include/gmxfio.h

   1 /*
   2  *
   3  *                This source code is part of
   4  *
   5  *                 G   R   O   M   A   C   S
   6  *
   7  *          GROningen MAchine for Chemical Simulations
   8  *
   9  *                        VERSION 3.2.0
  10  * Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
  11  * Copyright (c) 1991-2000, University of Groningen, The Netherlands.
  12  * Copyright (c) 2001-2004, The GROMACS development team,
  13  * check out http://www.gromacs.org for more information.
  14
  15  * This program is free software; you can redistribute it and/or
  16  * modify it under the terms of the GNU General Public License
  17  * as published by the Free Software Foundation; either version 2
  18  * of the License, or (at your option) any later version.
  19  *
  20  * If you want to redistribute modifications, please consider that
  21  * scientific software is very special. Version control is crucial -
  22  * bugs must be traceable. We will be happy to consider code for
  23  * inclusion in the official distribution, but derived work must not
  24  * be called official GROMACS. Details are found in the README & COPYING
  25  * files - if they are missing, get the official version at www.gromacs.org.
  26  *
  27  * To help us fund GROMACS development, we humbly ask that you cite
  28  * the papers on the package - you can find them in the top README file.
  29  *
  30  * For more info, check our website at http://www.gromacs.org
  31  *
  32  * And Hey:
  33  * Gromacs Runs On Most of All Computer Systems
  34  */
  35
  36 #ifndef _gmxfio_h
  37 #define _gmxfio_h
  38
  39 #include <stdio.h>
  40 #include "sysstuff.h"
  41 #include "typedefs.h"
  42 #include "xdrf.h"
  43 #include "futil.h"
  44
  45 /* types */
  46
  47
  48 /* Enumerated for different items in files */
  49 enum { eitemHEADER, eitemIR, eitemBOX,
  50        eitemTOP, eitemX, eitemV, eitemF, eitemNR };
  51
  52 /* Enumerated for data types in files */
  53 enum { eioREAL, eioFLOAT, eioDOUBLE, eioINT, eioGMX_LARGE_INT,
  54        eioUCHAR, eioNUCHAR, eioUSHORT,
  55        eioRVEC, eioNRVEC, eioIVEC, eioSTRING, eioNR };
  56
  57 typedef struct t_fileio t_fileio;
  58
  59 extern const char *itemstr[eitemNR];
  60 extern const char *comment_str[eitemNR];
  61
  62 /* NOTE ABOUT THREAD SAFETY:
  63
  64    The functions are all thread-safe, provided that two threads don't
  65    do something silly like closing the same file, or one thread
  66    accesses a file that has been closed by another.
  67    */
  68
  69 /********************************************************
  70  * Open and Close
  71  ********************************************************/
  72
  73 t_fileio *gmx_fio_open(const char *fn,const char *mode);
  74 /* Open a new file for reading or writing.
  75  * The file type will be deduced from the file name.
  76  * If fn is NULL, stdin / stdout will be used for Ascii I/O (TPA type)
  77  * mode may be "r", "w", or "a". You should append a "b" to the mode
  78  * if you are writing a binary file, but the routine will also
  79  * doublecheck it and try to do it if you forgot. This has no effect on
  80  * unix, but is important on windows.
  81  */
  82
  83 int gmx_fio_close(t_fileio *fp);
  84 /* Close the file corresponding to fp (if not stdio)
  85  * The routine will exit when an invalid fio is handled.
  86  * Returns 0 on success.
  87  */
  88
  89 int gmx_fio_fp_close(t_fileio *fp);
  90 /* Close the file corresponding to fp without closing the FIO entry
  91  * Needed e.g. for trxio because the FIO entries are used to store
  92  * additional data.
  93  * NOTE that the fp still needs to be properly closed with gmx_fio_close().
  94  * The routine will exit when an invalid fio is handled.
  95  * Returns 0 on success.
  96  */
  97
  98
  99 /* Open a file, return a stream, record the entry in internal FIO object */
 100 FILE* gmx_fio_fopen(const char *fn,const char *mode);
 101
 102 /* Close a file previously opened with gmx_fio_fopen.
 103  * Do not mix these calls with standard fopen/fclose ones!
 104  * Returns 0 on success.  */
 105 int gmx_fio_fclose(FILE *fp);
 106
 107
 108
 109 /********************************************************
 110  * Change properties of the open file
 111  ********************************************************/
 112
 113 void gmx_fio_setprecision(t_fileio *fio,gmx_bool bDouble);
 114 /* Select the floating point precision for reading and writing files */
 115
 116 char *gmx_fio_getname(t_fileio *fio);
 117 /* Return the filename corresponding to the fio index */
 118
 119 int gmx_fio_getftp(t_fileio *fio);
 120 /* Return the filetype corresponding to the fio index.
 121     There is as of now no corresponding setftp function because the file
 122     was opened as a specific file type and changing that midway is most
 123     likely an evil hack. */
 124
 125 void gmx_fio_setdebug(t_fileio *fio,gmx_bool bDebug);
 126 /* Set the debug mode */
 127
 128 gmx_bool gmx_fio_getdebug(t_fileio *fio);
 129 /* Return  whether debug mode is on in fio  */
 130
 131 gmx_bool gmx_fio_getread(t_fileio *fio);
 132 /* Return  whether read mode is on in fio  */
 133
 134
 135 void gmx_fio_checktype(t_fileio *fio);
 136 /* Check whether the fio is of a sane type */
 137
 138 /***************************************************
 139  * FILE Operations
 140  ***************************************************/
 141
 142 void gmx_fio_rewind(t_fileio *fio);
 143 /* Rewind the tpa file in fio */
 144
 145 int gmx_fio_flush(t_fileio *fio);
 146 /* Flush the fio, returns 0 on success */
 147
 148 int gmx_fio_fsync(t_fileio *fio);
 149 /* fsync the fio, returns 0 on success.
 150    NOTE: don't use fsync function unless you're absolutely sure you need it
 151    because it deliberately interferes with the OS's caching mechanisms and
 152    can cause dramatically slowed down IO performance. Some OSes (Linux,
 153    for example), may implement fsync as a full sync() point. */
 154
 155 gmx_off_t gmx_fio_ftell(t_fileio *fio);
 156 /* Return file position if possible */
 157
 158 int gmx_fio_seek(t_fileio *fio,gmx_off_t fpos);
 159 /* Set file position if possible, quit otherwise */
 160
 161 FILE *gmx_fio_getfp(t_fileio *fio);
 162 /* Return the file pointer itself */
 163
 164 XDR *gmx_fio_getxdr(t_fileio *fio);
 165 /* Return the file pointer itself */
 166
 167
 168
 169
 170
 171 /* Element with information about position in a currently open file.
 172  * gmx_off_t should be defined by autoconf if your system does not have it.
 173  * If you do not have it on some other platform you do not have largefile
 174  * support at all, and you can define it to int (or better, find out how to
 175  * enable large files).  */
 176 typedef struct
 177 {
 178         char      filename[STRLEN];
 179         gmx_off_t offset;
 180         unsigned char chksum[16];
 181         int       chksum_size;
 182 }
 183 gmx_file_position_t;
 184
 185
 186 int gmx_fio_check_file_position(t_fileio *fio);
 187 /* Check if the file position is out of the range of off_t.
 188  * The result is stored along with the other file data of fio.
 189  */
 190
 191 int gmx_fio_get_output_file_positions(gmx_file_position_t ** outputfiles,
 192                                       int *nfiles );
 193 /* Return the name and file pointer positions for all currently open
 194  * output files. This is used for saving in the checkpoint files, so we
 195  * can truncate output files upon restart-with-appending.
 196  *
 197  * For the first argument you should use a pointer, which will be set to
 198  * point to a list of open files.
 199  */
 200
 201 t_fileio *gmx_fio_all_output_fsync(void);
 202 /* fsync all open output files. This is used for checkpointing, where
 203    we need to ensure that all output is actually written out to
 204    disk.
 205    This is most important in the case of some networked file systems,
 206    where data is not synced with the file server until close() or
 207    fsync(), so data could remain in cache for days.
 208    Note the caveats reported with gmx_fio_fsync().
 209
 210     returns: NULL if no error occurred, or a pointer to the first file that
 211              failed if an error occurred
 212 */
 213
 214
 215 int gmx_fio_get_file_md5(t_fileio *fio, gmx_off_t offset,
 216                          unsigned char digest[]);
 217
 218
 219 int xtc_seek_frame(t_fileio *fio, int frame, int natoms);
 220
 221 int xtc_seek_time(t_fileio *fio, real time, int natoms);
 222
 223
 224 /* Add this to the comment string for debugging */
 225 void gmx_fio_set_comment(t_fileio *fio, const char *comment);
 226
 227 /* Remove previously set comment */
 228 void gmx_fio_unset_comment(t_fileio *fio);
 229
 230
 231
 232
 233 /********************************************************
 234  * Read and write
 235  ********************************************************/
 236
 237
 238 /* basic reading & writing */
 239 gmx_bool gmx_fio_reade_real(t_fileio *fio, real *item,
 240                         const char *desc, const char *srcfile, int line);
 241 gmx_bool gmx_fio_reade_float(t_fileio *fio, float *item,
 242                           const char *desc, const char *srcfile, int line);
 243 gmx_bool gmx_fio_reade_double(t_fileio *fio, double *item,
 244                           const char *desc, const char *srcfile, int line);
 245 gmx_bool gmx_fio_reade_int(t_fileio *fio, int *item,
 246                        const char *desc, const char *srcfile, int line);
 247 gmx_bool gmx_fio_reade_gmx_large_int(t_fileio *fio, gmx_large_int_t *item,
 248                                  const char *desc, const char *srcfile, int line);
 249 gmx_bool gmx_fio_reade_uchar(t_fileio *fio, unsigned char *item,
 250                          const char *desc, const char *srcfile, int line);
 251 gmx_bool gmx_fio_reade_ushort(t_fileio *fio, unsigned short *item,
 252                          const char *desc, const char *srcfile, int line);
 253 gmx_bool gmx_fio_reade_rvec(t_fileio *fio, rvec *item,
 254                         const char *desc, const char *srcfile, int line);
 255 gmx_bool gmx_fio_reade_ivec(t_fileio *fio, ivec *item,
 256                         const char *desc, const char *srcfile, int line);
 257 gmx_bool gmx_fio_reade_string(t_fileio *fio, char *item,
 258                           const char *desc, const char *srcfile, int line);
 259
 260 gmx_bool gmx_fio_writee_real(t_fileio *fio, real item,
 261                          const char *desc, const char *srcfile, int line);
 262 gmx_bool gmx_fio_writee_float(t_fileio *fio, float item,
 263                            const char *desc, const char *srcfile, int line);
 264 gmx_bool gmx_fio_writee_double(t_fileio *fio, double item,
 265                            const char *desc, const char *srcfile, int line);
 266 gmx_bool gmx_fio_writee_int(t_fileio *fio, int item,
 267                         const char *desc, const char *srcfile, int line);
 268 gmx_bool gmx_fio_writee_gmx_large_int(t_fileio *fio, gmx_large_int_t item,
 269                                   const char *desc, const char *srcfile, int line);
 270 gmx_bool gmx_fio_writee_uchar(t_fileio *fio, unsigned char item,
 271                           const char *desc, const char *srcfile, int line);
 272 gmx_bool gmx_fio_writee_ushort(t_fileio *fio, unsigned short item,
 273                           const char *desc, const char *srcfile, int line);
 274 gmx_bool gmx_fio_writee_rvec(t_fileio *fio, rvec *item,
 275                          const char *desc, const char *srcfile, int line);
 276 gmx_bool gmx_fio_writee_ivec(t_fileio *fio, ivec *item,
 277                          const char *desc, const char *srcfile, int line);
 278 gmx_bool gmx_fio_writee_string(t_fileio *fio, const char *item,
 279                            const char *desc, const char *srcfile, int line);
 280
 281 /* reading or writing, depending on the file's opening mode string */
 282 gmx_bool gmx_fio_doe_real(t_fileio *fio, real *item,
 283                       const char *desc, const char *srcfile, int line);
 284 gmx_bool gmx_fio_doe_float(t_fileio *fio, float *item,
 285                        const char *desc, const char *srcfile, int line);
 286 gmx_bool gmx_fio_doe_double(t_fileio *fio, double *item,
 287                         const char *desc, const char *srcfile, int line);
 288 gmx_bool gmx_fio_doe_gmx_bool(t_fileio *fio, gmx_bool *item,
 289                      const char *desc, const char *srcfile, int line);
 290 gmx_bool gmx_fio_doe_int(t_fileio *fio, int *item,
 291                      const char *desc, const char *srcfile, int line);
 292 gmx_bool gmx_fio_doe_gmx_large_int(t_fileio *fio, gmx_large_int_t *item,
 293                                const char *desc, const char *srcfile, int line);
 294 gmx_bool gmx_fio_doe_uchar(t_fileio *fio, unsigned char *item,
 295                        const char *desc, const char *srcfile, int line);
 296 gmx_bool gmx_fio_doe_ushort(t_fileio *fio, unsigned short *item,
 297                        const char *desc, const char *srcfile, int line);
 298 gmx_bool gmx_fio_doe_rvec(t_fileio *fio, rvec *item,
 299                       const char *desc, const char *srcfile, int line);
 300 gmx_bool gmx_fio_doe_ivec(t_fileio *fio, ivec *item,
 301                       const char *desc, const char *srcfile, int line);
 302 gmx_bool gmx_fio_doe_string(t_fileio *fio, char *item,
 303                         const char *desc, const char *srcfile, int line);
 304
 305
 306
 307
 308 /* array reading & writing */
 309 gmx_bool gmx_fio_nreade_real(t_fileio *fio, real *item, int n,
 310                          const char *desc, const char *srcfile, int line);
 311 gmx_bool gmx_fio_nreade_float(t_fileio *fio, float *item, int n,
 312                           const char *desc, const char *srcfile, int line);
 313 gmx_bool gmx_fio_nreade_double(t_fileio *fio, double *item, int n,
 314                            const char *desc, const char *srcfile, int line);
 315 gmx_bool gmx_fio_nreade_int(t_fileio *fio, int *item, int n,
 316                         const char *desc, const char *srcfile, int line);
 317 gmx_bool gmx_fio_nreade_gmx_large_int(t_fileio *fio, gmx_large_int_t *item, int n,
 318                                   const char *desc, const char *srcfile,
 319                                   int line);
 320 gmx_bool gmx_fio_nreade_uchar(t_fileio *fio, unsigned char *item, int n,
 321                           const char *desc, const char *srcfile, int line);
 322 gmx_bool gmx_fio_nreade_ushort(t_fileio *fio, unsigned short *item, int n,
 323                           const char *desc, const char *srcfile, int line);
 324 gmx_bool gmx_fio_nreade_rvec(t_fileio *fio, rvec *item, int n,
 325                          const char *desc, const char *srcfile, int line);
 326 gmx_bool gmx_fio_nreade_ivec(t_fileio *fio, ivec *item, int n,
 327                          const char *desc, const char *srcfile, int line);
 328 gmx_bool gmx_fio_nreade_string(t_fileio *fio, char *item[], int n,
 329                            const char *desc, const char *srcfile, int line);
 330
 331 gmx_bool gmx_fio_nwritee_real(t_fileio *fio, const real *item, int n,
 332                           const char *desc, const char *srcfile, int line);
 333 gmx_bool gmx_fio_nwritee_float(t_fileio *fio, const float *item, int n,
 334                            const char *desc, const char *srcfile, int line);
 335 gmx_bool gmx_fio_nwritee_double(t_fileio *fio, const double *item, int n,
 336                             const char *desc, const char *srcfile, int line);
 337 gmx_bool gmx_fio_nwritee_int(t_fileio *fio, const int *item, int n,
 338                          const char *desc, const char *srcfile, int line);
 339 gmx_bool gmx_fio_nwritee_gmx_large_int(t_fileio *fio,
 340                                    const gmx_large_int_t *item, int n,
 341                                    const char *desc, const char *srcfile,
 342                                    int line);
 343 gmx_bool gmx_fio_nwritee_uchar(t_fileio *fio, const unsigned char *item, int n,
 344                            const char *desc, const char *srcfile, int line);
 345 gmx_bool gmx_fio_nwritee_ushort(t_fileio *fio, const unsigned short *item, int n,
 346                            const char *desc, const char *srcfile, int line);
 347 gmx_bool gmx_fio_nwritee_rvec(t_fileio *fio, const rvec *item, int n,
 348                           const char *desc, const char *srcfile, int line);
 349 gmx_bool gmx_fio_nwritee_ivec(t_fileio *fio, const ivec *item, int n,
 350                           const char *desc, const char *srcfile, int line);
 351 gmx_bool gmx_fio_nwritee_string(t_fileio *fio, const char *item[], int n,
 352                             const char *desc, const char *srcfile, int line);
 353
 354 gmx_bool gmx_fio_ndoe_real(t_fileio *fio, real *item, int n,
 355                        const char *desc, const char *srcfile, int line);
 356 gmx_bool gmx_fio_ndoe_float(t_fileio *fio, float *item, int n,
 357                          const char *desc, const char *srcfile, int line);
 358 gmx_bool gmx_fio_ndoe_double(t_fileio *fio, double *item, int n,
 359                          const char *desc, const char *srcfile, int line);
 360 gmx_bool gmx_fio_ndoe_gmx_bool(t_fileio *fio, gmx_bool *item, int n,
 361                       const char *desc, const char *srcfile, int line);
 362 gmx_bool gmx_fio_ndoe_int(t_fileio *fio, int *item, int n,
 363                       const char *desc, const char *srcfile, int line);
 364 gmx_bool gmx_fio_ndoe_gmx_large_int(t_fileio *fio, gmx_large_int_t *item, int n,
 365                                 const char *desc, const char *srcfile,
 366                                 int line);
 367 gmx_bool gmx_fio_ndoe_uchar(t_fileio *fio, unsigned char *item, int n,
 368                         const char *desc, const char *srcfile, int line);
 369 gmx_bool gmx_fio_ndoe_ushort(t_fileio *fio, unsigned short *item, int n,
 370                         const char *desc, const char *srcfile, int line);
 371 gmx_bool gmx_fio_ndoe_rvec(t_fileio *fio, rvec *item, int n,
 372                        const char *desc, const char *srcfile, int line);
 373 gmx_bool gmx_fio_ndoe_ivec(t_fileio *fio, ivec *item, int n,
 374                        const char *desc, const char *srcfile, int line);
 375 gmx_bool gmx_fio_ndoe_string(t_fileio *fio, char *item[], int n,
 376                          const char *desc, const char *srcfile, int line);
 377
 378
 379
 380 /* convenience macros */
 381 #define gmx_fio_read_real(fio, item)           gmx_fio_reade_real(fio, &item, (#item), __FILE__, __LINE__)
 382 #define gmx_fio_read_float(fio, item)          gmx_fio_reade_float(fio, &item, (#item), __FILE__, __LINE__)
 383 #define gmx_fio_read_double(fio, item)         gmx_fio_reade_double(fio, &item, (#item), __FILE__, __LINE__)
 384 #define gmx_fio_read_int(fio, item)            gmx_fio_reade_int(fio, &item, (#item), __FILE__, __LINE__)
 385 #define gmx_fio_read_gmx_large_int(fio, item)  gmx_fio_reade_gmx_large_int(fio, &item, (#item), __FILE__, __LINE__)
 386 #define gmx_fio_read_uchar(fio, item)          gmx_fio_reade_uchar(fio, &item, (#item), __FILE__, __LINE__)
 387 #define gmx_fio_read_ushort(fio, item)         gmx_fio_reade_ushort(fio, &item, (#item), __FILE__, __LINE__)
 388 #define gmx_fio_read_rvec(fio, item)           gmx_fio_reade_rvec(fio, item, (#item), __FILE__, __LINE__)
 389 #define gmx_fio_read_ivec(fio, item)           gmx_fio_reade_ivec(fio, item, (#item), __FILE__, __LINE__)
 390 #define gmx_fio_read_string(fio, item)         gmx_fio_reade_string(fio, item, (#item), __FILE__, __LINE__)
 391
 392 #define gmx_fio_write_real(fio, item)           gmx_fio_writee_real(fio, item, (#item), __FILE__, __LINE__)
 393 #define gmx_fio_write_float(fio, item)          gmx_fio_writee_float(fio, item, (#item), __FILE__, __LINE__)
 394 #define gmx_fio_write_double(fio, item)         gmx_fio_writee_double(fio, item, (#item), __FILE__, __LINE__)
 395 #define gmx_fio_write_int(fio, item)            gmx_fio_writee_int(fio, item, (#item), __FILE__, __LINE__)
 396 #define gmx_fio_write_gmx_large_int(fio, item)  gmx_fio_writee_gmx_large_int(fio, item, (#item), __FILE__, __LINE__)
 397 #define gmx_fio_write_uchar(fio, item)          gmx_fio_writee_uchar(fio, item, (#item), __FILE__, __LINE__)
 398 #define gmx_fio_write_ushort(fio, item)         gmx_fio_writee_ushort(fio, item, (#item), __FILE__, __LINE__)
 399 #define gmx_fio_write_rvec(fio, item)           gmx_fio_writee_rvec(fio, item, (#item), __FILE__, __LINE__)
 400 #define gmx_fio_write_ivec(fio, item)           gmx_fio_writee_ivec(fio, item, (#item), __FILE__, __LINE__)
 401 #define gmx_fio_write_string(fio, item)         gmx_fio_writee_string(fio, item, (#item), __FILE__, __LINE__)
 402
 403 #define gmx_fio_do_real(fio, item)              gmx_fio_doe_real(fio, &item, (#item), __FILE__, __LINE__)
 404 #define gmx_fio_do_float(fio, item)             gmx_fio_doe_float(fio, &item, (#item), __FILE__, __LINE__)
 405 #define gmx_fio_do_double(fio, item)            gmx_fio_doe_double(fio, &item, (#item), __FILE__, __LINE__)
 406 #define gmx_fio_do_gmx_bool(fio, item)              gmx_fio_doe_gmx_bool(fio, &item, (#item), __FILE__, __LINE__)
 407 #define gmx_fio_do_int(fio, item)               gmx_fio_doe_int(fio, &item, (#item), __FILE__, __LINE__)
 408 #define gmx_fio_do_gmx_large_int(fio, item)     gmx_fio_doe_gmx_large_int(fio, &item, (#item), __FILE__, __LINE__)
 409 #define gmx_fio_do_uchar(fio, item)             gmx_fio_doe_uchar(fio, &item, (#item), __FILE__, __LINE__)
 410 #define gmx_fio_do_ushort(fio, item)            gmx_fio_doe_ushort(fio, &item, (#item), __FILE__, __LINE__)
 411 #define gmx_fio_do_rvec(fio, item)              gmx_fio_doe_rvec(fio, &item, (#item), __FILE__, __LINE__)
 412 #define gmx_fio_do_ivec(fio, item)              gmx_fio_doe_ivec(fio, &item, (#item), __FILE__, __LINE__)
 413 #define gmx_fio_do_string(fio, item)            gmx_fio_doe_string(fio, item, (#item), __FILE__, __LINE__)
 414
 415
 416
 417
 418 #define gmx_fio_nread_real(fio, item, n)            gmx_fio_nreade_real(fio, item, n, (#item), __FILE__, __LINE__)
 419 #define gmx_fio_nread_float(fio, item, n)           gmx_fio_nreade_float(fio, item, n, (#item), __FILE__, __LINE__)
 420 #define gmx_fio_nread_double(fio, item, n)          gmx_fio_nreade_double(fio, item, n, (#item), __FILE__, __LINE__)
 421 #define gmx_fio_nread_int(fio, item, n)             gmx_fio_nreade_int(fio, item, n, (#item), __FILE__, __LINE__)
 422 #define gmx_fio_nread_gmx_large_int(fio, item, n)   gmx_fio_nreade_gmx_large_int(fio, item, n, (#item), __FILE__, __LINE__)
 423 #define gmx_fio_nread_uchar(fio, item, n)           gmx_fio_nreade_uchar(fio, item, n, (#item), __FILE__, __LINE__)
 424 #define gmx_fio_nread_ushort(fio, item, n)          gmx_fio_nreade_ushort(fio, item, n, (#item), __FILE__, __LINE__)
 425 #define gmx_fio_nread_rvec(fio, item, n)            gmx_fio_nreade_rvec(fio, item, n, (#item), __FILE__, __LINE__)
 426 #define gmx_fio_nread_ivec(fio, item, n)            gmx_fio_nreade_ivec(fio, item, n, (#item), __FILE__, __LINE__)
 427 #define gmx_fio_nread_string(fio, item, n)          gmx_fio_nreade_string(fio, item, n, (#item), __FILE__, __LINE__)
 428
 429 #define gmx_fio_nwrite_real(fio, item, n)           gmx_fio_nwritee_real(fio, item, n, (#item), __FILE__, __LINE__)
 430 #define gmx_fio_nwrite_float(fio, item, n)          gmx_fio_nwritee_float(fio, item, n, (#item), __FILE__, __LINE__)
 431 #define gmx_fio_nwrite_double(fio, item, n)         gmx_fio_nwritee_double(fio, item, n, (#item), __FILE__, __LINE__)
 432 #define gmx_fio_nwrite_int(fio, item, n)            gmx_fio_nwritee_int(fio, item, n, (#item), __FILE__, __LINE__)
 433 #define gmx_fio_nwrite_gmx_large_int(fio, item, n)  gmx_fio_nwritee_gmx_large_int(fio, item, n, (#item), __FILE__, __LINE__)
 434 #define gmx_fio_nwrite_uchar(fio, item, n)          gmx_fio_nwritee_uchar(fio, item, n, (#item), __FILE__, __LINE__)
 435 #define gmx_fio_nwrite_ushort(fio, item, n)         gmx_fio_nwritee_ushort(fio, item, n, (#item), __FILE__, __LINE__)
 436 #define gmx_fio_nwrite_rvec(fio, item, n)           gmx_fio_nwritee_rvec(fio, item, n, (#item), __FILE__, __LINE__)
 437 #define gmx_fio_nwrite_ivec(fio, item, n)           gmx_fio_nwritee_ivec(fio, item, n, (#item), __FILE__, __LINE__)
 438 #define gmx_fio_nwrite_string(fio, item, n)         gmx_fio_nwritee_string(fio, item, n, (#item), __FILE__, __LINE__)
 439
 440 #define gmx_fio_ndo_real(fio, item, n)              gmx_fio_ndoe_real(fio, item, n, (#item), __FILE__, __LINE__)
 441 #define gmx_fio_ndo_float(fio, item, n)             gmx_fio_ndoe_float(fio, item, n, (#item), __FILE__, __LINE__)
 442 #define gmx_fio_ndo_double(fio, item, n)            gmx_fio_ndoe_double(fio, item, n, (#item), __FILE__, __LINE__)
 443 #define gmx_fio_ndo_gmx_bool(fio, item, n)              gmx_fio_ndoe_gmx_bool(fio, item, n, (#item), __FILE__, __LINE__)
 444 #define gmx_fio_ndo_int(fio, item, n)               gmx_fio_ndoe_int(fio, item, n, (#item), __FILE__, __LINE__)
 445 #define gmx_fio_ndo_gmx_large_int(fio, item, n)     gmx_fio_ndoe_gmx_large_int(fio, item, n, (#item), __FILE__, __LINE__)
 446 #define gmx_fio_ndo_uchar(fio, item, n)             gmx_fio_ndoe_uchar(fio, item, n, (#item), __FILE__, __LINE__)
 447 #define gmx_fio_ndo_ushort(fio, item, n)            gmx_fio_ndoe_ushort(fio, item, n, (#item), __FILE__, __LINE__)
 448 #define gmx_fio_ndo_rvec(fio, item, n)              gmx_fio_ndoe_rvec(fio, item, n, (#item), __FILE__, __LINE__)
 449 #define gmx_fio_ndo_ivec(fio, item, n)              gmx_fio_ndoe_ivec(fio, item, n, (#item), __FILE__, __LINE__)
 450 #define gmx_fio_ndo_string(fio, item, n)            gmx_fio_ndoe_string(fio, item, n, (#item), __FILE__, __LINE__)
 451
 452
 453
 454 #endif