A freeze group can now be allowed to move rigidly in some dimension by using "freezed...
[gromacs/rigid-bodies.git] / include / gmx_ana.h
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35 #ifndef _gmx_ana_h
36 #define _gmx_ana_h
38 #ifdef __cplusplus
39 extern "C" {
40 #endif
42 int
43 gmx_analyze(int argc,char *argv[]);
45 int
46 gmx_anaeig(int argc,char *argv[]);
48 int
49 gmx_g_angle(int argc,char *argv[]);
51 int
52 gmx_bar(int argc,char *argv[]);
54 int
55 gmx_bond(int argc,char *argv[]);
57 int
58 gmx_bundle(int argc,char *argv[]);
60 int
61 gmx_chi(int argc,char *argv[]);
63 int
64 gmx_cluster(int argc,char *argv[]);
66 int
67 gmx_confrms(int argc,char *argv[]);
69 int
70 gmx_covar(int argc,char *argv[]);
72 int
73 gmx_current(int argc,char *argv[]);
75 int
76 gmx_density(int argc,char *argv[]);
78 int
79 gmx_densmap(int argc,char *argv[]);
81 int
82 gmx_dielectric(int argc,char *argv[]);
84 int
85 gmx_dih(int argc,char *argv[]);
87 int
88 gmx_dipoles(int argc,char *argv[]);
90 int
91 gmx_disre(int argc,char *argv[]);
93 int
94 gmx_dist(int argc,char *argv[]);
96 int
97 gmx_dyndom(int argc,char *argv[]);
99 int
100 gmx_editconf(int argc, char *argv[]);
102 int
103 gmx_eneconv(int argc,char *argv[]);
105 int
106 gmx_enemat(int argc,char *argv[]);
108 int
109 gmx_energy(int argc,char *argv[]);
111 int
112 gmx_lie(int argc,char *argv[]);
114 int
115 gmx_filter(int argc,char *argv[]);
117 int
118 gmx_genbox(int argc,char *argv[]);
120 int
121 gmx_genconf(int argc,char *argv[]);
123 int
124 gmx_genion(int argc,char *argv[]);
126 int
127 gmx_genpr(int argc,char *argv[]);
129 int
130 gmx_gyrate(int argc,char *argv[]);
132 int
133 gmx_h2order(int argc,char *argv[]);
135 int
136 gmx_hbond(int argc,char *argv[]);
138 int
139 gmx_helix(int argc,char *argv[]);
142 gmx_helixorient(int argc,char *argv[]);
144 int
145 gmx_kinetics(int argc,char *argv[]);
147 int
148 gmx_mindist(int argc,char *argv[]);
150 int
151 gmx_msd(int argc,char *argv[]);
153 int
154 gmx_morph(int argc,char *argv[]);
156 int
157 gmx_nmeig(int argc,char *argv[]);
159 int
160 gmx_nmens(int argc,char *argv[]);
162 int
163 gmx_nmtraj(int argc,char *argv[]);
165 int
166 gmx_order(int argc,char *argv[]);
168 int
169 gmx_polystat(int argc,char *argv[]);
171 int
172 gmx_potential(int argc,char *argv[]);
175 gmx_principal(int argc,char *argv[]);
177 int
178 gmx_rama(int argc,char *argv[]);
180 int
181 gmx_rdf(int argc,char *argv[]);
183 int
184 gmx_rotmat(int argc,char *argv[]);
186 int
187 gmx_rms(int argc,char *argv[]);
189 int
190 gmx_rmsdist(int argc,char *argv[]);
192 int
193 gmx_rmsf(int argc,char *argv[]);
195 int
196 gmx_rotacf(int argc,char *argv[]);
198 int
199 gmx_saltbr(int argc,char *argv[]);
201 int
202 gmx_sas(int argc,char *argv[]);
204 int
205 gmx_sdf(int argc,char *argv[]);
207 int
208 gmx_select(int argc,char *argv[]);
210 int
211 gmx_sgangle(int argc,char *argv[]);
213 int
214 gmx_sham(int argc,char *argv[]);
216 int
217 gmx_sorient(int argc,char *argv[]);
219 int
220 gmx_spol(int argc,char *argv[]);
222 int
223 gmx_spatial(int argc,char *argv[]);
225 int
226 gmx_tcaf(int argc,char *argv[]);
228 int
229 gmx_traj(int argc,char *argv[]);
232 gmx_trjcat(int argc,char *argv[]);
234 int
235 gmx_trjconv(int argc,char *argv[]);
237 int
238 gmx_trjorder(int argc,char *argv[]);
240 int
241 gmx_tune_pme(int argc,char *argv[]);
243 int
244 gmx_velacc(int argc,char *argv[]);
246 int
247 gmx_clustsize(int argc,char *argv[]);
249 int
250 gmx_mdmat(int argc,char *argv[]);
252 int
253 gmx_vanhove(int argc,char *argv[]);
255 int
256 gmx_wham(int argc,char *argv[]);
258 int
259 gmx_wheel(int argc,char *argv[]);
261 int
262 gmx_xpm2ps(int argc,char *argv[]);
264 int
265 gmx_membed(int argc,char *argv[]);
267 int
268 gmx_pme_error(int argc,char *argv[]);
271 gmx_options(int argc,char *argv[]);
273 #ifdef __cplusplus
275 #endif
277 #endif
278 /* _gmx_ana_h */