repo.or.cz
/
gromacs.git
/
tree
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
history
|
HEAD
|
snapshot (
tar.gz
zip
)
Change the file structure in constraints tests
[gromacs.git]
/
src
/
gromacs
/
mdlib
/
tree
fb4f3c3e96b09e0c5f0f9dbbc2942b73a49c28b3
drwxr-xr-x
..
-rw-r--r--
2037
CMakeLists.txt
blob
|
blame
|
history
|
raw
-rw-r--r--
5372
boxdeformation.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
3695
boxdeformation.h
blob
|
blame
|
history
|
raw
-rw-r--r--
24135
broadcaststructs.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
4121
broadcaststructs.h
blob
|
blame
|
history
|
raw
-rw-r--r--
54211
calc_verletbuf.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
7897
calc_verletbuf.h
blob
|
blame
|
history
|
raw
-rw-r--r--
3706
calcmu.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2284
calcmu.h
blob
|
blame
|
history
|
raw
-rw-r--r--
7542
calcvir.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2186
calcvir.h
blob
|
blame
|
history
|
raw
-rw-r--r--
4363
checkpointhandler.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
5992
checkpointhandler.h
blob
|
blame
|
history
|
raw
-rw-r--r--
5514
compute_io.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2144
compute_io.h
blob
|
blame
|
history
|
raw
-rw-r--r--
45135
constr.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
12530
constr.h
blob
|
blame
|
history
|
raw
-rw-r--r--
7967
constraintrange.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2080
constraintrange.h
blob
|
blame
|
history
|
raw
-rw-r--r--
57216
coupling.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
25832
dispersioncorrection.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
8252
dispersioncorrection.h
blob
|
blame
|
history
|
raw
-rw-r--r--
10466
ebin.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
7604
ebin.h
blob
|
blame
|
history
|
raw
-rw-r--r--
8429
enerdata_utils.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2525
enerdata_utils.h
blob
|
blame
|
history
|
raw
-rw-r--r--
51021
energyoutput.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
15838
energyoutput.h
blob
|
blame
|
history
|
raw
-rw-r--r--
47409
expanded.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2779
expanded.h
blob
|
blame
|
history
|
raw
-rw-r--r--
16962
force.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
6076
force.h
blob
|
blame
|
history
|
raw
-rw-r--r--
2851
force_flags.h
blob
|
blame
|
history
|
raw
-rw-r--r--
70576
forcerec.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
6431
forcerec.h
blob
|
blame
|
history
|
raw
-rw-r--r--
2058
forcerec_threading.h
blob
|
blame
|
history
|
raw
-rw-r--r--
15850
gmx_omp_nthreads.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
4738
gmx_omp_nthreads.h
blob
|
blame
|
history
|
raw
-rw-r--r--
13894
groupcoord.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
10302
groupcoord.h
blob
|
blame
|
history
|
raw
-rw-r--r--
4086
leapfrog_cuda.h
blob
|
blame
|
history
|
raw
-rw-r--r--
3254
leapfrog_cuda_impl.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
9408
leapfrog_cuda_impl.cu
blob
|
blame
|
history
|
raw
-rw-r--r--
5257
leapfrog_cuda_impl.h
blob
|
blame
|
history
|
raw
-rw-r--r--
82375
lincs.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
3867
lincs.h
blob
|
blame
|
history
|
raw
-rw-r--r--
36366
lincs_cuda.cu
blob
|
blame
|
history
|
raw
-rw-r--r--
8350
lincs_cuda.cuh
blob
|
blame
|
history
|
raw
-rw-r--r--
4976
makeconstraints.h
blob
|
blame
|
history
|
raw
-rw-r--r--
20094
md_support.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
5756
md_support.h
blob
|
blame
|
history
|
raw
-rw-r--r--
18616
mdatoms.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
4394
mdatoms.h
blob
|
blame
|
history
|
raw
-rw-r--r--
24381
mdebin_bar.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
8991
mdebin_bar.h
blob
|
blame
|
history
|
raw
-rw-r--r--
18169
mdoutf.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
6344
mdoutf.h
blob
|
blame
|
history
|
raw
-rw-r--r--
45741
membed.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2341
membed.h
blob
|
blame
|
history
|
raw
-rw-r--r--
27324
nsgrid.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
6175
nsgrid.h
blob
|
blame
|
history
|
raw
-rw-r--r--
16138
perf_est.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2713
perf_est.h
blob
|
blame
|
history
|
raw
-rw-r--r--
3383
ppforceworkload.h
blob
|
blame
|
history
|
raw
-rw-r--r--
10235
qm_gamess.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2317
qm_gamess.h
blob
|
blame
|
history
|
raw
-rw-r--r--
29315
qm_gaussian.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2651
qm_gaussian.h
blob
|
blame
|
history
|
raw
-rw-r--r--
8967
qm_mopac.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2454
qm_mopac.h
blob
|
blame
|
history
|
raw
-rw-r--r--
11436
qm_orca.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
1923
qm_orca.h
blob
|
blame
|
history
|
raw
-rw-r--r--
33130
qmmm.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
7235
qmmm.h
blob
|
blame
|
history
|
raw
-rw-r--r--
4281
rbin.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2768
rbin.h
blob
|
blame
|
history
|
raw
-rw-r--r--
8115
resethandler.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
8321
resethandler.h
blob
|
blame
|
history
|
raw
-rw-r--r--
3053
rf_util.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2071
rf_util.h
blob
|
blame
|
history
|
raw
-rw-r--r--
31916
settle.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
4122
settle.h
blob
|
blame
|
history
|
raw
-rw-r--r--
26071
settle_cuda.cu
blob
|
blame
|
history
|
raw
-rw-r--r--
11344
settle_cuda.cuh
blob
|
blame
|
history
|
raw
-rw-r--r--
29921
shake.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
4932
shake.h
blob
|
blame
|
history
|
raw
-rw-r--r--
5381
sighandler.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
3939
sighandler.h
blob
|
blame
|
history
|
raw
-rw-r--r--
66617
sim_util.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
5120
simulationsignal.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
6718
simulationsignal.h
blob
|
blame
|
history
|
raw
-rw-r--r--
10918
splitter.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2287
splitter.h
blob
|
blame
|
history
|
raw
-rw-r--r--
11809
stat.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
3002
stat.h
blob
|
blame
|
history
|
raw
-rw-r--r--
8244
stophandler.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
13605
stophandler.h
blob
|
blame
|
history
|
raw
drwxr-xr-x
-
tests
tree
|
history
-rw-r--r--
9501
tgroup.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
3089
tgroup.h
blob
|
blame
|
history
|
raw
-rw-r--r--
7839
trajectory_writing.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
3724
trajectory_writing.h
blob
|
blame
|
history
|
raw
-rw-r--r--
72535
update.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
13421
update.h
blob
|
blame
|
history
|
raw
-rw-r--r--
6907
update_constrain_cuda.h
blob
|
blame
|
history
|
raw
-rw-r--r--
4797
update_constrain_cuda_impl.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
8238
update_constrain_cuda_impl.cu
blob
|
blame
|
history
|
raw
-rw-r--r--
7866
update_constrain_cuda_impl.h
blob
|
blame
|
history
|
raw
-rw-r--r--
28912
updategroups.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
3651
updategroups.h
blob
|
blame
|
history
|
raw
-rw-r--r--
5729
updategroupscog.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
7032
updategroupscog.h
blob
|
blame
|
history
|
raw
-rw-r--r--
19237
vcm.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
4630
vcm.h
blob
|
blame
|
history
|
raw
-rw-r--r--
78422
vsite.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
7261
vsite.h
blob
|
blame
|
history
|
raw
-rw-r--r--
11652
wall.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2552
wall.h
blob
|
blame
|
history
|
raw