src/kernel/CMakeLists.txt

   1
   2 set(GMXPREPROCESS_SOURCES
   3     add_par.c
   4     compute_io.c
   5     convparm.c
   6     gen_ad.c
   7     gen_vsite.c
   8     genhydro.c
   9     gpp_atomtype.c
  10     gpp_bond_atomtype.c
  11     h_db.c
  12     hackblock.c
  13     hizzie.c
  14     nm2type.c
  15     pdb2top.c
  16     pgutil.c
  17     readir.c
  18     readpull.c
  19     resall.c
  20     sorting.c
  21     specbond.c
  22     ter_db.c
  23     tomorse.c
  24     topdirs.c
  25     topexcl.c
  26     topio.c
  27     toppush.c
  28     topshake.c
  29     toputil.c
  30     tpbcmp.c
  31     vsite_parm.c
  32     xlate.c)
  33
  34 set(MDRUN_SOURCES
  35     gctio.c    ionize.c runner.c
  36     do_gct.c     repl_ex.c  xutils.c
  37     md.c         mdrun.c    genalg.c md_openmm.c)
  38
  39 add_library(gmxpreprocess ${GMXPREPROCESS_SOURCES})
  40 target_link_libraries(gmxpreprocess md)
  41
  42 if(GMX_OPENMM)
  43     add_subdirectory(gmx_gpu_utils)
  44     include_directories(./gmx_gpu_utils ${OpenMM_INCLUDE_DIR})
  45     link_directories(${OpenMM_LIBRARY_DIR})
  46     add_definitions( -DOPENMM_PLUGIN_DIR="${OpenMM_PLUGIN_DIR}" )
  47     add_library(openmm_api_wrapper openmm_wrapper.cpp)
  48 #    remove_definitions( -DOPENMM_PLUGIN_DIR="${OpenMM_PLUGIN_DIR}" )  # TODO where should this go?!
  49     set(GMX_OPENMM_LIBRARIES openmm_api_wrapper gmx_gpu_utils OpenMM)
  50     install(TARGETS openmm_api_wrapper gmx_gpu_utils DESTINATION ${LIB_INSTALL_DIR})
  51 endif(GMX_OPENMM)
  52
  53 if(GMX_FAHCORE)
  54   add_library(fahcore ${MDRUN_SOURCES})
  55 else(GMX_FAHCORE)
  56
  57 list(APPEND GMX_EXTRA_LIBRARIES gmxpreprocess md)
  58
  59 add_executable(grompp grompp.c)
  60 target_link_libraries(grompp ${GMX_EXTRA_LIBRARIES})
  61
  62 add_executable(tpbconv tpbconv.c)
  63 target_link_libraries(tpbconv ${GMX_EXTRA_LIBRARIES})
  64
  65 add_executable(pdb2gmx pdb2gmx.c)
  66 target_link_libraries(pdb2gmx ${GMX_EXTRA_LIBRARIES})
  67
  68 add_executable(protonate protonate.c)
  69 target_link_libraries(protonate ${GMX_EXTRA_LIBRARIES})
  70
  71 add_executable(luck luck.c)
  72 target_link_libraries(luck ${GMX_EXTRA_LIBRARIES})
  73
  74 add_executable(gmxdump gmxdump.c)
  75 target_link_libraries(gmxdump ${GMX_EXTRA_LIBRARIES})
  76
  77 add_executable(x2top x2top.c)
  78 target_link_libraries(x2top ${GMX_EXTRA_LIBRARIES})
  79
  80 add_executable(gmxcheck gmxcheck.c)
  81 target_link_libraries(gmxcheck ${GMX_EXTRA_LIBRARIES})
  82
  83 add_executable(mdrun ${MDRUN_SOURCES})
  84 target_link_libraries(mdrun ${GMX_EXTRA_LIBRARIES} ${GMX_OPENMM_LIBRARIES})
  85
  86 install(TARGETS
  87         grompp
  88         tpbconv
  89         pdb2gmx
  90         protonate
  91         luck
  92         gmxdump
  93         x2top
  94         gmxcheck
  95         mdrun
  96         gmxpreprocess DESTINATION ${LIB_INSTALL_DIR}
  97         RUNTIME DESTINATION ${BIN_INSTALL_DIR})
  98
  99 endif(GMX_FAHCORE)
 100