Public Git Hosting - gromacs/adressmacs.git/commit

commit	1c10c0da3abef4d51f8f0c2e2ee4960960d38f87
author	Christoph Junghans <junghans@mpip-mainz.mpg.de>
	Thu, 26 Aug 2010 08:08:45 +0000 (26 10:08 +0200)
committer	Christoph Junghans <junghans@mpip-mainz.mpg.de>
	Thu, 26 Aug 2010 08:08:45 +0000 (26 10:08 +0200)
tree	753f0696ac7e974412afff1797e2e87cb3fac35b	tree \| snapshot (tar.gz zip)
parent	5e3473a12e722b233f30e469f6747f2eee73429a	commit \| diff

Revertiing my fake merge to make history consistent

Revert "Merge branch 'release-4-5-patches'"

This reverts commit 5e3473a12e722b233f30e469f6747f2eee73429a.

399 files changed:

configure.ac		diff \| blob \| blame \| history
include/3dview.h		diff \| blob \| blame \| history
include/assert.h		diff \| blob \| blame \| history
include/atomprop.h		diff \| blob \| blame \| history
include/bondf.h		diff \| blob \| blame \| history
include/calcgrid.h		diff \| blob \| blame \| history
include/calch.h		diff \| blob \| blame \| history
include/calcmu.h		diff \| blob \| blame \| history
include/centerofmass.h		diff \| blob \| blame \| history
include/chargegroup.h		diff \| blob \| blame \| history
include/checkpoint.h		diff \| blob \| blame \| history
include/confio.h		diff \| blob \| blame \| history
include/constr.h		diff \| blob \| blame \| history
include/copyrite.h		diff \| blob \| blame \| history
include/coulomb.h		diff \| blob \| blame \| history
include/dihre.h		diff \| blob \| blame \| history
include/displacement.h		diff \| blob \| blame \| history
include/disre.h		diff \| blob \| blame \| history
include/do_fit.h		diff \| blob \| blame \| history
include/domdec.h		diff \| blob \| blame \| history
include/domdec_network.h		diff \| blob \| blame \| history
include/ebin.h		diff \| blob \| blame \| history
include/edsam.h		diff \| blob \| blame \| history
include/enxio.h		diff \| blob \| blame \| history
include/ffscanf.h		diff \| blob \| blame \| history
include/filenm.h		diff \| blob \| blame \| history
include/force.h		diff \| blob \| blame \| history
include/futil.h		diff \| blob \| blame \| history
include/gbutil.h		diff \| blob \| blame \| history
include/gen_ad.h		diff \| blob \| blame \| history
include/genborn.h		diff \| blob \| blame \| history
include/gmx_arpack.h		diff \| blob \| blame \| history
include/gmx_blas.h		diff \| blob \| blame \| history
include/gmx_fatal.h		diff \| blob \| blame \| history
include/gmx_ga2la.h		diff \| blob \| blame \| history
include/gmx_lapack.h		diff \| blob \| blame \| history
include/gmx_matrix.h		diff \| blob \| blame \| history
include/gmx_parallel_3dfft.h		diff \| blob \| blame \| history
include/gmx_random.h		diff \| blob \| blame \| history
include/gmx_sse2_double.h		diff \| blob \| blame \| history
include/gmx_sse2_single.h		diff \| blob \| blame \| history
include/gmx_statistics.h		diff \| blob \| blame \| history
include/gmx_system_xdr.h		diff \| blob \| blame \| history
include/gmx_wallcycle.h		diff \| blob \| blame \| history
include/gmxcomplex.h		diff \| blob \| blame \| history
include/gmxcpp.h		diff \| blob \| blame \| history
include/gmxfio.h		diff \| blob \| blame \| history
include/gpp_atomtype.h		diff \| blob \| blame \| history
include/gpp_nextnb.h		diff \| blob \| blame \| history
include/grompp.h		diff \| blob \| blame \| history
include/gstat.h		diff \| blob \| blame \| history
include/hackblock.h		diff \| blob \| blame \| history
include/histogram.h		diff \| blob \| blame \| history
include/index.h		diff \| blob \| blame \| history
include/indexutil.h		diff \| blob \| blame \| history
include/invblock.h		diff \| blob \| blame \| history
include/macros.h		diff \| blob \| blame \| history
include/magic.h		diff \| blob \| blame \| history
include/main.h		diff \| blob \| blame \| history
include/maths.h		diff \| blob \| blame \| history
include/matio.h		diff \| blob \| blame \| history
include/mdatoms.h		diff \| blob \| blame \| history
include/mdebin.h		diff \| blob \| blame \| history
include/mdrun.h		diff \| blob \| blame \| history
include/mshift.h		diff \| blob \| blame \| history
include/mtop_util.h		diff \| blob \| blame \| history
include/mtxio.h		diff \| blob \| blame \| history
include/mvdata.h		diff \| blob \| blame \| history
include/names.h		diff \| blob \| blame \| history
include/nbsearch.h		diff \| blob \| blame \| history
include/network.h		diff \| blob \| blame \| history
include/nrama.h		diff \| blob \| blame \| history
include/nrjac.h		diff \| blob \| blame \| history
include/nrnb.h		diff \| blob \| blame \| history
include/ns.h		diff \| blob \| blame \| history
include/nsgrid.h		diff \| blob \| blame \| history
include/oenv.h		diff \| blob \| blame \| history
include/orires.h		diff \| blob \| blame \| history
include/partdec.h		diff \| blob \| blame \| history
include/pbc.h		diff \| blob \| blame \| history
include/pdb2top.h		diff \| blob \| blame \| history
include/pdbio.h		diff \| blob \| blame \| history
include/perf_est.h		diff \| blob \| blame \| history
include/physics.h		diff \| blob \| blame \| history
include/pme.h		diff \| blob \| blame \| history
include/poscalc.h		diff \| blob \| blame \| history
include/position.h		diff \| blob \| blame \| history
include/pppm.h		diff \| blob \| blame \| history
include/princ.h		diff \| blob \| blame \| history
include/pull.h		diff \| blob \| blame \| history
include/qmmm.h		diff \| blob \| blame \| history
include/random.h		diff \| blob \| blame \| history
include/rbin.h		diff \| blob \| blame \| history
include/rdgroup.h		diff \| blob \| blame \| history
include/readinp.h		diff \| blob \| blame \| history
include/resall.h		diff \| blob \| blame \| history
include/rmpbc.h		diff \| blob \| blame \| history
include/selection.h		diff \| blob \| blame \| history
include/selmethod.h		diff \| blob \| blame \| history
include/selparam.h		diff \| blob \| blame \| history
include/selvalue.h		diff \| blob \| blame \| history
include/sfactor.h		diff \| blob \| blame \| history
include/shellfc.h		diff \| blob \| blame \| history
include/shift.h		diff \| blob \| blame \| history
include/sighandler.h		diff \| blob \| blame \| history
include/smalloc.h		diff \| blob \| blame \| history
include/sortwater.h		diff \| blob \| blame \| history
include/sparsematrix.h		diff \| blob \| blame \| history
include/split.h		diff \| blob \| blame \| history
include/splitter.h		diff \| blob \| blame \| history
include/statutil.h		diff \| blob \| blame \| history
include/strdb.h		diff \| blob \| blame \| history
include/string2.h		diff \| blob \| blame \| history
include/symtab.h		diff \| blob \| blame \| history
include/sysstuff.h		diff \| blob \| blame \| history
include/tgroup.h		diff \| blob \| blame \| history
include/thread_mpi/atomic.h		diff \| blob \| blame \| history
include/thread_mpi/atomic/xlc_ppc.h		diff \| blob \| blame \| history
include/topsort.h		diff \| blob \| blame \| history
include/toputil.h		diff \| blob \| blame \| history
include/tpxio.h		diff \| blob \| blame \| history
include/trajana.h		diff \| blob \| blame \| history
include/trnio.h		diff \| blob \| blame \| history
include/txtdump.h		diff \| blob \| blame \| history
include/typedefs.h		diff \| blob \| blame \| history
include/types/atoms.h		diff \| blob \| blame \| history
include/types/block.h		diff \| blob \| blame \| history
include/types/commrec.h		diff \| blob \| blame \| history
include/types/constr.h		diff \| blob \| blame \| history
include/types/energy.h		diff \| blob \| blame \| history
include/types/enums.h		diff \| blob \| blame \| history
include/types/fcdata.h		diff \| blob \| blame \| history
include/types/filenm.h		diff \| blob \| blame \| history
include/types/forcerec.h		diff \| blob \| blame \| history
include/types/genborn.h		diff \| blob \| blame \| history
include/types/graph.h		diff \| blob \| blame \| history
include/types/group.h		diff \| blob \| blame \| history
include/types/idef.h		diff \| blob \| blame \| history
include/types/ifunc.h		diff \| blob \| blame \| history
include/types/inputrec.h		diff \| blob \| blame \| history
include/types/ishift.h		diff \| blob \| blame \| history
include/types/matrix.h		diff \| blob \| blame \| history
include/types/mdatom.h		diff \| blob \| blame \| history
include/types/nblist.h		diff \| blob \| blame \| history
include/types/nrnb.h		diff \| blob \| blame \| history
include/types/ns.h		diff \| blob \| blame \| history
include/types/nsgrid.h		diff \| blob \| blame \| history
include/types/oenv.h		diff \| blob \| blame \| history
include/types/pbc.h		diff \| blob \| blame \| history
include/types/qmmmrec.h		diff \| blob \| blame \| history
include/types/shellfc.h		diff \| blob \| blame \| history
include/types/simple.h		diff \| blob \| blame \| history
include/types/state.h		diff \| blob \| blame \| history
include/types/symtab.h		diff \| blob \| blame \| history
include/types/topology.h		diff \| blob \| blame \| history
include/types/trx.h		diff \| blob \| blame \| history
include/update.h		diff \| blob \| blame \| history
include/vcm.h		diff \| blob \| blame \| history
include/vec.h		diff \| blob \| blame \| history
include/viewit.h		diff \| blob \| blame \| history
include/vsite.h		diff \| blob \| blame \| history
include/warninp.h		diff \| blob \| blame \| history
include/wgms.h		diff \| blob \| blame \| history
include/wman.h		diff \| blob \| blame \| history
include/writeps.h		diff \| blob \| blame \| history
include/xdrf.h		diff \| blob \| blame \| history
include/xtcio.h		diff \| blob \| blame \| history
include/xvgr.h		diff \| blob \| blame \| history
share/top/charmm27.ff/aminoacids.arn		diff \| blob \| blame \| history
share/top/charmm27.ff/aminoacids.c.tdb		diff \| blob \| blame \| history
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share/top/charmm27.ff/aminoacids.rtp		diff \| blob \| blame \| history
share/top/charmm27.ff/ffnonbonded.itp		diff \| blob \| blame \| history
share/top/charmm27.ff/forcefield.doc		diff \| blob \| blame \| history
share/top/charmm27.ff/forcefield.itp		diff \| blob \| blame \| history
share/top/charmm27.ff/watermodels.dat		diff \| blob \| blame \| history
src/gmxlib/atomprop.c		diff \| blob \| blame \| history
src/gmxlib/checkpoint.c		diff \| blob \| blame \| history
src/gmxlib/filenm.c		diff \| blob \| blame \| history
src/gmxlib/futil.c		diff \| blob \| blame \| history
src/gmxlib/genversion.sh		diff \| blob \| blame \| history
src/gmxlib/gmxcpp.c		diff \| blob \| blame \| history
src/gmxlib/index.c		diff \| blob \| blame \| history
src/gmxlib/libgmx.pc.in		diff \| blob \| blame \| history
src/gmxlib/libxdrf.c		diff \| blob \| blame \| history
src/gmxlib/main.c		diff \| blob \| blame \| history
src/gmxlib/matio.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/Makefile.am		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel010_f77_double.c		diff \| blob \| blame \| history
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src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel314_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel320_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel320_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel321_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel321_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel322_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel322_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel323_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel323_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel324_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel324_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel330_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel330_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel331_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel331_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel332_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel332_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel333_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel333_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel334_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel334_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel400_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel400_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel410_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel410_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel420_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel420_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel430_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel430_f77_double.h		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel_f77_double.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_f77_double/nb_kernel_f77sync.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_ia32_sse/nb_kernel400_ia32_sse.c	[copied from src/gmxlib/nonbonded/nb_kernel_ia32_sse2/nb_kernel400_ia32_sse2.c with 100% similarity]	blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_ia32_sse/nb_kernel410_ia32_sse.c	[copied from src/gmxlib/nonbonded/nb_kernel_ia32_sse2/nb_kernel410_ia32_sse2.c with 100% similarity]	blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_ia32_sse/nb_kernel430_ia32_sse.c	[copied from src/gmxlib/nonbonded/nb_kernel_ia32_sse2/nb_kernel430_ia32_sse2.c with 99% similarity]	diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_ia32_sse2/nb_kernel400_ia32_sse2.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_ia32_sse2/nb_kernel410_ia32_sse2.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_ia32_sse2/nb_kernel430_ia32_sse2.c		diff \| blob \| blame \| history
src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel430_x86_64_sse2.c		diff \| blob \| blame \| history
src/gmxlib/nrama.c		diff \| blob \| blame \| history
src/gmxlib/pargs.c		diff \| blob \| blame \| history
src/gmxlib/pdbio.c		diff \| blob \| blame \| history
src/gmxlib/readinp.c		diff \| blob \| blame \| history
src/gmxlib/selection/scanner.c		diff \| blob \| blame \| history
src/gmxlib/selection/scanner.l		diff \| blob \| blame \| history
src/gmxlib/selection/scanner_internal.c		diff \| blob \| blame \| history
src/gmxlib/selection/selmethod.c		diff \| blob \| blame \| history
src/gmxlib/selection/symrec.c		diff \| blob \| blame \| history
src/gmxlib/strdb.c		diff \| blob \| blame \| history
src/gmxlib/string2.c		diff \| blob \| blame \| history
src/gmxlib/tpxio.c		diff \| blob \| blame \| history
src/gmxlib/trajana/trajana.c		diff \| blob \| blame \| history
src/gmxlib/wman.c		diff \| blob \| blame \| history
src/gmxlib/xdrd.c		diff \| blob \| blame \| history
src/gmxlib/xvgr.c		diff \| blob \| blame \| history
src/kernel/add_par.c		diff \| blob \| blame \| history
src/kernel/fflibutil.c		diff \| blob \| blame \| history
src/kernel/fflibutil.h		diff \| blob \| blame \| history
src/kernel/g_x2top.c		diff \| blob \| blame \| history
src/kernel/g_x2top.h		diff \| blob \| blame \| history
src/kernel/gctio.c		diff \| blob \| blame \| history
src/kernel/gen_vsite.c		diff \| blob \| blame \| history
src/kernel/gen_vsite.h		diff \| blob \| blame \| history
src/kernel/genhydro.c		diff \| blob \| blame \| history
src/kernel/gpp_bond_atomtype.c		diff \| blob \| blame \| history
src/kernel/h_db.c		diff \| blob \| blame \| history
src/kernel/h_db.h		diff \| blob \| blame \| history
src/kernel/hizzie.c		diff \| blob \| blame \| history
src/kernel/libgmxpreprocess.pc.in		diff \| blob \| blame \| history
src/kernel/nm2type.c		diff \| blob \| blame \| history
src/kernel/openmm_wrapper.cpp		diff \| blob \| blame \| history
src/kernel/pdb2gmx.c		diff \| blob \| blame \| history
src/kernel/pdb2top.c		diff \| blob \| blame \| history
src/kernel/pgutil.c		diff \| blob \| blame \| history
src/kernel/readir.c		diff \| blob \| blame \| history
src/kernel/readpull.c		diff \| blob \| blame \| history
src/kernel/resall.c		diff \| blob \| blame \| history
src/kernel/specbond.c		diff \| blob \| blame \| history
src/kernel/ter_db.c		diff \| blob \| blame \| history
src/kernel/ter_db.h		diff \| blob \| blame \| history
src/kernel/tomorse.c		diff \| blob \| blame \| history
src/kernel/topdirs.c		diff \| blob \| blame \| history
src/kernel/topio.c		diff \| blob \| blame \| history
src/kernel/toppush.c		diff \| blob \| blame \| history
src/kernel/vsite_parm.c		diff \| blob \| blame \| history
src/kernel/xlate.c		diff \| blob \| blame \| history
src/kernel/xlate.h		diff \| blob \| blame \| history
src/mdlib/gmx_qhop_xml.c		diff \| blob \| blame \| history
src/mdlib/libmd.pc.in		diff \| blob \| blame \| history
src/mdlib/pme_pp.c		diff \| blob \| blame \| history
src/mdlib/sim_util.c		diff \| blob \| blame \| history
src/ngmx/dialogs.c		diff \| blob \| blame \| history
src/ngmx/xdlg.c		diff \| blob \| blame \| history
src/ngmx/xdlghi.c		diff \| blob \| blame \| history
src/ngmx/xstat.c		diff \| blob \| blame \| history
src/tools/dlist.c		diff \| blob \| blame \| history
src/tools/do_dssp.c		diff \| blob \| blame \| history
src/tools/gmx_cluster.c		diff \| blob \| blame \| history
src/tools/gmx_covar.c		diff \| blob \| blame \| history
src/tools/gmx_enemat.c		diff \| blob \| blame \| history
src/tools/gmx_energy.c		diff \| blob \| blame \| history
src/tools/gmx_genbox.c		diff \| blob \| blame \| history
src/tools/gmx_genion.c		diff \| blob \| blame \| history
src/tools/gmx_hbond.c		diff \| blob \| blame \| history
src/tools/gmx_membed.c		diff \| blob \| blame \| history
src/tools/libgmxana.pc.in		diff \| blob \| blame \| history
src/tools/make_ndx.c		diff \| blob \| blame \| history

got merge a long time ago

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