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2014-08-23	Mark Abraham	Generalize markdown configuration machinery	commit \| commitdiff \| tree
2014-08-10	Roland Schulz	Merge release-4-6 into release-5-0	commit \| commitdiff \| tree
2014-08-04	Teemu Murtola	Verify MD5 sum for FFTW download	commit \| commitdiff \| tree
2014-06-28	Teemu Murtola	Remove overeager selection index group check	commit \| commitdiff \| tree
2014-05-01	Teemu Murtola	Fix incorrect limits in FloatOptionStorage	commit \| commitdiff \| tree
2014-04-04	Teemu Murtola	Remove ancient SGI-specific code	commit \| commitdiff \| tree
2014-04-04	Teemu Murtola	Clean up gmx_fatal.*	commit \| commitdiff \| tree
2014-03-30	Teemu Murtola	Clean up string2.h-related includes	commit \| commitdiff \| tree
2014-03-27	Teemu Murtola	Move include dependency checks to doc-check	commit \| commitdiff \| tree
2014-03-27	Teemu Murtola	Better automated Doxygen documentation checker	commit \| commitdiff \| tree
2014-03-27	Teemu Murtola	Misc. Doxygen fixes	commit \| commitdiff \| tree
2014-03-27	Teemu Murtola	Move thread_mpi to src/external/	commit \| commitdiff \| tree
2014-03-24	Teemu Murtola	Remove gmxpreprocess from include path	commit \| commitdiff \| tree
2014-03-08	Teemu Murtola	Remove some unnecessary declarations	commit \| commitdiff \| tree
2014-02-28	Teemu Murtola	Residual SIMD Doxygen improvements	commit \| commitdiff \| tree
2014-02-28	Teemu Murtola	Misc. Doxygen configuration changes	commit \| commitdiff \| tree
2014-02-26	Teemu Murtola	Fix GMX_PRIu32 and GMX_PRIu64 for MSVC	commit \| commitdiff \| tree
2014-02-25	Mark Abraham	Keep compilers happy on BG/Q	commit \| commitdiff \| tree
2014-02-15	Teemu Murtola	Fix some broken links in HTML pages	commit \| commitdiff \| tree
2014-02-09	Teemu Murtola	Shell completions through Options	commit \| commitdiff \| tree
2014-02-03	Mark Abraham	Add hack to fix genbox	commit \| commitdiff \| tree
2014-02-02	Teemu Murtola	Extend valgrind suppressions for OpenMPI	commit \| commitdiff \| tree
2014-01-30	Teemu Murtola	Overview docs for using Gromacs as a library	commit \| commitdiff \| tree
2014-01-30	Teemu Murtola	Rename ProgramInfo to CommandLineProgramContext	commit \| commitdiff \| tree
2014-01-29	Teemu Murtola	Print common options to 'gmx -h'	commit \| commitdiff \| tree
2014-01-22	Teemu Murtola	Use local ProgramInfo in CommandLineModuleManager	commit \| commitdiff \| tree
2014-01-21	Teemu Murtola	Remove unused split.h	commit \| commitdiff \| tree
2014-01-20	Teemu Murtola	Fix test reference data	commit \| commitdiff \| tree
2014-01-05	Teemu Murtola	Support for default values for SelectionOption	commit \| commitdiff \| tree
2013-12-30	Teemu Murtola	More robust shell detection in GMXRC	commit \| commitdiff \| tree
2013-12-29	Teemu Murtola	Minor vec.h cleanup	commit \| commitdiff \| tree
2013-12-24	Teemu Murtola	Get rid of set_default_file_name()	commit \| commitdiff \| tree
2013-12-24	Roland Schulz	Rename remaining large_int to int64	commit \| commitdiff \| tree
2013-12-23	Roland Schulz	Replace gmx_large_int_t with gmx_int64_t	commit \| commitdiff \| tree
2013-12-16	Erik Lindahl	Moved OpenMP detection to separate file.	commit \| commitdiff \| tree
2013-12-08	Teemu Murtola	Don't create symlinks in the build tree	commit \| commitdiff \| tree
2013-12-04	Teemu Murtola	Fix test build with GMX_BUILD_MDRUN_ONLY	commit \| commitdiff \| tree
2013-11-29	Berk Hess	Created SIMD module	commit \| commitdiff \| tree
2013-11-20	Teemu Murtola	Update copyright headers in kernels.	commit \| commitdiff \| tree
2013-11-20	Teemu Murtola	Update copyright headers in generated kernels.	commit \| commitdiff \| tree
2013-11-20	Teemu Murtola	Script to automatically update copyright	commit \| commitdiff \| tree
2013-11-17	Teemu Murtola	Reformat existing LGPL copyright notices.	commit \| commitdiff \| tree
2013-10-30	Alexey Shvetsov	gromacs cpp: clean up -Wunused-parameter warnings	commit \| commitdiff \| tree
2013-10-18	Teemu Murtola	Upgrade layout file to support Doxygen >=1.8.	commit \| commitdiff \| tree
2013-10-07	Teemu Murtola	Improve markup substitution in HelpWriterContext.	commit \| commitdiff \| tree
2013-09-28	Teemu Murtola	Use git version info in Doxygen.	commit \| commitdiff \| tree
2013-09-24	Teemu Murtola	Remove old generated HTML files.	commit \| commitdiff \| tree
2013-09-24	Teemu Murtola	Remove src/contrib/prfn.c and related code.	commit \| commitdiff \| tree
2013-09-23	Teemu Murtola	Remove obsolete tools.	commit \| commitdiff \| tree
2013-09-20	Teemu Murtola	Merge branch 'release-4-6'	commit \| commitdiff \| tree
2013-09-06	Teemu Murtola	Support for parallel data modules.	commit \| commitdiff \| tree
2013-08-24	Teemu Murtola	[RFC] Really uniform startup path for all binaries.	commit \| commitdiff \| tree
2013-07-22	Teemu Murtola	Fix Doxygen warnings.	commit \| commitdiff \| tree
2013-07-21	Teemu Murtola	More files to C++.	commit \| commitdiff \| tree
2013-06-28	Teemu Murtola	Fix overeager VdW radii change note.	commit \| commitdiff \| tree
2013-06-27	Teemu Murtola	Proper C++ API for analysis neighborhood search.	commit \| commitdiff \| tree
2013-06-27	Teemu Murtola	Fix some issues found by cppcheck-1.58.	commit \| commitdiff \| tree
2013-06-27	Teemu Murtola	More binaries into the wrapper binary.	commit \| commitdiff \| tree
2013-05-24	Teemu Murtola	Merge branch 'release-4-6'	commit \| commitdiff \| tree
2013-04-19	Teemu Murtola	Merge branch 'release-4-5-patches'	commit \| commitdiff \| tree
2013-04-10	Teemu Murtola	Fix another bug in selection subexpression handling.	commit \| commitdiff \| tree
2013-04-10	Teemu Murtola	Fix bug in selection subexpression handling.	commit \| commitdiff \| tree
2013-04-10	Teemu Murtola	Fix another bug in selection subexpression handling.	commit \| commitdiff \| tree
2013-04-07	Teemu Murtola	Fix bug in selection subexpression handling.	commit \| commitdiff \| tree
2013-03-26	Teemu Murtola	Improve master-specific CMake behavior.	commit \| commitdiff \| tree
2013-03-26	Teemu Murtola	Add histogram output for 'gmx gangle'.	commit \| commitdiff \| tree
2013-03-24	Teemu Murtola	Merge libgmxana into libgromacs.	commit \| commitdiff \| tree
2013-03-08	Teemu Murtola	Better test assertions for exceptions.	commit \| commitdiff \| tree
2013-03-07	Teemu Murtola	Improve enum option interface.	commit \| commitdiff \| tree
2013-03-07	Teemu Murtola	More flexible handling of enum option descriptions.	commit \| commitdiff \| tree
2013-03-07	Teemu Murtola	Fix copyright notices for new C++ code.	commit \| commitdiff \| tree
2013-03-07	Teemu Murtola	Update my e-mail address on author lines.	commit \| commitdiff \| tree
2013-02-25	Teemu Murtola	Uncrustify template.cpp and selection.cpp.	commit \| commitdiff \| tree
2013-02-10	Teemu Murtola	Manual reformatting in preparation for uncrustify.	commit \| commitdiff \| tree
2013-01-13	Teemu Murtola	Remove unused bfunc.h.	commit \| commitdiff \| tree
2012-12-30	Teemu Murtola	Remove non-functional PowerPC invsqrt.	commit \| commitdiff \| tree
2012-12-30	Teemu Murtola	Remove superfluous memory allocation.	commit \| commitdiff \| tree
2012-12-21	Teemu Murtola	Make gmx_cpuid.h self-standing.	commit \| commitdiff \| tree
2012-12-21	Teemu Murtola	Remove non-functional compiler override for MacOSX.	commit \| commitdiff \| tree
2012-12-17	Teemu Murtola	Fix license text printed by programs.	commit \| commitdiff \| tree
2012-12-06	Teemu Murtola	Fix build of template and other external code.	commit \| commitdiff \| tree
2012-11-25	Teemu Murtola	Extended build information output and reference build...	commit \| commitdiff \| tree
2012-11-10	Teemu Murtola	Option to create symlinks to g_ana.	commit \| commitdiff \| tree
2012-11-10	Teemu Murtola	Always use relative install paths.	commit \| commitdiff \| tree
2012-11-10	Teemu Murtola	Remove obsolete GMX_THREAD_SHM_FDECOMP.	commit \| commitdiff \| tree
2012-11-08	Teemu Murtola	Include Gromacs files with double quotes in C++ code.	commit \| commitdiff \| tree
2012-11-08	Teemu Murtola	Remove unnecessary config.h includes in C++ code.	commit \| commitdiff \| tree
2012-10-16	Teemu Murtola	Script for analyzing include dependencies.	commit \| commitdiff \| tree
2012-10-15	Teemu Murtola	Clean up g_ana angle implementation.	commit \| commitdiff \| tree
2012-10-15	Teemu Murtola	Extract Doxygen docs for anonymous namespaces.	commit \| commitdiff \| tree
2012-10-15	Teemu Murtola	Fix most warnings with Doxygen 1.8.1.1.	commit \| commitdiff \| tree
2012-10-15	Teemu Murtola	Remove explicit end-of-array markers from tests.	commit \| commitdiff \| tree
2012-10-02	Teemu Murtola	More thorough unit tests for plus/merge selections.	commit \| commitdiff \| tree
2012-09-28	Teemu Murtola	Remove unused code.	commit \| commitdiff \| tree
2012-09-24	Teemu Murtola	Add pdbname selection keyword.	commit \| commitdiff \| tree
2012-09-24	Teemu Murtola	Add pdbname selection keyword.	commit \| commitdiff \| tree
2012-09-18	Teemu Murtola	Fixes for numeric and position selection variables.	commit \| commitdiff \| tree
2012-09-18	Teemu Murtola	Add some valgrind suppressions for Mac.	commit \| commitdiff \| tree
2012-09-16	Teemu Murtola	Fix insolidangle selections near poles.	commit \| commitdiff \| tree
2012-09-13	Teemu Murtola	Fix some memory leaks.	commit \| commitdiff \| tree
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