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2020-01-10	Szilárd Páll	Improve mdrun performance user guide	commit \| commitdiff \| tree
2019-12-04	Christian Blau	Remove cutoff-scheme group from default mdout.mdp output	commit \| commitdiff \| tree
2019-10-31	Berk Hess	Update GPU update restrictions	commit \| commitdiff \| tree
2019-10-30	Jonathan Vincent	Update PME CUDA spread/gather	commit \| commitdiff \| tree
2019-10-29	Artem Zhmurov	Switch the GPU buffer ops on when update is on GPU	commit \| commitdiff \| tree
2019-10-28	Artem Zhmurov	Fix missing coordinate D2H copy with GPU update and...	commit \| commitdiff \| tree
2019-10-28	Artem Zhmurov	Add haveCpuLocalForces flag to DomainLifetimeWorkload	commit \| commitdiff \| tree
2019-10-28	Artem Zhmurov	Allow using update flag	commit \| commitdiff \| tree
2019-10-22	Artem Zhmurov	Remove unnecessary CUDA stream synchronization calls	commit \| commitdiff \| tree
2019-10-22	Artem Zhmurov	Rename havePositionRestraints(...) to haveRestraints...	commit \| commitdiff \| tree
2019-10-21	Szilárd Páll	Remove unsupported configs from the gpuupdate matrix	commit \| commitdiff \| tree
2019-10-21	Alan Gray	GPU Coordinate PME/PP Communications	commit \| commitdiff \| tree
2019-10-18	Alan Gray	GPU Receive for PME/PP GPU Force Communications	commit \| commitdiff \| tree
2019-10-18	Paul Bauer	Use clang-tidy-8	commit \| commitdiff \| tree
2019-10-17	Szilárd Páll	Fix clang-tidy warnings in gpuhaloexchange_impl.cuh	commit \| commitdiff \| tree
2019-10-15	Szilárd Páll	Trigger synchronizer when local forces are ready	commit \| commitdiff \| tree
2019-10-15	Artem Zhmurov	Fix the single-GPU update-constraints	commit \| commitdiff \| tree
2019-10-10	Szilárd Páll	Fix conditions for building StatePropagatorDataGpu	commit \| commitdiff \| tree
2019-10-10	Szilárd Páll	Construct a struct with development feature flags	commit \| commitdiff \| tree
2019-10-03	Berk Hess	Fix GPU atom data init timer issue	commit \| commitdiff \| tree
2019-10-02	Artem Zhmurov	Eliminate D2D copy in update constraints	commit \| commitdiff \| tree
2019-09-25	Szilárd Páll	Merge remote-tracking branch 'origin/release-2019'	commit \| commitdiff \| tree
2019-09-18	Szilárd Páll	Set up workload data structures	commit \| commitdiff \| tree
2019-09-18	Paul Bauer	Fix MSVC warning	commit \| commitdiff \| tree
2019-09-17	Paul Bauer	Add deprecation note for 32 bit	commit \| commitdiff \| tree
2019-09-16	Szilárd Páll	Refactor GPU buf ops-related launches in do_force()	commit \| commitdiff \| tree
2019-09-13	Szilárd Páll	Fix GPU X buffer ops with empty domain	commit \| commitdiff \| tree
2019-09-11	Artem Zhmurov	Decouple coordinates buffer management from buffer...	commit \| commitdiff \| tree
2019-09-11	Artem Zhmurov	Reorganize PME code:	commit \| commitdiff \| tree
2019-09-11	Szilárd Páll	Fix gpucomm matrix	commit \| commitdiff \| tree
2019-09-06	Mark Abraham	Clean up commrec uniformly	commit \| commitdiff \| tree
2019-09-04	Berk Hess	Collect settings for DD in DDSettings	commit \| commitdiff \| tree
2019-09-03	Berk Hess	Remove gmx_domdec_t from dd_choose_grid()	commit \| commitdiff \| tree
2019-09-03	Berk Hess	Extact UnitCellInfo from gmx_domdec_t	commit \| commitdiff \| tree
2019-09-02	Mark Abraham	Move initialization of clFFT	commit \| commitdiff \| tree
2019-08-26	Mark Abraham	Converted a CUDA config to use clang host-only compilation	commit \| commitdiff \| tree
2019-08-23	Szilárd Páll	Fix clang tidy warnings in CUDA build	commit \| commitdiff \| tree
2019-08-21	Mark Abraham	Improve organization of LINCS reporting	commit \| commitdiff \| tree
2019-08-15	Alan Gray	PME reduction for CUDA F buffer operations	commit \| commitdiff \| tree
2019-08-12	Szilárd Páll	Fix hwloc find package naming and quietness issues	commit \| commitdiff \| tree
2019-07-26	Berk Hess	Remove sh_invrc6 from interaction_const_t	commit \| commitdiff \| tree
2019-07-19	Alan Gray	F buffer operations in CUDA	commit \| commitdiff \| tree
2019-07-16	Mark Abraham	Add gpubufferops test matrix	commit \| commitdiff \| tree
2019-07-11	Szilárd Páll	Use HostVector for Grid/GridSet data need on-GPU	commit \| commitdiff \| tree
2019-07-04	Szilárd Páll	Bump latest CUDA + gcc in the pre-submit matrix	commit \| commitdiff \| tree
2019-07-04	Szilárd Páll	Fix a -Wformat-truncation warning in tng	commit \| commitdiff \| tree
2019-07-01	Alan Gray	Bug fix and simplification for CUDA X Buffer Ops	commit \| commitdiff \| tree
2019-06-17	Berk Hess	Simplify GPU nbnxm x conversion	commit \| commitdiff \| tree
2019-05-22	Alan Gray	Code quality improvements for CUDA position buffer ops	commit \| commitdiff \| tree
2019-05-20	Szilárd Páll	Improve X buffer ops kernel	commit \| commitdiff \| tree
2019-05-10	Alan Gray	Position buffer ops in CUDA	commit \| commitdiff \| tree
2019-03-27	Berk Hess	Fix nbnxm OpenCL with cluster size 4	commit \| commitdiff \| tree
2019-02-07	Szilárd Páll	Require a 64-bit platform for OpenCL	commit \| commitdiff \| tree
2019-01-18	Mark Abraham	Improve nvcc error reporting	commit \| commitdiff \| tree
2019-01-02	Szilárd Páll	Fix clang 6 warning	commit \| commitdiff \| tree
2018-12-31	Szilárd Páll	Fix release notes typo	commit \| commitdiff \| tree
2018-12-20	Szilárd Páll	Merge "Merge branch release-2018 into release-2019...	commit \| commitdiff \| tree
2018-12-18	Szilárd Páll	Merge release-2019 branch into master	commit \| commitdiff \| tree
2018-12-18	Berk Hess	Use std::vector in LINCS	commit \| commitdiff \| tree
2018-12-17	Szilárd Páll	Fix GMX_BUILD_OWN_FFTW_URL CMake cache entry type	commit \| commitdiff \| tree
2018-12-17	Paul Bauer	Add matrix entry to test external FFTW build	commit \| commitdiff \| tree
2018-12-17	Paul Bauer	Fix FFTW build	commit \| commitdiff \| tree
2018-12-13	Szilárd Páll	Avoid spurious timing in bonded GPU launch subcounter	commit \| commitdiff \| tree
2018-11-26	Mark Abraham	Clean up initial log output	commit \| commitdiff \| tree
2018-11-22	Mark Abraham	Introduce PpForceWorkload	commit \| commitdiff \| tree
2018-11-07	Szilárd Páll	Re-enable the armclang post-submit build	commit \| commitdiff \| tree
2018-11-07	Mark Abraham	Suppress clang warnings about QMMM code	commit \| commitdiff \| tree
2018-11-01	Mark Abraham	Stop using hwloc on old ARM slave	commit \| commitdiff \| tree
2018-10-31	Berk Hess	Pin important buffers in CUDA bondeds	commit \| commitdiff \| tree
2018-10-22	Mark Abraham	Fix clang CUDA warnings	commit \| commitdiff \| tree
2018-10-14	Szilárd Páll	Fix more clang-6 warnings in CUDA code	commit \| commitdiff \| tree
2018-10-08	Roland Schulz	Fix OCL compiler warnings	commit \| commitdiff \| tree
2018-10-08	Roland Schulz	Remove majority of OCL command line constants	commit \| commitdiff \| tree
2018-10-07	Szilárd Páll	Use new GPU slave for AMD OpenCL verify runs	commit \| commitdiff \| tree
2018-10-05	Roland Schulz	Fix multiple bugs detected on Windows	commit \| commitdiff \| tree
2018-10-04	Roland Schulz	Use subgroup for warp_any and CJ4 prefetch	commit \| commitdiff \| tree
2018-10-04	Mark Abraham	Replace CUDA call deprecated in CUDA 10	commit \| commitdiff \| tree
2018-09-27	Roland Schulz	Recognize Intel GPU as compatible	commit \| commitdiff \| tree
2018-09-13	Roland Schulz	Remove sparc64_hpc_ace nonbonded kernels	commit \| commitdiff \| tree
2018-09-07	Mark Abraham	Minor fixes to GPU build system	commit \| commitdiff \| tree
2018-08-27	Aleksei Iupinov	Prepare pme-gpu-types.h for OpenCL	commit \| commitdiff \| tree
2018-08-21	Szilárd Páll	Request flushing denorms to zero in OpenCL	commit \| commitdiff \| tree
2018-06-25	Aleksei Iupinov	Move vectype_ops.clh into gpu_utils	commit \| commitdiff \| tree
2018-06-25	Aleksei Iupinov	Move the PME GPU kernel launch functions into pme-gpu...	commit \| commitdiff \| tree
2018-05-31	Aleksei Iupinov	PME OpenCL 3D FFT transform is implemented, using clFFT	commit \| commitdiff \| tree
2018-05-30	Aleksei Iupinov	Make PME GPU structures use DeviceBuffer	commit \| commitdiff \| tree
2018-05-29	Szilárd Páll	Switch to CUDA 9.2 + gcc 7	commit \| commitdiff \| tree
2018-04-20	Szilárd Páll	Minor fix for pre-submit matrix docs	commit \| commitdiff \| tree
2018-04-19	Szilárd Páll	Move the PME GPU clearing to the end of the step	commit \| commitdiff \| tree
2018-04-18	Mark Abraham	Introduce gmx_used_in_debug	commit \| commitdiff \| tree
2018-04-13	Szilárd Páll	Use trivalue option for GMX_HWLOC	commit \| commitdiff \| tree
2018-03-20	Vedran Miletić	Document matrix_convert function in PBC	commit \| commitdiff \| tree
2018-03-12	Szilárd Páll	Avoid icc-specific -march=core-avx2 flag with gcc/clang	commit \| commitdiff \| tree
2018-03-06	Szilárd Páll	Extend "Finding out how to run mdrun better" section	commit \| commitdiff \| tree
2018-03-06	Aleksei Iupinov	Isolate PME GPU spline parameter indexing in inline...	commit \| commitdiff \| tree
2018-03-05	Aleksei Iupinov	Stop using custom FindOpenCL.cmake, per TODO	commit \| commitdiff \| tree
2018-03-05	Aleksei Iupinov	Correct the nbnxn_gpu_compile_kernels() docs	commit \| commitdiff \| tree
2018-02-21	Szilárd Páll	Switch pre-submit CUDA 8.0 test to 9.0	commit \| commitdiff \| tree
2018-02-20	Szilárd Páll	Avoid aborting mdrun when GPU sanity check detects...	commit \| commitdiff \| tree
2018-02-18	Aleksei Iupinov	Replace *_free_buffered calls by freeDeviceBuffer	commit \| commitdiff \| tree
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