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drwxr-xr-x		..
-rw-r--r--	2199	CMakeLists.txt	blob \| blame \| history \| raw
-rw-r--r--	5801	calcgrid.cpp	blob \| blame \| history \| raw
-rw-r--r--	2344	calcgrid.h	blob \| blame \| history \| raw
-rw-r--r--	9434	chargegroup.cpp	blob \| blame \| history \| raw
-rw-r--r--	2822	chargegroup.h	blob \| blame \| history \| raw
-rw-r--r--	82938	checkpoint.cpp	blob \| blame \| history \| raw
-rw-r--r--	5653	conformation-utilities.cpp	blob \| blame \| history \| raw
-rw-r--r--	2561	conformation-utilities.h	blob \| blame \| history \| raw
-rw-r--r--	33698	copyrite.cpp	blob \| blame \| history \| raw
drwxr-xr-x	-	cuda_tools	tree \| history
-rw-r--r--	19599	disre.cpp	blob \| blame \| history \| raw
-rw-r--r--	3257	disre.h	blob \| blame \| history \| raw
-rw-r--r--	2812	energyhistory.cpp	blob \| blame \| history \| raw
-rw-r--r--	3482	energyhistory.h	blob \| blame \| history \| raw
-rw-r--r--	45784	gmx_cpuid.c	blob \| blame \| history \| raw
-rw-r--r--	46750	gmx_detect_hardware.cpp	blob \| blame \| history \| raw
-rw-r--r--	19179	gmx_omp_nthreads.cpp	blob \| blame \| history \| raw
-rw-r--r--	17804	gmx_thread_affinity.cpp	blob \| blame \| history \| raw
drwxr-xr-x	-	gpu_utils	tree \| history
-rw-r--r--	11487	ifunc.cpp	blob \| blame \| history \| raw
-rw-r--r--	7962	inputrec.cpp	blob \| blame \| history \| raw
-rw-r--r--	10846	main.cpp	blob \| blame \| history \| raw
-rw-r--r--	3186	main.h	blob \| blame \| history \| raw
-rw-r--r--	2819	md_logging.cpp	blob \| blame \| history \| raw
-rw-r--r--	2580	md_logging.h	blob \| blame \| history \| raw
-rw-r--r--	8440	names.cpp	blob \| blame \| history \| raw
-rw-r--r--	21577	network.cpp	blob \| blame \| history \| raw
drwxr-xr-x	-	nonbonded	tree \| history
-rw-r--r--	21427	nrnb.cpp	blob \| blame \| history \| raw
drwxr-xr-x	-	ocl_tools	tree \| history
-rw-r--r--	20863	orires.cpp	blob \| blame \| history \| raw
-rw-r--r--	3579	orires.h	blob \| blame \| history \| raw
-rw-r--r--	15877	readinp.cpp	blob \| blame \| history \| raw
-rw-r--r--	5119	readinp.h	blob \| blame \| history \| raw
-rw-r--r--	5227	sighandler.cpp	blob \| blame \| history \| raw
-rw-r--r--	3366	sighandler.h	blob \| blame \| history \| raw
-rw-r--r--	11002	splitter.cpp	blob \| blame \| history \| raw
-rw-r--r--	2278	splitter.h	blob \| blame \| history \| raw
-rw-r--r--	64591	txtdump.cpp	blob \| blame \| history \| raw
-rw-r--r--	11537	typedefs.cpp	blob \| blame \| history \| raw
-rw-r--r--	5927	warninp.cpp	blob \| blame \| history \| raw
-rw-r--r--	4769	warninp.h	blob \| blame \| history \| raw