lisp/ob-sh.el

   1 ;;; ob-sh.el --- org-babel functions for shell evaluation
   2
   3 ;; Copyright (C) 2009, 2010  Free Software Foundation, Inc.
   4
   5 ;; Author: Eric Schulte
   6 ;; Keywords: literate programming, reproducible research
   7 ;; Homepage: http://orgmode.org
   8 ;; Version: 7.3
   9
  10 ;; This file is part of GNU Emacs.
  11
  12 ;; GNU Emacs is free software: you can redistribute it and/or modify
  13 ;; it under the terms of the GNU General Public License as published by
  14 ;; the Free Software Foundation, either version 3 of the License, or
  15 ;; (at your option) any later version.
  16
  17 ;; GNU Emacs is distributed in the hope that it will be useful,
  18 ;; but WITHOUT ANY WARRANTY; without even the implied warranty of
  19 ;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  20 ;; GNU General Public License for more details.
  21
  22 ;; You should have received a copy of the GNU General Public License
  23 ;; along with GNU Emacs.  If not, see <http://www.gnu.org/licenses/>.
  24
  25 ;;; Commentary:
  26
  27 ;; Org-Babel support for evaluating shell source code.
  28
  29 ;;; Code:
  30 (require 'ob)
  31 (require 'ob-comint)
  32 (require 'ob-eval)
  33 (require 'shell)
  34 (eval-when-compile (require 'cl))
  35
  36 (declare-function org-babel-comint-in-buffer "ob-comint" (buffer &rest body))
  37 (declare-function org-babel-comint-wait-for-output "ob-comint" (buffer))
  38 (declare-function org-babel-comint-buffer-livep "ob-comint" (buffer))
  39 (declare-function org-babel-comint-with-output "ob-comint" (meta &rest body))
  40 (declare-function orgtbl-to-generic "org-table" (table params))
  41
  42 (defvar org-babel-default-header-args:sh '())
  43
  44 (defvar org-babel-sh-command "sh"
  45   "Command used to invoke a shell.
  46 This will be passed to  `shell-command-on-region'")
  47
  48 (defun org-babel-execute:sh (body params)
  49   "Execute a block of Shell commands with Babel.
  50 This function is called by `org-babel-execute-src-block'."
  51   (let* ((session (org-babel-sh-initiate-session
  52                    (cdr (assoc :session params))))
  53          (result-params (cdr (assoc :result-params params)))
  54          (full-body (org-babel-expand-body:generic
  55                      body params (org-babel-variable-assignments:sh params))))
  56     (org-babel-reassemble-table
  57      (org-babel-sh-evaluate session full-body result-params)
  58      (org-babel-pick-name
  59       (cdr (assoc :colname-names params)) (cdr (assoc :colnames params)))
  60      (org-babel-pick-name
  61       (cdr (assoc :rowname-names params)) (cdr (assoc :rownames params))))))
  62
  63 (defun org-babel-prep-session:sh (session params)
  64   "Prepare SESSION according to the header arguments specified in PARAMS."
  65   (let* ((session (org-babel-sh-initiate-session session))
  66          (var-lines (org-babel-variable-assignments:sh params)))
  67     (org-babel-comint-in-buffer session
  68       (mapc (lambda (var)
  69               (insert var) (comint-send-input nil t)
  70               (org-babel-comint-wait-for-output session)) var-lines))
  71     session))
  72
  73 (defun org-babel-load-session:sh (session body params)
  74   "Load BODY into SESSION."
  75   (save-window-excursion
  76     (let ((buffer (org-babel-prep-session:sh session params)))
  77       (with-current-buffer buffer
  78         (goto-char (process-mark (get-buffer-process (current-buffer))))
  79         (insert (org-babel-chomp body)))
  80       buffer)))
  81
  82 ;; helper functions
  83
  84 (defun org-babel-variable-assignments:sh (params)
  85   "Return list of shell statements assigning the block's variables"
  86   (let ((sep (cdr (assoc :separator params))))
  87     (mapcar
  88      (lambda (pair)
  89        (format "%s=%s"
  90                (car pair)
  91                (org-babel-sh-var-to-sh (cdr pair) sep)))
  92      (mapcar #'cdr (org-babel-get-header params :var)))))
  93
  94 (defun org-babel-sh-var-to-sh (var &optional sep)
  95   "Convert an elisp value to a shell variable.
  96 Convert an elisp var into a string of shell commands specifying a
  97 var of the same value."
  98   (if (listp var)
  99       (flet ((deep-string (el)
 100                           (if (listp el)
 101                               (mapcar #'deep-string el)
 102                             (org-babel-sh-var-to-sh el sep))))
 103         (format "$(cat <<BABEL_TABLE\n%s\nBABEL_TABLE\n)"
 104                 (orgtbl-to-generic
 105                  (deep-string (if (listp (car var)) var (list var)))
 106                  (list :sep (or sep "\t")))))
 107     (if (stringp var)
 108         (if (string-match "[\n\r]" var)
 109             (format "$(cat <<BABEL_STRING\n%s\nBABEL_STRING\n)" var)
 110           (format "%s" var))
 111       (format "%S" var))))
 112
 113 (defun org-babel-sh-table-or-results (results)
 114   "Convert RESULTS to an appropriate elisp value.
 115 If the results look like a table, then convert them into an
 116 Emacs-lisp table, otherwise return the results as a string."
 117   (org-babel-read
 118    (if (string-match "^\\[.+\\]$" results)
 119        (org-babel-read
 120         (concat "'"
 121                 (replace-regexp-in-string
 122                  "\\[" "(" (replace-regexp-in-string
 123                             "\\]" ")" (replace-regexp-in-string
 124                                        ", " " " (replace-regexp-in-string
 125                                                  "'" "\"" results))))))
 126      results)))
 127
 128 (defun org-babel-sh-initiate-session (&optional session params)
 129   "Initiate a session named SESSION according to PARAMS."
 130   (when (and session (not (string= session "none")))
 131     (save-window-excursion
 132       (or (org-babel-comint-buffer-livep session)
 133           (progn (shell session) (get-buffer (current-buffer)))))))
 134
 135 (defvar org-babel-sh-eoe-indicator "echo 'org_babel_sh_eoe'"
 136   "String to indicate that evaluation has completed.")
 137 (defvar org-babel-sh-eoe-output "org_babel_sh_eoe"
 138   "String to indicate that evaluation has completed.")
 139
 140 (defun org-babel-sh-evaluate (session body &optional result-params)
 141   "Pass BODY to the Shell process in BUFFER.
 142 If RESULT-TYPE equals 'output then return a list of the outputs
 143 of the statements in BODY, if RESULT-TYPE equals 'value then
 144 return the value of the last statement in BODY."
 145   ((lambda (results)
 146      (when results
 147        (if (or (member "scalar" result-params)
 148                (member "output" result-params))
 149            results
 150          (let ((tmp-file (org-babel-temp-file "sh-")))
 151            (with-temp-file tmp-file (insert results))
 152            (org-babel-import-elisp-from-file tmp-file)))))
 153    (if (not session)
 154        (org-babel-eval org-babel-sh-command (org-babel-trim body))
 155      (mapconcat
 156       #'org-babel-sh-strip-weird-long-prompt
 157       (mapcar
 158        #'org-babel-trim
 159        (butlast
 160         (org-babel-comint-with-output
 161             (session org-babel-sh-eoe-output t body)
 162           (mapc
 163            (lambda (line)
 164              (insert line) (comint-send-input nil t) (sleep-for 0.25))
 165            (append
 166             (split-string (org-babel-trim body) "\n")
 167             (list org-babel-sh-eoe-indicator))))
 168         2)) "\n"))))
 169
 170 (defun org-babel-sh-strip-weird-long-prompt (string)
 171   "Remove prompt cruft from a string of shell output."
 172   (while (string-match "^% +[\r\n$]+ *" string)
 173     (setq string (substring string (match-end 0))))
 174   string)
 175
 176 (provide 'ob-sh)
 177
 178 ;; arch-tag: 416dd531-c230-4b0a-a5bf-8d948f990f2d
 179
 180 ;;; ob-sh.el ends here