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2017-01-06	Mark Abraham	Document ISerializer class	commit \| commitdiff \| tree
2017-01-05	Roland Schulz	Fix unitialized memory access	commit \| commitdiff \| tree
2017-01-04	Mark Abraham	Stop trying to use objdump --reloc on Mac	commit \| commitdiff \| tree
2017-01-04	Mark Abraham	Fix documentation of OptionsVisitor	commit \| commitdiff \| tree
2017-01-03	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-12-20	Mark Abraham	Corrected documentation about eigenvalue handling	commit \| commitdiff \| tree
2016-12-20	Mark Abraham	Sanitize some include headers	commit \| commitdiff \| tree
2016-12-20	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-12-10	Teemu Murtola	Build scripts for improved release workflow	commit \| commitdiff \| tree
2016-12-09	Mark Abraham	Remove nxframe from t_trxstatus	commit \| commitdiff \| tree
2016-12-09	Szilárd Páll	Turn off hwloc support when static lib found	commit \| commitdiff \| tree
2016-12-08	Berk Hess	Made mdrun -pforce terminate with non-finite forces	commit \| commitdiff \| tree
2016-12-08	Teemu Murtola	Fix possible memory error with long selections	commit \| commitdiff \| tree
2016-12-08	Mark Abraham	Consolidate files supporting TNG file I/O	commit \| commitdiff \| tree
2016-12-07	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-12-07	David van der Spoel	Couple of new quotes	commit \| commitdiff \| tree
2016-12-07	Teemu Murtola	Fix use of position variables with plus/merge	commit \| commitdiff \| tree
2016-12-07	Mark Abraham	Fix memory handling in gmx dump of TNG files	commit \| commitdiff \| tree
2016-12-05	Mark Abraham	Remove undue narrowing of integer in TNG reading	commit \| commitdiff \| tree
2016-12-01	Mark Abraham	Fix minor trjconv bug	commit \| commitdiff \| tree
2016-11-24	Berk Hess	Change spline moduli calculation to double	commit \| commitdiff \| tree
2016-11-16	Carsten Kutzner	Increased the default reset step to 1500 in gmx tune_pme	commit \| commitdiff \| tree
2016-11-16	Mark Abraham	Remove unimplemented gmx trjcat -vel	commit \| commitdiff \| tree
2016-11-08	Dan Horák	Fix x86 conditional	commit \| commitdiff \| tree
2016-11-01	Aleksei Iupinov	Remove imatrix type and related unused/erroneous code	commit \| commitdiff \| tree
2016-10-31	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-10-31	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-10-28	Mark Abraham	Bumped version to prepare for next patch release	commit \| commitdiff \| tree
2016-10-28	Mark Abraham	Version 2016.1	commit \| commitdiff \| tree
2016-10-28	Berk Hess	DLB can now turn off, when slower	commit \| commitdiff \| tree
2016-10-28	Szilárd Páll	GPU-related additions to the install/user guide	commit \| commitdiff \| tree
2016-10-28	Berk Hess	Fix DLB timing with CUDA and OpenCL	commit \| commitdiff \| tree
2016-10-27	Szilárd Páll	Make -cl-fast-relaxed-math default	commit \| commitdiff \| tree
2016-10-21	Mark Abraham	Update install guide	commit \| commitdiff \| tree
2016-10-21	Mark Abraham	Update cppcheck support to 1.76.1	commit \| commitdiff \| tree
2016-10-19	Teemu Murtola	Serialization support for KeyValueTree	commit \| commitdiff \| tree
2016-10-19	Mark Abraham	Upgrade coverage matrix.	commit \| commitdiff \| tree
2016-10-18	Mark Abraham	Fix SIMD suggestion for VMX	commit \| commitdiff \| tree
2016-10-17	Erik Lindahl	New classes for spline interpolation tables	commit \| commitdiff \| tree
2016-10-16	Teemu Murtola	Improved error handling for KeyValueTree operations	commit \| commitdiff \| tree
2016-10-14	Teemu Murtola	Use gmx_mtop_t in selections, part 2	commit \| commitdiff \| tree
2016-10-13	Teemu Murtola	Add back-mapping to KeyValueTreeTransform	commit \| commitdiff \| tree
2016-10-13	Teemu Murtola	Update bundled TNG	commit \| commitdiff \| tree
2016-10-12	Teemu Murtola	Use gmx_mtop_t in selections, part 1	commit \| commitdiff \| tree
2016-10-12	Teemu Murtola	Wrap sel. method evaluation parameters to struct	commit \| commitdiff \| tree
2016-10-12	Berk Hess	Fixed print bug in gmx wham	commit \| commitdiff \| tree
2016-10-11	James W. Barnett	fix typo	commit \| commitdiff \| tree
2016-10-11	Teemu Murtola	Check atom mass availability in selections	commit \| commitdiff \| tree
2016-10-10	Mark Abraham	Merge "Merge branch release-2016"	commit \| commitdiff \| tree
2016-10-09	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-10-07	Mark Abraham	Add script for Jenkins regressiontest update job	commit \| commitdiff \| tree
2016-10-06	Carlo Camilloni	Always update mdatoms when doing energy minimisation	commit \| commitdiff \| tree
2016-10-03	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-10-03	Mark Abraham	Replace use of deprecated readdir_r	commit \| commitdiff \| tree
2016-09-28	Jochen Hub	Fixed bug in gmx wham for reading pullx files.	commit \| commitdiff \| tree
2016-09-27	David van der Spoel	Fixed script xplor2gmx.pl to work with GMXDATA	commit \| commitdiff \| tree
2016-09-08	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-09-08	Mark Abraham	Bumped patch number to prepare for future 5.1.5 release	commit \| commitdiff \| tree
2016-09-07	Mark Abraham	Version 5.1.4	commit \| commitdiff \| tree
2016-09-07	Mark Abraham	Removed HIS1 from oplsaa and charmm definitions	commit \| commitdiff \| tree
2016-09-07	Erik Lindahl	Bump oldest cmake, compiler and CUDA versions required	commit \| commitdiff \| tree
2016-09-06	Mark Abraham	Work around glibc 2.23 with CUDA	commit \| commitdiff \| tree
2016-09-06	Berk Hess	Consolidate MD algorithm atom setup	commit \| commitdiff \| tree
2016-09-02	Berk Hess	Fix Parrinello-Rahman with nstpcouple>1	commit \| commitdiff \| tree
2016-08-30	Teemu Murtola	Basic support for transforming KeyValueTrees	commit \| commitdiff \| tree
2016-08-30	Berk Hess	Make virial reproducible	commit \| commitdiff \| tree
2016-08-18	Teemu Murtola	Check for unused refdata values	commit \| commitdiff \| tree
2016-08-18	Teemu Murtola	Generic structured key-value tree for options	commit \| commitdiff \| tree
2016-08-18	Teemu Murtola	Support for non-string option value assignment	commit \| commitdiff \| tree
2016-08-17	Teemu Murtola	Basic support for array-of-structs in options	commit \| commitdiff \| tree
2016-08-17	Teemu Murtola	Generalize and simplify option value storage	commit \| commitdiff \| tree
2016-08-17	Teemu Murtola	Generalize option section internals	commit \| commitdiff \| tree
2016-08-17	Teemu Murtola	Reimplement subsections in Options	commit \| commitdiff \| tree
2016-08-15	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-08-15	Mark Abraham	Fixes for BG/Q platform files and install guide	commit \| commitdiff \| tree
2016-08-15	Berk Hess	Reduce FE pair-list memory usage	commit \| commitdiff \| tree
2016-08-12	Mark Abraham	Bump number to prepare for first patch release	commit \| commitdiff \| tree
2016-08-04	Mark Abraham	Version 2016	commit \| commitdiff \| tree
2016-08-03	David van der Spoel	Three new quotes.	commit \| commitdiff \| tree
2016-08-03	Vedran Miletić	Use only legal characters in OpenCL cache filename	commit \| commitdiff \| tree
2016-07-29	Mark Abraham	Improve handling of gmock and gcc6	commit \| commitdiff \| tree
2016-07-29	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-07-29	David van der Spoel	Fixes incorrect charges in OPLS/AA-L for HISD and HISE	commit \| commitdiff \| tree
2016-07-28	Mark Abraham	Add toolchain flags for SSE2 compilation	commit \| commitdiff \| tree
2016-07-21	Mark Abraham	Bumped patch number to prepare for future 5.1.4 release	commit \| commitdiff \| tree
2016-07-14	Mark Abraham	Fix issues with using int for number of steps	commit \| commitdiff \| tree
2016-07-13	Mark Abraham	Version 5.1.3	commit \| commitdiff \| tree
2016-07-12	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-07-12	Mark Abraham	Fix trr magic number reading	commit \| commitdiff \| tree
2016-07-11	Mark Abraham	Fix gmx mdrun -membed -ntmpi -1	commit \| commitdiff \| tree
2016-07-11	Erik Lindahl	Fix membed with partial revert of 29943f	commit \| commitdiff \| tree
2016-07-11	Michael Shirts	Fix for incorrectly setting expanded ensemble when...	commit \| commitdiff \| tree
2016-07-11	Mark Abraham	Fix regressiontest download md5sum	commit \| commitdiff \| tree
2016-07-09	Mark Abraham	First 2016 release candidate	commit \| commitdiff \| tree
2016-07-09	Erik Lindahl	Hardware detection clean-up and pre/post-processing	commit \| commitdiff \| tree
2016-07-08	Jochen Hub	Updated g_wham for the new pull setup	commit \| commitdiff \| tree
2016-07-08	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-07-08	David van der Spoel	Introduce fatal error for too few frames in gmx dos.	commit \| commitdiff \| tree
2016-07-08	Mark Abraham	Simplify SIMD compiler flag construction	commit \| commitdiff \| tree
2016-07-08	Erik Lindahl	Add detection for ARMv7 cycle counter support	commit \| commitdiff \| tree
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