash-show' characters of the hash
1285 will remain visible."
1286 (add-to-invisibility-spec '(org-babel-hide-hash . t
))
1288 (when (and (re-search-forward org-babel-result-regexp nil t
)
1290 (let* ((start (match-beginning 5))
1291 (hide-start (+ org-babel-hash-show start
))
1293 (hash (match-string 5))
1295 (setq ov1
(make-overlay start hide-start
))
1296 (setq ov2
(make-overlay hide-start end
))
1297 (overlay-put ov2
'invisible
'org-babel-hide-hash
)
1298 (overlay-put ov1
'babel-hash hash
)))))
1300 (defun org-babel-hide-all-hashes ()
1301 "Hide the hash in the current buffer.
1302 Only the initial `org-babel-hash-show' characters of each hash
1303 will remain visible. This function should be called as part of
1304 the `org-mode-hook'."
1306 (while (and (not org-babel-hash-show-time
)
1307 (re-search-forward org-babel-result-regexp nil t
))
1308 (goto-char (match-beginning 0))
1309 (org-babel-hide-hash)
1310 (goto-char (match-end 0)))))
1311 (add-hook 'org-mode-hook
'org-babel-hide-all-hashes
)
1313 (defun org-babel-hash-at-point (&optional point
)
1314 "Return the value of the hash at POINT.
1316 The hash is also added as the last element of the kill ring.
1317 This can be called with \\[org-ctrl-c-ctrl-c]."
1319 (let ((hash (car (delq nil
(mapcar
1320 (lambda (ol) (overlay-get ol
'babel-hash
))
1321 (overlays-at (or point
(point))))))))
1322 (when hash
(kill-new hash
) (message hash
))))
1323 (add-hook 'org-ctrl-c-ctrl-c-hook
'org-babel-hash-at-point
)
1325 (defun org-babel-result-hide-spec ()
1326 "Hide portions of results lines.
1327 Add `org-babel-hide-result' as an invisibility spec for hiding
1328 portions of results lines."
1329 (add-to-invisibility-spec '(org-babel-hide-result . t
)))
1330 (add-hook 'org-mode-hook
'org-babel-result-hide-spec
)
1332 (defvar org-babel-hide-result-overlays nil
1333 "Overlays hiding results.")
1335 (defun org-babel-result-hide-all ()
1336 "Fold all results in the current buffer."
1338 (org-babel-show-result-all)
1340 (while (re-search-forward org-babel-result-regexp nil t
)
1341 (save-excursion (goto-char (match-beginning 0))
1342 (org-babel-hide-result-toggle-maybe)))))
1344 (defun org-babel-show-result-all ()
1345 "Unfold all results in the current buffer."
1346 (mapc 'delete-overlay org-babel-hide-result-overlays
)
1347 (setq org-babel-hide-result-overlays nil
))
1350 (defun org-babel-hide-result-toggle-maybe ()
1351 "Toggle visibility of result at point."
1353 (let ((case-fold-search t
))
1355 (beginning-of-line 1)
1356 (looking-at org-babel-result-regexp
))
1357 (progn (org-babel-hide-result-toggle)
1358 t
) ;; to signal that we took action
1359 nil
))) ;; to signal that we did not
1361 (defun org-babel-hide-result-toggle (&optional force
)
1362 "Toggle the visibility of the current result."
1366 (if (re-search-forward org-babel-result-regexp nil t
)
1367 (let ((start (progn (beginning-of-line 2) (- (point) 1)))
1369 (while (looking-at org-babel-multi-line-header-regexp
)
1371 (goto-char (- (org-babel-result-end) 1)) (point)))
1373 (if (memq t
(mapcar (lambda (overlay)
1374 (eq (overlay-get overlay
'invisible
)
1375 'org-babel-hide-result
))
1376 (overlays-at start
)))
1377 (if (or (not force
) (eq force
'off
))
1379 (when (member ov org-babel-hide-result-overlays
)
1380 (setq org-babel-hide-result-overlays
1381 (delq ov org-babel-hide-result-overlays
)))
1382 (when (eq (overlay-get ov
'invisible
)
1383 'org-babel-hide-result
)
1384 (delete-overlay ov
)))
1385 (overlays-at start
)))
1386 (setq ov
(make-overlay start end
))
1387 (overlay-put ov
'invisible
'org-babel-hide-result
)
1388 ;; make the block accessible to isearch
1390 ov
'isearch-open-invisible
1392 (when (member ov org-babel-hide-result-overlays
)
1393 (setq org-babel-hide-result-overlays
1394 (delq ov org-babel-hide-result-overlays
)))
1395 (when (eq (overlay-get ov
'invisible
)
1396 'org-babel-hide-result
)
1397 (delete-overlay ov
))))
1398 (push ov org-babel-hide-result-overlays
)))
1399 (error "Not looking at a result line"))))
1401 ;; org-tab-after-check-for-cycling-hook
1402 (add-hook 'org-tab-first-hook
'org-babel-hide-result-toggle-maybe
)
1403 ;; Remove overlays when changing major mode
1404 (add-hook 'org-mode-hook
1405 (lambda () (org-add-hook 'change-major-mode-hook
1406 'org-babel-show-result-all
'append
'local
)))
1408 (defvar org-file-properties
)
1409 (defun org-babel-params-from-properties (&optional lang
)
1410 "Retrieve parameters specified as properties.
1411 Return a list of association lists of source block params
1412 specified in the properties of the current outline entry."
1415 ;; DEPRECATED header arguments specified as separate property at
1416 ;; point of definition.
1417 (org-babel-parse-multiple-vars
1421 (let* ((arg (symbol-name (car header
)))
1422 (val (org-entry-get (point) arg t
)))
1424 (cons (intern (concat ":" arg
))
1425 (org-babel-read val
)))))
1426 (org-babel-combine-header-arg-lists
1427 org-babel-common-header-args-w-values
1428 (let ((sym (intern (concat "org-babel-header-args:" lang
))))
1429 (and (boundp sym
) (symbol-value sym
)))))))
1430 ;; header arguments specified with the header-args property at
1432 (org-babel-parse-header-arguments
1433 (org-entry-get org-babel-current-src-block-location
1436 (and lang
; language-specific header arguments at point of call
1437 (org-babel-parse-header-arguments
1438 (org-entry-get org-babel-current-src-block-location
1439 (concat "header-args:" lang
)
1442 (defvar org-src-preserve-indentation
) ;; declare defcustom from org-src
1443 (defun org-babel-parse-src-block-match ()
1444 "Parse the results from a match of the `org-babel-src-block-regexp'."
1445 (let* ((block-indentation (string-width (match-string 1)))
1446 (lang (org-match-string-no-properties 2))
1447 (lang-headers (intern (concat "org-babel-default-header-args:" lang
)))
1448 (switches (match-string 3))
1449 (body (let* ((body (org-match-string-no-properties 5))
1450 (sub-length (- (length body
) 1)))
1451 (if (and (> sub-length
0)
1452 (string= "\n" (substring body sub-length
)))
1453 (substring body
0 sub-length
)
1455 (preserve-indentation (or org-src-preserve-indentation
1457 (string-match "-i\\>" switches
)))))
1459 ;; get block body less properties, protective commas, and indentation
1462 (insert (org-unescape-code-in-string body
))
1463 (unless preserve-indentation
(org-do-remove-indentation))
1465 (apply #'org-babel-merge-params
1466 org-babel-default-header-args
1467 (when (boundp lang-headers
) (eval lang-headers
))
1469 (org-babel-params-from-properties lang
)
1470 (list (org-babel-parse-header-arguments
1471 (org-no-properties (or (match-string 4) ""))))))
1473 block-indentation
)))
1475 (defun org-babel-parse-inline-src-block-match ()
1476 "Parse the results from a match of the `org-babel-inline-src-block-regexp'."
1477 (let* ((lang (org-no-properties (match-string 2)))
1478 (lang-headers (intern (concat "org-babel-default-header-args:" lang
))))
1480 (org-unescape-code-in-string (org-no-properties (match-string 5)))
1481 (apply #'org-babel-merge-params
1482 org-babel-default-inline-header-args
1483 (if (boundp lang-headers
) (eval lang-headers
) nil
)
1485 (org-babel-params-from-properties lang
)
1486 (list (org-babel-parse-header-arguments
1487 (org-no-properties (or (match-string 4) ""))))))
1490 (defun org-babel-balanced-split (string alts
)
1491 "Split STRING on instances of ALTS.
1492 ALTS is a cons of two character options where each option may be
1493 either the numeric code of a single character or a list of
1494 character alternatives. For example to split on balanced
1495 instances of \"[ \t]:\" set ALTS to ((32 9) . 58)."
1496 (let* ((matches (lambda (ch spec
) (if (listp spec
) (member ch spec
) (equal spec ch
))))
1497 (matched (lambda (ch last
)
1499 (and (funcall matches ch
(cdr alts
))
1500 (funcall matches last
(car alts
)))
1501 (funcall matches ch alts
))))
1502 (balance 0) (last 0)
1504 (mapc (lambda (ch) ; split on [], (), "" balanced instances of [ \t]:
1505 (setq balance
(+ balance
1506 (cond ((or (equal 91 ch
) (equal 40 ch
)) 1)
1507 ((or (equal 93 ch
) (equal 41 ch
)) -
1)
1509 (when (and (equal 34 ch
) (not (equal 92 last
)))
1510 (setq quote
(not quote
)))
1511 (setq partial
(cons ch partial
))
1512 (when (and (= balance
0) (not quote
) (funcall matched ch last
))
1513 (setq lst
(cons (apply #'string
(nreverse
1520 (string-to-list string
))
1521 (nreverse (cons (apply #'string
(nreverse partial
)) lst
))))
1523 (defun org-babel-join-splits-near-ch (ch list
)
1524 "Join splits where \"=\" is on either end of the split."
1525 (let ((last= (lambda (str) (= ch
(aref str
(1- (length str
))))))
1526 (first= (lambda (str) (= ch
(aref str
0)))))
1528 (org-reduce (lambda (acc el
)
1529 (let ((head (car acc
)))
1530 (if (and head
(or (funcall last
= head
) (funcall first
= el
)))
1531 (cons (concat head el
) (cdr acc
))
1533 list
:initial-value nil
))))
1535 (defun org-babel-parse-header-arguments (arg-string)
1536 "Parse a string of header arguments returning an alist."
1537 (when (> (length arg-string
) 0)
1538 (org-babel-parse-multiple-vars
1543 "\\([^ \f\t\n\r\v]+\\)[ \f\t\n\r\v]+\\([^ \f\t\n\r\v]+.*\\)"
1545 (cons (intern (match-string 1 arg
))
1546 (org-babel-read (org-babel-chomp (match-string 2 arg
))))
1547 (cons (intern (org-babel-chomp arg
)) nil
)))
1548 (let ((raw (org-babel-balanced-split arg-string
'((32 9) .
58))))
1549 (cons (car raw
) (mapcar (lambda (r) (concat ":" r
)) (cdr raw
)))))))))
1551 (defun org-babel-parse-multiple-vars (header-arguments)
1552 "Expand multiple variable assignments behind a single :var keyword.
1554 This allows expression of multiple variables with one :var as
1557 #+PROPERTY: var foo=1, bar=2"
1559 (mapc (lambda (pair)
1560 (if (eq (car pair
) :var
)
1561 (mapcar (lambda (v) (push (cons :var
(org-babel-trim v
)) results
))
1562 (org-babel-join-splits-near-ch
1563 61 (org-babel-balanced-split (cdr pair
) 32)))
1564 (push pair results
)))
1566 (nreverse results
)))
1568 (defun org-babel-process-params (params)
1569 "Expand variables in PARAMS and add summary parameters."
1570 (let* ((processed-vars (mapcar (lambda (el)
1571 (if (consp (cdr el
))
1573 (org-babel-ref-parse (cdr el
))))
1574 (org-babel-get-header params
:var
)))
1575 (vars-and-names (if (and (assoc :colname-names params
)
1576 (assoc :rowname-names params
))
1577 (list processed-vars
)
1578 (org-babel-disassemble-tables
1580 (cdr (assoc :hlines params
))
1581 (cdr (assoc :colnames params
))
1582 (cdr (assoc :rownames params
)))))
1583 (raw-result (or (cdr (assoc :results params
)) ""))
1584 (result-params (append
1585 (split-string (if (stringp raw-result
)
1588 (cdr (assoc :result-params params
)))))
1590 (mapcar (lambda (var) (cons :var var
)) (car vars-and-names
))
1592 (cons :colname-names
(or (cdr (assoc :colname-names params
))
1593 (cadr vars-and-names
)))
1594 (cons :rowname-names
(or (cdr (assoc :rowname-names params
))
1595 (caddr vars-and-names
)))
1596 (cons :result-params result-params
)
1597 (cons :result-type
(cond ((member "output" result-params
) 'output
)
1598 ((member "value" result-params
) 'value
)
1601 (lambda (x) (memq (car x
) '(:colname-names
:rowname-names
:result-params
1602 :result-type
:var
)))
1605 ;; row and column names
1606 (defun org-babel-del-hlines (table)
1607 "Remove all `hline's from TABLE."
1608 (remq 'hline table
))
1610 (defun org-babel-get-colnames (table)
1611 "Return the column names of TABLE.
1612 Return a cons cell, the `car' of which contains the TABLE less
1613 colnames, and the `cdr' of which contains a list of the column
1615 (if (equal 'hline
(nth 1 table
))
1616 (cons (cddr table
) (car table
))
1617 (cons (cdr table
) (car table
))))
1619 (defun org-babel-get-rownames (table)
1620 "Return the row names of TABLE.
1621 Return a cons cell, the `car' of which contains the TABLE less
1622 rownames, and the `cdr' of which contains a list of the rownames.
1623 Note: this function removes any hlines in TABLE."
1624 (let* ((table (org-babel-del-hlines table
))
1625 (rownames (funcall (lambda ()
1631 (setq tp
(cdr tp
))))
1633 (cons table rownames
)))
1635 (defun org-babel-put-colnames (table colnames
)
1636 "Add COLNAMES to TABLE if they exist."
1637 (if colnames
(apply 'list colnames
'hline table
) table
))
1639 (defun org-babel-put-rownames (table rownames
)
1640 "Add ROWNAMES to TABLE if they exist."
1642 (mapcar (lambda (row)
1644 (cons (or (pop rownames
) "") row
)
1648 (defun org-babel-pick-name (names selector
)
1649 "Select one out of an alist of row or column names.
1650 SELECTOR can be either a list of names in which case those names
1651 will be returned directly, or an index into the list NAMES in
1652 which case the indexed names will be return."
1653 (if (listp selector
)
1656 (if (and selector
(symbolp selector
) (not (equal t selector
)))
1657 (cdr (assoc selector names
))
1658 (if (integerp selector
)
1659 (nth (- selector
1) names
)
1660 (cdr (car (last names
))))))))
1662 (defun org-babel-disassemble-tables (vars hlines colnames rownames
)
1663 "Parse tables for further processing.
1664 Process the variables in VARS according to the HLINES,
1665 ROWNAMES and COLNAMES header arguments. Return a list consisting
1666 of the vars, cnames and rnames."
1667 (let (cnames rnames
)
1671 (when (listp (cdr var
))
1672 (when (and (not (equal colnames
"no"))
1673 (or colnames
(and (equal (nth 1 (cdr var
)) 'hline
)
1674 (not (member 'hline
(cddr (cdr var
)))))))
1675 (let ((both (org-babel-get-colnames (cdr var
))))
1676 (setq cnames
(cons (cons (car var
) (cdr both
))
1678 (setq var
(cons (car var
) (car both
)))))
1679 (when (and rownames
(not (equal rownames
"no")))
1680 (let ((both (org-babel-get-rownames (cdr var
))))
1681 (setq rnames
(cons (cons (car var
) (cdr both
))
1683 (setq var
(cons (car var
) (car both
)))))
1684 (when (and hlines
(not (equal hlines
"yes")))
1685 (setq var
(cons (car var
) (org-babel-del-hlines (cdr var
))))))
1688 (reverse cnames
) (reverse rnames
))))
1690 (defun org-babel-reassemble-table (table colnames rownames
)
1691 "Add column and row names to a table.
1692 Given a TABLE and set of COLNAMES and ROWNAMES add the names
1693 to the table for reinsertion to org-mode."
1695 (let ((table (if (and rownames
(= (length table
) (length rownames
)))
1696 (org-babel-put-rownames table rownames
) table
)))
1697 (if (and colnames
(listp (car table
)) (= (length (car table
))
1699 (org-babel-put-colnames table colnames
) table
))
1702 (defun org-babel-where-is-src-block-head ()
1703 "Find where the current source block begins.
1704 Return the point at the beginning of the current source block.
1705 Specifically at the beginning of the #+BEGIN_SRC line. Also set
1706 match-data relatively to `org-babel-src-block-regexp', which see.
1707 If the point is not on a source block then return nil."
1708 (let ((element (org-element-at-point)))
1709 (when (eq (org-element-type element
) 'src-block
)
1710 (let ((end (org-element-property :end element
)))
1711 (org-with-wide-buffer
1712 ;; Ensure point is not on a blank line after the block.
1714 (skip-chars-forward " \r\t\n" end
)
1715 (when (< (point) end
)
1716 (prog1 (goto-char (org-element-property :post-affiliated element
))
1717 (looking-at org-babel-src-block-regexp
))))))))
1720 (defun org-babel-goto-src-block-head ()
1721 "Go to the beginning of the current code block."
1723 (let ((head (org-babel-where-is-src-block-head)))
1724 (if head
(goto-char head
) (error "Not currently in a code block"))))
1727 (defun org-babel-goto-named-src-block (name)
1728 "Go to a named source-code block."
1730 (let ((completion-ignore-case t
)
1731 (case-fold-search t
)
1732 (under-point (thing-at-point 'line
)))
1733 (list (org-icompleting-read
1734 "source-block name: " (org-babel-src-block-names) nil t
1737 ((string-match (org-babel-noweb-wrap) under-point
)
1738 (let ((block-name (match-string 1 under-point
)))
1739 (string-match "[^(]*" block-name
)
1740 (match-string 0 block-name
)))
1742 ((string-match org-babel-lob-one-liner-regexp under-point
)
1743 (let ((source-info (car (org-babel-lob-get-info))))
1744 (if (string-match "^\\([^\\[]+?\\)\\(\\[.*\\]\\)?(" source-info
)
1745 (let ((source-name (match-string 1 source-info
)))
1748 ((string-match (concat "#\\+" org-babel-results-keyword
1749 "\\:\s+\\([^\\(]*\\)") under-point
)
1750 (match-string 1 under-point
))
1752 ((and (thing-at-point 'symbol
))
1753 (org-babel-find-named-block (thing-at-point 'symbol
))
1754 (thing-at-point 'symbol
))
1756 (let ((point (org-babel-find-named-block name
)))
1758 ;; taken from `org-open-at-point'
1759 (progn (org-mark-ring-push) (goto-char point
) (org-show-context))
1760 (message "source-code block `%s' not found in this buffer" name
))))
1762 (defun org-babel-find-named-block (name)
1763 "Find a named source-code block.
1764 Return the location of the source block identified by source
1765 NAME, or nil if no such block exists. Set match data according
1766 to `org-babel-named-src-block-regexp'."
1768 (goto-char (point-min))
1770 (org-next-block 1 nil
(org-babel-named-src-block-regexp-for-name name
)))))
1772 (defun org-babel-src-block-names (&optional file
)
1773 "Returns the names of source blocks in FILE or the current buffer."
1774 (when file
(find-file file
))
1776 (goto-char (point-min))
1777 (let ((re (org-babel-named-src-block-regexp-for-name))
1779 (while (ignore-errors (org-next-block 1 nil re
))
1780 (push (org-match-string-no-properties 9) names
))
1784 (defun org-babel-goto-named-result (name)
1785 "Go to a named result."
1787 (let ((completion-ignore-case t
))
1788 (list (org-icompleting-read "source-block name: "
1789 (org-babel-result-names) nil t
))))
1790 (let ((point (org-babel-find-named-result name
)))
1792 ;; taken from `org-open-at-point'
1793 (progn (goto-char point
) (org-show-context))
1794 (message "result `%s' not found in this buffer" name
))))
1796 (defun org-babel-find-named-result (name &optional point
)
1797 "Find a named result.
1798 Return the location of the result named NAME in the current
1799 buffer or nil if no such result exists."
1801 (let ((case-fold-search t
))
1802 (goto-char (or point
(point-min)))
1803 (catch 'is-a-code-block
1804 (when (re-search-forward
1805 (concat org-babel-result-regexp
1806 "[ \t]" (regexp-quote name
) "[ \t]*[\n\f\v\r]") nil t
)
1807 (when (and (string= "name" (downcase (match-string 1)))
1808 (or (beginning-of-line 1)
1809 (looking-at org-babel-src-block-regexp
)
1810 (looking-at org-babel-multi-line-header-regexp
)
1811 (looking-at org-babel-lob-one-liner-regexp
)))
1812 (throw 'is-a-code-block
(org-babel-find-named-result name
(point))))
1813 (beginning-of-line 0) (point))))))
1815 (defun org-babel-result-names (&optional file
)
1816 "Returns the names of results in FILE or the current buffer."
1818 (when file
(find-file file
)) (goto-char (point-min))
1819 (let ((case-fold-search t
) names
)
1820 (while (re-search-forward org-babel-result-w-name-regexp nil t
)
1821 (setq names
(cons (match-string 4) names
)))
1825 (defun org-babel-next-src-block (&optional arg
)
1826 "Jump to the next source block.
1827 With optional prefix argument ARG, jump forward ARG many source blocks."
1829 (org-next-block arg nil org-babel-src-block-regexp
))
1832 (defun org-babel-previous-src-block (&optional arg
)
1833 "Jump to the previous source block.
1834 With optional prefix argument ARG, jump backward ARG many source blocks."
1836 (org-previous-block arg org-babel-src-block-regexp
))
1838 (defvar org-babel-load-languages
)
1841 (defun org-babel-mark-block ()
1842 "Mark current src block."
1844 (let ((head (org-babel-where-is-src-block-head)))
1848 (looking-at org-babel-src-block-regexp
))
1849 (push-mark (match-end 5) nil t
)
1850 (goto-char (match-beginning 5)))))
1852 (defun org-babel-demarcate-block (&optional arg
)
1853 "Wrap or split the code in the region or on the point.
1854 When called from inside of a code block the current block is
1855 split. When called from outside of a code block a new code block
1856 is created. In both cases if the region is demarcated and if the
1857 region is not active then the point is demarcated."
1859 (let* ((info (org-babel-get-src-block-info 'light
))
1860 (start (org-babel-where-is-src-block-head))
1861 (block (and start
(match-string 0)))
1862 (headers (and start
(match-string 4)))
1863 (stars (concat (make-string (or (org-current-level) 1) ?
*) " "))
1864 (lower-case-p (and block
1865 (let (case-fold-search)
1866 (org-string-match-p "#\\+begin_src" block
)))))
1872 (let ((lang (nth 0 info
))
1873 (indent (make-string (nth 5 info
) ?
)))
1874 (when (string-match "^[[:space:]]*$"
1875 (buffer-substring (point-at-bol)
1877 (delete-region (point-at-bol) (point-at-eol)))
1879 (if (looking-at "^") "" "\n")
1880 indent
(funcall (if lower-case-p
'downcase
'upcase
) "#+end_src\n")
1881 (if arg stars indent
) "\n"
1882 indent
(funcall (if lower-case-p
'downcase
'upcase
) "#+begin_src ")
1884 (if (> (length headers
) 1)
1885 (concat " " headers
) headers
)
1886 (if (looking-at "[\n\r]")
1888 (concat "\n" (make-string (current-column) ?
)))))))
1889 (move-end-of-line 2))
1890 (sort (if (org-region-active-p) (list (mark) (point)) (list (point))) #'>))
1891 (let ((start (point))
1892 (lang (org-icompleting-read
1894 (mapcar #'symbol-name
1896 (append (mapcar #'car org-babel-load-languages
)
1897 (mapcar (lambda (el) (intern (car el
)))
1898 org-src-lang-modes
))))))
1899 (body (delete-and-extract-region
1900 (if (org-region-active-p) (mark) (point)) (point))))
1901 (insert (concat (if (looking-at "^") "" "\n")
1902 (if arg
(concat stars
"\n") "")
1903 (funcall (if lower-case-p
'downcase
'upcase
) "#+begin_src ")
1906 (if (or (= (length body
) 0)
1907 (string-match "[\r\n]$" body
)) "" "\n")
1908 (funcall (if lower-case-p
'downcase
'upcase
) "#+end_src\n")))
1909 (goto-char start
) (move-end-of-line 1)))))
1911 (defvar org-babel-lob-one-liner-regexp
)
1912 (defun org-babel-where-is-src-block-result (&optional insert info hash indent
)
1913 "Find where the current source block results begin.
1914 Return the point at the beginning of the result of the current
1915 source block. Specifically at the beginning of the results line.
1916 If no result exists for this block then create a results line
1917 following the source block."
1919 (let* ((case-fold-search t
)
1920 (on-lob-line (save-excursion
1921 (beginning-of-line 1)
1922 (looking-at org-babel-lob-one-liner-regexp
)))
1923 (inlinep (when (org-babel-get-inline-src-block-matches)
1925 (name (nth 4 (or info
(org-babel-get-src-block-info 'light
))))
1926 (head (unless on-lob-line
(org-babel-where-is-src-block-head)))
1928 (when head
(goto-char head
))
1929 (org-with-wide-buffer
1931 found
;; was there a result (before we potentially insert one)
1936 ;; - return t if it is found, else return nil
1937 ;; - if it does not need to be rebuilt, then don't set end
1938 ;; - if it does need to be rebuilt then do set end
1939 name
(setq beg
(org-babel-find-named-result name
))
1941 (when (and hash
(not (string= hash
(match-string 5))))
1942 (goto-char beg
) (setq end beg
) ;; beginning of result
1944 (delete-region end
(org-babel-result-end)) nil
)))
1947 ;; - return t if it is found, else return nil
1948 ;; - if it is found, and the hash doesn't match, delete and set end
1949 (or on-lob-line
(re-search-forward "^[ \t]*#\\+end_src" nil t
))
1950 (progn (end-of-line 1)
1951 (if (eobp) (insert "\n") (forward-char 1))
1955 (progn ;; unnamed results line already exists
1957 (while (re-search-forward "[^ \f\t\n\r\v]" nil t
)
1958 (beginning-of-line 1)
1960 ((looking-at (concat org-babel-result-regexp
"\n"))
1961 (throw 'non-comment t
))
1962 ((and (looking-at "^[ \t]*#")
1964 org-babel-lob-one-liner-regexp
)))
1966 (t (throw 'non-comment nil
))))))
1967 (let ((this-hash (match-string 5)))
1969 ;; must remove and rebuild if hash!=old-hash
1970 (if (and hash
(not (string= hash this-hash
)))
1972 (setq end
(point-at-bol))
1974 (delete-region end
(org-babel-result-end))
1976 (setq end nil
))))))))))
1977 (if (not (and insert end
)) found
1980 (if (looking-at "[\n\r]") (forward-char 1) (insert "\n")))
1981 (when (wholenump indent
) (indent-to indent
))
1983 "#+" org-babel-results-keyword
1985 (if org-babel-hash-show-time
1987 "["(format-time-string "<%Y-%m-%d %H:%M:%S>")" "hash
"]")
1988 (concat "["hash
"]")))
1990 (when name
(concat " " name
)) "\n"))
1991 (unless beg
(insert "\n") (backward-char))
1992 (beginning-of-line 0)
1993 (when hash
(org-babel-hide-hash))
1996 (defvar org-block-regexp
)
1997 (defun org-babel-read-result ()
1998 "Read the result at `point' into emacs-lisp."
1999 (let ((case-fold-search t
) result-string
)
2001 ((org-at-table-p) (org-babel-read-table))
2002 ((org-at-item-p) (org-babel-read-list))
2003 ((looking-at org-bracket-link-regexp
) (org-babel-read-link))
2004 ((looking-at org-block-regexp
) (org-remove-indentation (match-string 4)))
2005 ((or (looking-at "^[ \t]*: ") (looking-at "^[ \t]*:$"))
2008 (mapconcat (lambda (line)
2009 (or (and (> (length line
) 1)
2010 (string-match "^[ \t]*: ?\\(.+\\)" line
)
2011 (match-string 1 line
))
2015 (point) (org-babel-result-end)) "[\r\n]+")
2017 (or (org-babel-number-p result-string
) result-string
))
2018 ((looking-at org-babel-result-regexp
)
2019 (save-excursion (forward-line 1) (org-babel-read-result))))))
2021 (defun org-babel-read-table ()
2022 "Read the table at `point' into emacs-lisp."
2023 (mapcar (lambda (row)
2024 (if (and (symbolp row
) (equal row
'hline
)) row
2025 (mapcar (lambda (el) (org-babel-read el
'inhibit-lisp-eval
)) row
)))
2026 (org-table-to-lisp)))
2028 (defun org-babel-read-list ()
2029 "Read the list at `point' into emacs-lisp."
2030 (mapcar (lambda (el) (org-babel-read el
'inhibit-lisp-eval
))
2031 (mapcar #'cadr
(cdr (org-list-parse-list)))))
2033 (defvar org-link-types-re
)
2034 (defun org-babel-read-link ()
2035 "Read the link at `point' into emacs-lisp.
2036 If the path of the link is a file path it is expanded using
2037 `expand-file-name'."
2038 (let* ((case-fold-search t
)
2039 (raw (and (looking-at org-bracket-link-regexp
)
2040 (org-no-properties (match-string 1))))
2041 (type (and (string-match org-link-types-re raw
)
2042 (match-string 1 raw
))))
2044 ((not type
) (expand-file-name raw
))
2045 ((string= type
"file")
2046 (and (string-match "file\\(.*\\):\\(.+\\)" raw
)
2047 (expand-file-name (match-string 2 raw
))))
2050 (defun org-babel-format-result (result &optional sep
)
2051 "Format RESULT for writing to file."
2052 (let ((echo-res (lambda (r) (if (stringp r
) r
(format "%S" r
)))))
2056 result
(list :sep
(or sep
"\t") :fmt echo-res
))
2058 (funcall echo-res result
))))
2060 (defun org-babel-insert-result
2061 (result &optional result-params info hash indent lang
)
2062 "Insert RESULT into the current buffer.
2064 By default RESULT is inserted after the end of the current source
2065 block. The RESULT of an inline source block usually will be
2066 wrapped inside a `results' macro and placed on the same line as
2067 the inline source block. The macro is stripped upon export.
2068 Multiline and non-scalar RESULTS from inline source blocks are
2069 not allowed. With optional argument RESULT-PARAMS controls
2070 insertion of results in the Org mode file. RESULT-PARAMS can
2071 take the following values:
2073 replace - (default option) insert results after the source block
2074 or inline source block replacing any previously
2077 silent -- no results are inserted into the Org-mode buffer but
2078 the results are echoed to the minibuffer and are
2079 ingested by Emacs (a potentially time consuming
2082 file ---- the results are interpreted as a file path, and are
2083 inserted into the buffer using the Org-mode file syntax.
2085 list ---- the results are interpreted as an Org-mode list.
2087 raw ----- results are added directly to the Org-mode file. This
2088 is a good option if you code block will output org-mode
2091 drawer -- results are added directly to the Org-mode file as with
2092 \"raw\", but are wrapped in a RESULTS drawer or results
2093 macro, allowing them to later be replaced or removed
2096 org ----- results are added inside of a \"src_org{}\" or \"#+BEGIN_SRC
2097 org\" block depending on whether the current source block is
2098 inline or not. They are not comma-escaped when inserted,
2099 but Org syntax here will be discarded when exporting the
2102 html ---- results are added inside of a #+BEGIN_HTML block or
2103 html export snippet depending on whether the current
2104 source block is inline or not. This is a good option
2105 if your code block will output html formatted text.
2107 latex --- results are added inside of a #+BEGIN_LATEX block or
2108 latex export snippet depending on whether the current
2109 source block is inline or not. This is a good option
2110 if your code block will output latex formatted text.
2112 code ---- the results are extracted in the syntax of the source
2113 code of the language being evaluated and are added
2114 inside of a source block with the source-code language
2115 set appropriately. Also, source block inlining is
2116 preserved in this case. Note this relies on the
2117 optional LANG argument.
2119 list ---- the results are rendered as a list. This option not
2120 allowed for inline src blocks.
2122 table --- the results are rendered as a table. This option not
2123 allowed for inline src blocks.
2125 INFO may provide the values of these header arguments (in the
2126 `header-arguments-alist' see the docstring for
2127 `org-babel-get-src-block-info'):
2129 :file --- the name of the file to which output should be written.
2131 :wrap --- the effect is similar to `latex' in RESULT-PARAMS but
2132 using the argument supplied to specify the export block
2135 (if (stringp result
)
2137 (setq result
(org-no-properties result
))
2138 (when (member "file" result-params
)
2139 (setq result
(org-babel-result-to-file
2140 result
(when (assoc :file-desc
(nth 2 info
))
2141 (or (cdr (assoc :file-desc
(nth 2 info
)))
2143 (unless (listp result
) (setq result
(format "%S" result
))))
2144 (if (and result-params
(member "silent" result-params
))
2146 (message (replace-regexp-in-string "%" "%%" (format "%S" result
)))
2151 (when (or (org-babel-get-inline-src-block-matches)
2152 (org-babel-get-lob-one-liner-matches))
2153 (goto-char (match-end 0))
2154 (org-babel-remove-inline-result)
2159 (org-babel-where-is-src-block-result t info hash indent
)))
2163 (and (member "table" result-params
) "`:results table'")
2164 (and (listp result
) "list result")
2165 (and (org-string-match-p "\n." result
) "multiline result")
2166 (and (member "list" result-params
) "`:results list'"))))
2168 (cdr (assoc :results_switches
(nth 2 info
))))
2169 (visible-beg (point-min-marker))
2170 (visible-end (point-max-marker))
2171 ;; When results exist outside of the current visible
2172 ;; region of the buffer, be sure to widen buffer to
2174 (outside-scope-p (and existing-result
2175 (or (> visible-beg existing-result
)
2176 (<= visible-end existing-result
))))
2178 (when (and (stringp result
) ; ensure results end in a newline
2180 (> (length result
) 0)
2181 (not (or (string-equal (substring result -
1) "\n")
2182 (string-equal (substring result -
1) "\r"))))
2183 (setq result
(concat result
"\n")))
2186 (when outside-scope-p
(widen))
2187 (if (not existing-result
)
2188 (setq beg
(or inlinep
(point)))
2189 (goto-char existing-result
)
2191 (re-search-forward "#" nil t
)
2192 (setq indent
(- (current-column) 1)))
2196 ((member "replace" result-params
)
2197 (delete-region (point) (org-babel-result-end)))
2198 ((member "append" result-params
)
2199 (goto-char (org-babel-result-end)) (setq beg
(point-marker)))
2200 ((member "prepend" result-params
)))) ; already there
2201 (setq results-switches
2202 (if results-switches
(concat " " results-switches
) ""))
2203 (let ((wrap (lambda (start finish
&optional no-escape no-newlines
2204 inline-start inline-finish
)
2206 (setq start inline-start
)
2207 (setq finish inline-finish
)
2208 (setq no-newlines t
))
2210 (insert (concat finish
(unless no-newlines
"\n")))
2212 (insert (concat start
(unless no-newlines
"\n")))
2214 (org-escape-code-in-region (min (point) end
) end
))
2216 (unless no-newlines
(goto-char (point-at-eol)))
2217 (setq end
(point-marker))))
2220 ;; Non-nil when result R can be turned into
2223 (null (cdr (last r
)))
2225 (lambda (e) (or (atom e
) (null (cdr (last e
)))))
2227 ;; insert results based on type
2229 ;; Do nothing for an empty result.
2231 ;; Illegal inline result or params.
2233 (error "Inline error: %s cannot be used" bad-inline-p
))
2234 ;; insert a list if preferred
2235 ((member "list" result-params
)
2238 (org-list-to-generic
2241 (lambda (el) (list nil
(if (stringp el
) el
(format "%S" el
))))
2242 (if (listp result
) result
(split-string result
"\n" t
))))
2243 '(:splicep nil
:istart
"- " :iend
"\n")))
2245 ;; Try hard to print RESULT as a table. Give up if
2246 ;; it contains an improper list.
2247 ((funcall tabulablep result
)
2249 (insert (concat (orgtbl-to-orgtbl
2252 (or (eq e
'hline
) (listp e
)))
2259 (when (org-at-table-p) (org-table-align))
2260 (goto-char (org-table-end)))
2261 ;; Print verbatim a list that cannot be turned into
2263 ((listp result
) (insert (format "%s\n" result
)))
2264 ((member "file" result-params
)
2267 (setq result
(org-macro-escape-arguments result
)))
2270 (not (member "raw" result-params
)))
2272 (insert (org-macro-escape-arguments
2273 (org-babel-chomp result
"\n"))))
2274 (t (goto-char beg
) (insert result
)))
2275 (setq end
(point-marker))
2276 ;; possibly wrap result
2278 (bad-inline-p) ; Do nothing.
2279 ((assoc :wrap
(nth 2 info
))
2280 (let ((name (or (cdr (assoc :wrap
(nth 2 info
))) "RESULTS")))
2281 (funcall wrap
(concat "#+BEGIN_" name
)
2282 (concat "#+END_" (car (org-split-string name
)))
2283 nil nil
(concat "{{{results(@@" name
":") "@@)}}}")))
2284 ((member "html" result-params
)
2285 (funcall wrap
"#+BEGIN_HTML" "#+END_HTML" nil nil
2286 "{{{results(@@html:" "@@)}}}"))
2287 ((member "latex" result-params
)
2288 (funcall wrap
"#+BEGIN_LaTeX" "#+END_LaTeX" nil nil
2289 "{{{results(@@latex:" "@@)}}}"))
2290 ((member "org" result-params
)
2291 (goto-char beg
) (if (org-at-table-p) (org-cycle))
2292 (funcall wrap
"#+BEGIN_SRC org" "#+END_SRC" nil nil
2293 "{{{results(src_org{" "})}}}"))
2294 ((member "code" result-params
)
2295 (let ((lang (or lang
"none")))
2296 (funcall wrap
(format "#+BEGIN_SRC %s%s" lang results-switches
)
2298 (format "{{{results(src_%s[%s]{" lang results-switches
)
2300 ((member "raw" result-params
)
2301 (goto-char beg
) (if (org-at-table-p) (org-cycle)))
2302 ((or (member "drawer" result-params
)
2303 ;; Stay backward compatible with <7.9.2
2304 (member "wrap" result-params
))
2305 (goto-char beg
) (if (org-at-table-p) (org-cycle))
2306 (funcall wrap
":RESULTS:" ":END:" 'no-escape nil
2307 "{{{results(" ")}}}"))
2308 ((and inlinep
(member "file" result-params
))
2309 (funcall wrap nil nil nil nil
"{{{results(" ")}}}"))
2310 ((and (not (funcall tabulablep result
))
2311 (not (member "file" result-params
)))
2312 (let ((org-babel-inline-result-wrap
2313 ;; Hard code {{{results(...)}}} on top of customization.
2314 (format "{{{results(%s)}}}" org-babel-inline-result-wrap
)))
2315 (org-babel-examplify-region beg end results-switches
)
2316 (setq end
(point))))))
2317 ;; possibly indent the results to match the #+results line
2318 (when (and (not inlinep
) (numberp indent
) indent
(> indent
0)
2319 ;; in this case `table-align' does the work for us
2320 (not (and (listp result
)
2321 (member "append" result-params
))))
2322 (indent-rigidly beg end indent
))
2324 (if (member "value" result-params
)
2325 (message "Code block returned no value.")
2326 (message "Code block produced no output."))
2327 (message "Code block evaluation complete.")))
2328 (when outside-scope-p
(narrow-to-region visible-beg visible-end
))
2329 (set-marker visible-beg nil
)
2330 (set-marker visible-end nil
))))))
2332 (defun org-babel-remove-result (&optional info keep-keyword
)
2333 "Remove the result of the current source block."
2335 (let ((location (org-babel-where-is-src-block-result nil info
)))
2338 (goto-char location
)
2339 (when (looking-at (concat org-babel-result-regexp
".*$"))
2341 (if keep-keyword
(1+ (match-end 0)) (1- (match-beginning 0)))
2342 (progn (forward-line 1) (org-babel-result-end))))))))
2344 (defun org-babel-remove-inline-result ()
2345 "Remove the result of the current inline-src-block or babel call.
2346 The result must be wrapped in a `results' macro to be removed.
2347 Leading whitespace is trimmed."
2349 (let* ((el (org-element-context))
2350 (post-blank (org-element-property :post-blank el
)))
2351 (when (memq (org-element-type el
) '(inline-src-block inline-babel-call
))
2352 (org-with-wide-buffer
2353 (goto-char (org-element-property :end el
))
2354 (let ((el (org-element-context)))
2355 (when (and (eq (org-element-type el
) 'macro
)
2356 (string= (org-element-property :key el
) "results"))
2357 (delete-region ; And leading whitespace.
2358 (- (org-element-property :begin el
) post-blank
)
2359 (- (org-element-property :end el
)
2360 (org-element-property :post-blank el
)))))))))
2362 (defun org-babel-remove-result-one-or-many (x)
2363 "Remove the result of the current source block.
2364 If called with a prefix argument, remove all result blocks
2368 (org-babel-map-src-blocks nil
(org-babel-remove-result))
2369 (org-babel-remove-result)))
2371 (defun org-babel-result-end ()
2372 "Return the point at the end of the current set of results."
2375 ((org-at-table-p) (progn (goto-char (org-table-end)) (point)))
2376 ((org-at-item-p) (let* ((struct (org-list-struct))
2377 (prvs (org-list-prevs-alist struct
)))
2378 (org-list-get-list-end (point-at-bol) struct prvs
)))
2379 ((let ((case-fold-search t
)) (looking-at "^\\([ \t]*\\):results:"))
2380 (progn (re-search-forward (concat "^" (match-string 1) ":END:"))
2381 (forward-char 1) (point)))
2383 (let ((case-fold-search t
))
2384 (if (looking-at (concat "[ \t]*#\\+begin_\\([^ \t\n\r]+\\)"))
2385 (progn (re-search-forward (concat "[ \t]*#\\+end_" (match-string 1))
2388 (while (looking-at "[ \t]*\\(: \\|:$\\|\\[\\[\\)")
2392 (defun org-babel-result-to-file (result &optional description
)
2393 "Convert RESULT into an `org-mode' link with optional DESCRIPTION.
2394 If the `default-directory' is different from the containing
2395 file's directory then expand relative links."
2396 (when (stringp result
)
2397 (format "[[file:%s]%s]"
2398 (if (and default-directory
2400 (not (string= (expand-file-name default-directory
)
2402 (file-name-directory buffer-file-name
)))))
2403 (expand-file-name result default-directory
)
2405 (if description
(concat "[" description
"]") ""))))
2407 (defvar org-babel-capitalize-example-region-markers nil
2408 "Make true to capitalize begin/end example markers inserted by code blocks.")
2410 (define-obsolete-function-alias
2411 'org-babel-examplize-region
2412 'org-babel-examplify-region
"25.1")
2414 (defun org-babel-examplify-region (beg end
&optional results-switches
)
2415 "Comment out region using the inline `==' or `: ' org example quote."
2417 (let ((chars-between (lambda (b e
)
2418 (not (string-match "^[\\s]*$"
2419 (buffer-substring b e
)))))
2420 (maybe-cap (lambda (str) (if org-babel-capitalize-example-region-markers
2422 (beg-bol (save-excursion (goto-char beg
) (point-at-bol)))
2423 (end-bol (save-excursion (goto-char end
) (point-at-bol)))
2424 (end-eol (save-excursion (goto-char end
) (point-at-eol))))
2425 (if (and (not (= end end-bol
))
2426 (or (funcall chars-between beg-bol beg
)
2427 (funcall chars-between end end-eol
)))
2430 (insert (format org-babel-inline-result-wrap
2431 (prog1 (buffer-substring beg end
)
2432 (delete-region beg end
)))))
2433 (let ((size (count-lines beg end
)))
2435 (cond ((= size
0)) ; do nothing for an empty result
2436 ((< size org-babel-min-lines-for-block-output
)
2439 (beginning-of-line 1) (insert ": ") (forward-line 1)))
2442 (insert (if results-switches
2444 (funcall maybe-cap
"#+begin_example")
2446 (funcall maybe-cap
"#+begin_example\n")))
2447 (if (markerp end
) (goto-char end
) (forward-char (- end beg
)))
2448 (insert (funcall maybe-cap
"#+end_example\n")))))))))
2450 (defun org-babel-update-block-body (new-body)
2451 "Update the body of the current code block to NEW-BODY."
2452 (if (not (org-babel-where-is-src-block-head))
2453 (error "Not in a source block")
2455 (replace-match (concat (org-babel-trim (org-remove-indentation new-body
))
2457 (indent-rigidly (match-beginning 5) (match-end 5) 2)))
2459 (defun org-babel-merge-params (&rest plists
)
2460 "Combine all parameter association lists in PLISTS.
2461 Later elements of PLISTS override the values of previous elements.
2462 This takes into account some special considerations for certain
2463 parameters when merging lists."
2464 (let* ((results-exclusive-groups
2465 (mapcar (lambda (group) (mapcar #'symbol-name group
))
2466 (cdr (assoc 'results org-babel-common-header-args-w-values
))))
2467 (exports-exclusive-groups
2468 (mapcar (lambda (group) (mapcar #'symbol-name group
))
2469 (cdr (assoc 'exports org-babel-common-header-args-w-values
))))
2471 (e-merge (lambda (exclusive-groups &rest result-params
)
2472 ;; maintain exclusivity of mutually exclusive parameters
2474 (mapc (lambda (new-params)
2475 (mapc (lambda (new-param)
2476 (mapc (lambda (exclusive-group)
2477 (when (member new-param exclusive-group
)
2478 (mapcar (lambda (excluded-param)
2485 (setq output
(org-uniquify
2486 (cons new-param output
))))
2490 params results exports tangle noweb cache vars shebang comments padline
2499 (let ((name (if (listp (cdr pair
))
2501 (and (string-match "^\\([^= \f\t\n\r\v]+\\)[ \t]*="
2503 (intern (match-string 1 (cdr pair
)))))))
2507 (if (member name
(mapcar #'car vars
))
2509 (push name clearnames
)
2513 (unless (equal (car p
) name
) p
))
2516 (list (cons name pair
))))
2517 ;; if no name is given and we already have named variables
2518 ;; then assign to named variables in order
2519 (if (and vars
(nth variable-index vars
))
2520 (let ((name (car (nth variable-index vars
))))
2521 (push name clearnames
) ; clear out colnames
2524 (prog1 (setf (cddr (nth variable-index vars
))
2525 (concat (symbol-name name
) "=" (cdr pair
)))
2526 (incf variable-index
)))
2527 (error "Variable \"%s\" must be assigned a default value"
2530 (setq results
(funcall e-merge results-exclusive-groups
2533 (let ((r (cdr pair
)))
2534 (if (stringp r
) r
(eval r
)))))))
2537 (setq results
(funcall e-merge results-exclusive-groups
2539 (unless (or (member "both" exports
)
2540 (member "none" exports
)
2541 (member "code" exports
))
2542 (setq exports
(funcall e-merge exports-exclusive-groups
2543 exports
'("results"))))
2544 (setq params
(cons pair
(assq-delete-all (car pair
) params
)))))
2547 (setq results
(funcall e-merge results-exclusive-groups
2549 (unless (or (member "both" exports
)
2550 (member "none" exports
)
2551 (member "code" exports
))
2552 (setq exports
(funcall e-merge exports-exclusive-groups
2553 exports
'("results"))))
2554 (setq params
(cons pair
(assq-delete-all (car pair
) params
)))))
2556 (setq exports
(funcall e-merge exports-exclusive-groups
2558 (split-string (or (cdr pair
) "")))))
2559 (:tangle
;; take the latest -- always overwrite
2560 (setq tangle
(or (list (cdr pair
)) tangle
)))
2562 (setq noweb
(funcall e-merge
2563 '(("yes" "no" "tangle" "no-export"
2564 "strip-export" "eval"))
2566 (split-string (or (cdr pair
) "")))))
2568 (setq cache
(funcall e-merge
'(("yes" "no")) cache
2569 (split-string (or (cdr pair
) "")))))
2571 (setq padline
(funcall e-merge
'(("yes" "no")) padline
2572 (split-string (or (cdr pair
) "")))))
2573 (:shebang
;; take the latest -- always overwrite
2574 (setq shebang
(or (list (cdr pair
)) shebang
)))
2576 (setq comments
(funcall e-merge
'(("yes" "no")) comments
2577 (split-string (or (cdr pair
) "")))))
2578 (t ;; replace: this covers e.g. :session
2579 (setq params
(cons pair
(assq-delete-all (car pair
) params
))))))
2582 (setq vars
(reverse vars
))
2583 (while vars
(setq params
(cons (cons :var
(cddr (pop vars
))) params
)))
2584 ;; clear out col-names and row-names for replaced variables
2589 (when (assoc param params
)
2590 (setf (cdr (assoc param params
))
2591 (org-remove-if (lambda (pair) (equal (car pair
) name
))
2592 (cdr (assoc param params
))))
2593 (setf params
(org-remove-if (lambda (pair) (and (equal (car pair
) param
)
2596 (list :colname-names
:rowname-names
)))
2600 (let ((key (intern (concat ":" (symbol-name hd
))))
2602 (setf params
(cons (cons key
(mapconcat 'identity val
" ")) params
))))
2603 '(results exports tangle noweb padline cache shebang comments
))
2606 (defvar org-babel-use-quick-and-dirty-noweb-expansion nil
2607 "Set to true to use regular expressions to expand noweb references.
2608 This results in much faster noweb reference expansion but does
2609 not properly allow code blocks to inherit the \":noweb-ref\"
2610 header argument from buffer or subtree wide properties.")
2612 (defun org-babel-noweb-p (params context
)
2613 "Check if PARAMS require expansion in CONTEXT.
2614 CONTEXT may be one of :tangle, :export or :eval."
2616 (intersect (lambda (as bs
)
2618 (if (member (car as
) bs
)
2620 (funcall intersect
(cdr as
) bs
))))))
2621 (funcall intersect
(case context
2622 (:tangle
'("yes" "tangle" "no-export" "strip-export"))
2623 (:eval
'("yes" "no-export" "strip-export" "eval"))
2625 (split-string (or (cdr (assoc :noweb params
)) "")))))
2627 (defun org-babel-expand-noweb-references (&optional info parent-buffer
)
2628 "Expand Noweb references in the body of the current source code block.
2630 For example the following reference would be replaced with the
2631 body of the source-code block named `example-block'.
2635 Note that any text preceding the <<foo>> construct on a line will
2636 be interposed between the lines of the replacement text. So for
2637 example if <<foo>> is placed behind a comment, then the entire
2638 replacement text will also be commented.
2640 This function must be called from inside of the buffer containing
2641 the source-code block which holds BODY.
2643 In addition the following syntax can be used to insert the
2644 results of evaluating the source-code block named `example-block'.
2648 Any optional arguments can be passed to example-block by placing
2649 the arguments inside the parenthesis following the convention
2650 defined by `org-babel-lob'. For example
2652 <<example-block(a=9)>>
2654 would set the value of argument \"a\" equal to \"9\". Note that
2655 these arguments are not evaluated in the current source-code
2656 block but are passed literally to the \"example-block\"."
2657 (let* ((parent-buffer (or parent-buffer
(current-buffer)))
2658 (info (or info
(org-babel-get-src-block-info 'light
)))
2661 (ob-nww-start org-babel-noweb-wrap-start
)
2662 (ob-nww-end org-babel-noweb-wrap-end
)
2663 (comment (string= "noweb" (cdr (assoc :comments
(nth 2 info
)))))
2664 (rx-prefix (concat "\\(" org-babel-src-name-regexp
"\\|"
2665 ":noweb-ref[ \t]+" "\\)"))
2667 (nb-add (lambda (text) (setq new-body
(concat new-body text
))))
2668 (c-wrap (lambda (text)
2670 (funcall (intern (concat lang
"-mode")))
2671 (comment-region (point) (progn (insert text
) (point)))
2672 (org-babel-trim (buffer-string)))))
2673 index source-name evaluate prefix
)
2675 (org-set-local 'org-babel-noweb-wrap-start ob-nww-start
)
2676 (org-set-local 'org-babel-noweb-wrap-end ob-nww-end
)
2677 (insert body
) (goto-char (point-min))
2678 (setq index
(point))
2679 (while (and (re-search-forward (org-babel-noweb-wrap) nil t
))
2680 (save-match-data (setf source-name
(match-string 1)))
2681 (save-match-data (setq evaluate
(string-match "(.*)" source-name
)))
2684 (buffer-substring (match-beginning 0)
2686 (beginning-of-line 1) (point)))))
2687 ;; add interval to new-body (removing noweb reference)
2688 (goto-char (match-beginning 0))
2689 (funcall nb-add
(buffer-substring index
(point)))
2690 (goto-char (match-end 0))
2691 (setq index
(point))
2694 (with-current-buffer parent-buffer
2697 (mapconcat ;; Interpose PREFIX between every line.
2701 (let ((raw (org-babel-ref-resolve source-name
)))
2702 (if (stringp raw
) raw
(format "%S" raw
)))
2704 ;; Retrieve from the library of babel.
2705 (nth 2 (assoc (intern source-name
)
2706 org-babel-library-of-babel
))
2707 ;; Return the contents of headlines literally.
2709 (when (org-babel-ref-goto-headline-id source-name
)
2710 (org-babel-ref-headline-body)))
2711 ;; Find the expansion of reference in this buffer.
2712 (let ((rx (concat rx-prefix source-name
"[ \t\n]"))
2715 (goto-char (point-min))
2716 (if org-babel-use-quick-and-dirty-noweb-expansion
2717 (while (re-search-forward rx nil t
)
2718 (let* ((i (org-babel-get-src-block-info 'light
))
2719 (body (org-babel-expand-noweb-references i
))
2720 (sep (or (cdr (assoc :noweb-sep
(nth 2 i
)))
2723 (let ((cs (org-babel-tangle-comment-links i
)))
2724 (concat (funcall c-wrap
(car cs
)) "\n"
2726 (funcall c-wrap
(cadr cs
))))
2728 (setq expansion
(cons sep
(cons full expansion
)))))
2729 (org-babel-map-src-blocks nil
2730 (let ((i (org-babel-get-src-block-info 'light
)))
2731 (when (equal (or (cdr (assoc :noweb-ref
(nth 2 i
)))
2734 (let* ((body (org-babel-expand-noweb-references i
))
2735 (sep (or (cdr (assoc :noweb-sep
(nth 2 i
)))
2738 (let ((cs (org-babel-tangle-comment-links i
)))
2739 (concat (funcall c-wrap
(car cs
)) "\n"
2741 (funcall c-wrap
(cadr cs
))))
2744 (cons sep
(cons full expansion
)))))))))
2746 (mapconcat #'identity
(nreverse (cdr expansion
)) "")))
2747 ;; Possibly raise an error if named block doesn't exist.
2748 (if (or org-babel-noweb-error-all-langs
2749 (member lang org-babel-noweb-error-langs
))
2751 (org-babel-noweb-wrap source-name
)
2752 "could not be resolved (see "
2753 "`org-babel-noweb-error-langs')"))
2755 "[\n\r]") (concat "\n" prefix
))))))
2756 (funcall nb-add
(buffer-substring index
(point-max))))
2759 (defun org-babel--script-escape-inner (str)
2760 (let (in-single in-double backslash out
)
2767 (setq backslash nil
)
2769 ((and in-single
(eq ch ?
'))
2770 ;; Escaped single quote inside single quoted string:
2771 ;; emit just a single quote, since we've changed the
2772 ;; outer quotes to double.
2775 ;; Escaped double quote
2777 ;; This should be interpreted as backslash+quote,
2778 ;; not an escape. Emit a three backslashes
2779 ;; followed by a quote (because one layer of
2780 ;; quoting will be stripped by `org-babel-read').
2781 (append (list ch ?
\\ ?
\\ ?
\\) out
)
2782 ;; Otherwise we are in a double-quoted string. Emit
2783 ;; a single escaped quote
2784 (append (list ch ?
\\) out
)))
2786 ;; Escaped backslash: emit a single escaped backslash
2787 (append (list ?
\\ ?
\\) out
))
2788 ;; Other: emit a quoted backslash followed by whatever
2789 ;; the character was (because one layer of quoting will
2790 ;; be stripped by `org-babel-read').
2791 (t (append (list ch ?
\\ ?
\\) out
))))
2793 (?\
[ (if (or in-double in-single
)
2796 (?\
] (if (or in-double in-single
)
2799 (?\
{ (if (or in-double in-single
)
2802 (?\
} (if (or in-double in-single
)
2805 (?
, (if (or in-double in-single
)
2806 (cons ?
, out
) (cons ?\s out
)))
2809 (setq in-single
(not in-single
)) (cons ?
\" out
)))
2811 (append (list ?
\" ?
\\) out
)
2812 (setq in-double
(not in-double
)) (cons ?
\" out
)))
2813 (?
\\ (unless (or in-single in-double
)
2814 (error "Can't handle backslash outside string in `org-babel-script-escape'"))
2817 (t (cons ch out
))))))
2818 (string-to-list str
))
2819 (when (or in-single in-double
)
2820 (error "Unterminated string in `org-babel-script-escape'"))
2821 (apply #'string
(reverse out
))))
2823 (defun org-babel-script-escape (str &optional force
)
2824 "Safely convert tables into elisp lists."
2825 (unless (stringp str
)
2826 (error "`org-babel-script-escape' expects a string"))
2829 ((and (> (length str
) 2)
2830 (or (and (string-equal "[" (substring str
0 1))
2831 (string-equal "]" (substring str -
1)))
2832 (and (string-equal "{" (substring str
0 1))
2833 (string-equal "}" (substring str -
1)))
2834 (and (string-equal "(" (substring str
0 1))
2835 (string-equal ")" (substring str -
1)))))
2837 (concat "'" (org-babel--script-escape-inner str
)))
2839 (and (> (length str
) 2)
2840 (or (and (string-equal "'" (substring str
0 1))
2841 (string-equal "'" (substring str -
1)))
2842 ;; We need to pass double-quoted strings
2843 ;; through the backslash-twiddling bits, even
2844 ;; though we don't need to change their
2846 (and (string-equal "\"" (substring str
0 1))
2847 (string-equal "\"" (substring str -
1))))))
2848 (org-babel--script-escape-inner str
))
2850 (condition-case nil
(org-babel-read escaped
) (error escaped
))))
2852 (defun org-babel-read (cell &optional inhibit-lisp-eval
)
2853 "Convert the string value of CELL to a number if appropriate.
2854 Otherwise if CELL looks like lisp (meaning it starts with a
2855 \"(\", \"\\='\", \"\\=`\" or a \"[\") then read and evaluate it as
2856 lisp, otherwise return it unmodified as a string. Optional
2857 argument INHIBIT-LISP-EVAL inhibits lisp evaluation for
2858 situations in which is it not appropriate."
2859 (if (and (stringp cell
) (not (equal cell
"")))
2860 (or (org-babel-number-p cell
)
2861 (if (and (not inhibit-lisp-eval
)
2862 (or (member (substring cell
0 1) '("(" "'" "`" "["))
2863 (string= cell
"*this*")))
2865 (if (string= (substring cell
0 1) "\"")
2867 (progn (set-text-properties 0 (length cell
) nil cell
) cell
))))
2870 (defun org-babel-number-p (string)
2871 "If STRING represents a number return its value."
2872 (if (and (string-match "[0-9]+" string
)
2873 (string-match "^-?[0-9]*\\.?[0-9]*$" string
)
2874 (= (length (substring string
(match-beginning 0)
2877 (string-to-number string
)))
2879 (defun org-babel-import-elisp-from-file (file-name &optional separator
)
2880 "Read the results located at FILE-NAME into an elisp table.
2881 If the table is trivial, then return it as a scalar."
2883 (save-window-excursion
2887 (org-table-import file-name separator
)
2888 (delete-file file-name
)
2889 (setq result
(mapcar (lambda (row)
2890 (mapcar #'org-babel-string-read row
))
2891 (org-table-to-lisp))))
2892 (error (message "Error reading results: %s" err
) nil
)))
2893 (if (null (cdr result
)) ;; if result is trivial vector, then scalarize it
2894 (if (consp (car result
))
2895 (if (null (cdr (car result
)))
2901 (defun org-babel-string-read (cell)
2902 "Strip nested \"s from around strings."
2903 (org-babel-read (or (and (stringp cell
)
2904 (string-match "\\\"\\(.+\\)\\\"" cell
)
2905 (match-string 1 cell
))
2908 (defun org-babel-chomp (string &optional regexp
)
2909 "Strip a trailing space or carriage return from STRING.
2910 The default regexp used is \"[ \\f\\t\\n\\r\\v]\" but another one
2911 can be specified as the REGEXP argument."
2912 (let ((regexp (or regexp
"[ \f\t\n\r\v]")))
2913 (while (and (> (length string
) 0)
2914 (string-match regexp
(substring string -
1)))
2915 (setq string
(substring string
0 -
1)))
2918 (defun org-babel-trim (string &optional regexp
)
2919 "Strip a leading and trailing space or carriage return from STRING.
2920 Like `org-babel-chomp', but run on both the first and last
2921 character of the string."
2924 (org-babel-chomp (org-reverse-string string
) regexp
)) regexp
))
2926 (defun org-babel-tramp-handle-call-process-region
2927 (start end program
&optional delete buffer display
&rest args
)
2928 "Use Tramp to handle `call-process-region'.
2929 Fixes a bug in `tramp-handle-call-process-region'."
2930 (if (and (featurep 'tramp
) (file-remote-p default-directory
))
2931 (let ((tmpfile (tramp-compat-make-temp-file "")))
2932 (write-region start end tmpfile
)
2933 (when delete
(delete-region start end
))
2935 ;; (apply 'call-process program tmpfile buffer display args)
2937 (apply 'process-file program tmpfile buffer display args
)
2938 (delete-file tmpfile
)))
2939 ;; org-babel-call-process-region-original is the original emacs
2940 ;; definition. It is in scope from the let binding in
2941 ;; org-babel-execute-src-block
2942 (apply org-babel-call-process-region-original
2943 start end program delete buffer display args
)))
2945 (defun org-babel-local-file-name (file)
2946 "Return the local name component of FILE."
2947 (or (file-remote-p file
'localname
) file
))
2949 (defun org-babel-process-file-name (name &optional no-quote-p
)
2950 "Prepare NAME to be used in an external process.
2951 If NAME specifies a remote location, the remote portion of the
2952 name is removed, since in that case the process will be executing
2953 remotely. The file name is then processed by `expand-file-name'.
2954 Unless second argument NO-QUOTE-P is non-nil, the file name is
2955 additionally processed by `shell-quote-argument'"
2956 (let ((f (org-babel-local-file-name (expand-file-name name
))))
2957 (if no-quote-p f
(shell-quote-argument f
))))
2959 (defvar org-babel-temporary-directory
)
2960 (unless (or noninteractive
(boundp 'org-babel-temporary-directory
))
2961 (defvar org-babel-temporary-directory
2962 (or (and (boundp 'org-babel-temporary-directory
)
2963 (file-exists-p org-babel-temporary-directory
)
2964 org-babel-temporary-directory
)
2965 (make-temp-file "babel-" t
))
2966 "Directory to hold temporary files created to execute code blocks.
2967 Used by `org-babel-temp-file'. This directory will be removed on
2970 (defcustom org-babel-remote-temporary-directory
"/tmp/"
2971 "Directory to hold temporary files on remote hosts."
2975 (defmacro org-babel-result-cond
(result-params scalar-form
&rest table-forms
)
2976 "Call the code to parse raw string results according to RESULT-PARAMS."
2978 (debug (form form
&rest form
)))
2979 (org-with-gensyms (params)
2980 `(let ((,params
,result-params
))
2981 (unless (member "none" ,params
)
2982 (if (or (member "scalar" ,params
)
2983 (member "verbatim" ,params
)
2984 (member "html" ,params
)
2985 (member "code" ,params
)
2986 (member "pp" ,params
)
2987 (member "file" ,params
)
2988 (and (or (member "output" ,params
)
2989 (member "raw" ,params
)
2990 (member "org" ,params
)
2991 (member "drawer" ,params
))
2992 (not (member "table" ,params
))))
2995 (def-edebug-spec org-babel-result-cond
(form form body
))
2997 (defun org-babel-temp-file (prefix &optional suffix
)
2998 "Create a temporary file in the `org-babel-temporary-directory'.
2999 Passes PREFIX and SUFFIX directly to `make-temp-file' with the
3000 value of `temporary-file-directory' temporarily set to the value
3001 of `org-babel-temporary-directory'."
3002 (if (file-remote-p default-directory
)
3004 (concat (file-remote-p default-directory
)
3006 prefix org-babel-remote-temporary-directory
))))
3007 (make-temp-file prefix nil suffix
))
3008 (let ((temporary-file-directory
3009 (or (and (boundp 'org-babel-temporary-directory
)
3010 (file-exists-p org-babel-temporary-directory
)
3011 org-babel-temporary-directory
)
3012 temporary-file-directory
)))
3013 (make-temp-file prefix nil suffix
))))
3015 (defun org-babel-remove-temporary-directory ()
3016 "Remove `org-babel-temporary-directory' on Emacs shutdown."
3017 (when (and (boundp 'org-babel-temporary-directory
)
3018 (file-exists-p org-babel-temporary-directory
))
3019 ;; taken from `delete-directory' in files.el
3022 (mapc (lambda (file)
3023 ;; This test is equivalent to
3024 ;; (and (file-directory-p fn) (not (file-symlink-p fn)))
3025 ;; but more efficient
3026 (if (eq t
(car (file-attributes file
)))
3027 (delete-directory file
)
3028 (delete-file file
)))
3029 ;; We do not want to delete "." and "..".
3030 (directory-files org-babel-temporary-directory
'full
3031 "^\\([^.]\\|\\.\\([^.]\\|\\..\\)\\).*"))
3032 (delete-directory org-babel-temporary-directory
))
3034 (message "Failed to remove temporary Org-babel directory %s"
3035 (if (boundp 'org-babel-temporary-directory
)
3036 org-babel-temporary-directory
3037 "[directory not defined]"))))))
3039 (add-hook 'kill-emacs-hook
'org-babel-remove-temporary-directory
)
3041 (defun org-babel-one-header-arg-safe-p (pair safe-list
)
3042 "Determine if the PAIR is a safe babel header arg according to SAFE-LIST.
3044 For the format of SAFE-LIST, see `org-babel-safe-header-args'."
3046 (keywordp (car pair
))
3047 (stringp (cdr pair
))
3049 (memq (car pair
) safe-list
)
3050 (let ((entry (assq (car pair
) safe-list
)))
3053 (cond ((functionp (cdr entry
))
3054 (funcall (cdr entry
) (cdr pair
)))
3055 ((listp (cdr entry
))
3056 (member (cdr pair
) (cdr entry
)))
3059 (defun org-babel-generate-file-param (src-name params
)
3060 "Calculate the filename for source block results.
3062 The directory is calculated from the :output-dir property of the
3063 source block; if not specified, use the current directory.
3065 If the source block has a #+NAME and the :file parameter does not
3066 contain any period characters, then the :file parameter is
3067 treated as an extension, and the output file name is the
3068 concatenation of the directory (as calculated above), the block
3069 name, a period, and the parameter value as a file extension.
3070 Otherwise, the :file parameter is treated as a full file name,
3071 and the output file name is the directory (as calculated above)
3072 plus the parameter value."
3073 (let* ((file-cons (assq :file params
))
3074 (file-ext-cons (assq :file-ext params
))
3075 (file-ext (cdr-safe file-ext-cons
))
3076 (dir (cdr-safe (assq :output-dir params
)))
3078 ;; create the output-dir if it does not exist
3080 (make-directory dir t
))
3082 ;; :file given; add :output-dir if given
3084 (setcdr file-cons
(concat (file-name-as-directory dir
) (cdr file-cons
))))
3085 ;; :file not given; compute from name and :file-ext if possible
3086 (when (and src-name file-ext
)
3088 (setq fname
(concat (file-name-as-directory (or dir
""))
3089 src-name
"." file-ext
))
3090 (setq fname
(concat src-name
"." file-ext
)))
3091 (setq params
(cons (cons :file fname
) params
))))
3094 ;;; Used by backends: R, Maxima, Octave.
3095 (defun org-babel-graphical-output-file (params)
3096 "File where a babel block should send graphical output, per PARAMS."
3097 (unless (assq :file params
)
3098 (if (assq :file-ext params
)
3099 (user-error ":file-ext given but no :file generated; did you forget to give a block a #+NAME?")
3100 (user-error "No :file header argument given; cannot create graphical result.")))
3101 (and (member "graphics" (cdr (assq :result-params params
)))
3102 (cdr (assq :file params
))))
3107 ;; generated-autoload-file: "org-loaddefs.el"
3110 ;;; ob-core.el ends here
