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Introduced system preparation section to user guide
2017-02-07 Mark AbrahamIntroduced system preparation section to user guide
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2017-02-07 Mark AbrahamVersion 2016.2
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2017-02-05 Mark AbrahamMerge branch release-5-1 into release-2016
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2017-02-02 Mark AbrahamClarify use of tau-p and pcoupltype
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2017-01-31 Mark AbrahamMerge branch release-5-1 into release-2016
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2017-01-30 Mark AbrahamFix multi-domain reruns
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2017-01-30 Mark AbrahamDon't print invalid performance data
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2017-01-22 Mark AbrahamFixed gmx rmsf -q -oq.
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2017-01-04 Mark AbrahamStop trying to use objdump --reloc on Mac
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2017-01-03 Mark AbrahamMerge branch release-5-1 into release-2016
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2016-12-20 Mark AbrahamCorrected documentation about eigenvalue handling
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2016-12-20 Mark AbrahamImprove build system for plugin support
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2016-12-15 Mark AbrahamHandle warninp correctly in xpm2ps and membed
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2016-12-14 Mark AbrahamFix misleading parallelization docs for gmx wham
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2016-12-09 Mark AbrahamFix logic of TRR reading
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2016-12-07 Mark AbrahamFix memory handling in gmx dump of TNG files
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2016-12-05 Mark AbrahamRemove undue narrowing of integer in TNG reading
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2016-12-01 Mark AbrahamFix minor trjconv bug
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2016-10-28 Mark AbrahamBumped version to prepare for next patch release
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2016-10-28 Mark AbrahamVersion 2016.1
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2016-10-21 Mark AbrahamUpdate install guide
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2016-10-18 Mark AbrahamFix SIMD suggestion for VMX
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2016-10-11 Mark AbrahamUpdate for FFTW 3.3.5
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2016-10-07 Mark AbrahamAdd script for Jenkins regressiontest update job
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2016-10-03 Mark AbrahamMerge branch release-5-1 into release-2016
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2016-10-03 Mark AbrahamReplace use of deprecated readdir_r
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2016-09-08 Mark AbrahamMerge branch release-5-1 into release-2016
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2016-09-08 Mark AbrahamBumped patch number to prepare for future 5.1.5 release
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2016-09-07 Mark AbrahamVersion 5.1.4
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2016-09-07 Mark AbrahamRemoved HIS1 from oplsaa and charmm definitions
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2016-09-07 Mark AbrahamFix LYN charges in amber03
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2016-09-07 Mark AbrahamFix amber03 HIP charges
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2016-09-06 Mark AbrahamWork around glibc 2.23 with CUDA
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2016-08-27 Mark AbrahamStop using gmx_fatal in grompp
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2016-08-15 Mark AbrahamFixes for BG/Q platform files and install guide
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2016-08-12 Mark AbrahamBump number to prepare for first patch release
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2016-08-04 Mark AbrahamVersion 2016
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2016-07-29 Mark AbrahamImprove handling of gmock and gcc6
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2016-07-29 Mark AbrahamMerge branch release-5-1 into release-2016
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2016-07-28 Mark AbrahamAdd toolchain flags for SSE2 compilation
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2016-07-21 Mark AbrahamBumped patch number to prepare for future 5.1.4 release
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2016-07-14 Mark AbrahamFix issues with using int for number of steps
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2016-07-13 Mark AbrahamVersion 5.1.3
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2016-07-12 Mark AbrahamFix trr magic number reading
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2016-07-11 Mark AbrahamFix gmx mdrun -membed -ntmpi -1
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2016-07-11 Mark AbrahamFix regressiontest download md5sum
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2016-07-09 Mark AbrahamFirst 2016 release candidate
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2016-07-08 Mark AbrahamMerge branch release-5-1 into release-2016
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2016-07-08 Mark AbrahamSimplify SIMD compiler flag construction
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2016-07-07 Mark AbrahamMove consistency check for number of threads
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2016-07-07 Mark AbrahamFix build if libcuda is found but nvcc is not
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2016-07-04 Mark AbrahamFixes for Power7 big-endian
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2016-07-01 Mark AbrahamFix use of _POSIX_THREAD*
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2016-06-30 Mark AbrahamMerge branch release-5-1 into release-2016
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2016-06-29 Mark AbrahamRefactor sysconf checking
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2016-06-29 Mark AbrahamWork around glibc 2.23 with CUDA
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2016-06-28 Mark AbrahamUpdate to include a gcc 6.1 configuration
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2016-06-28 Mark AbrahamFix SIMD configuration management
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2016-06-27 Mark AbrahamRemoved unnecessary inter-simulation signalling
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2016-06-27 Mark AbrahamMerge branch release-5-1 into release-2016
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2016-06-23 Mark AbrahamAllow use of external lmfit package
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2016-06-23 Mark AbrahamPrevent use of mdrun -maxh -multi
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2016-06-22 Mark AbrahamFix configuration-time cpuinfo code
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2016-06-22 Mark AbrahamMerge branch release-5-1 into release-2016
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2016-06-22 Mark AbrahamAdjust and document C++11 compiler tests
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2016-06-20 Mark AbrahamUpdate pre-submit matrix contents
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2016-06-19 Mark AbrahamImprove docs for linking stdlibc++ needed by icc
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2016-06-17 Mark AbrahamMerge branch release-5-1 into release-2016
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2016-06-17 Mark AbrahamFix multi-sim + DD + simple distance restraints
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2016-06-10 Mark AbrahamFind python for docs build quietly
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2016-06-08 Mark AbrahamMerge branch release-5-1 into release-2016
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2016-06-07 Mark AbrahamRe-add support for linking against external TinyXML-2
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2016-06-07 Mark AbrahamUpdates to documentation
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2016-06-02 Mark AbrahamFix compatibility with older CMake
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2016-06-02 Mark AbrahamMake more CMake variables advanced
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2016-06-02 Mark AbrahamIgnore stderr when detecting SIMD and build info
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2016-05-31 Mark AbrahamFix reference to vmdio.c to be vmdio.cpp
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2016-05-31 Mark AbrahamSecond 2016 beta release
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2016-05-29 Mark AbrahamSimplified and updated OpenCL compilation
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2016-05-27 Mark AbrahamFix reading of bonded tables
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2016-05-26 Mark AbrahamNew quote
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2016-05-12 Mark AbrahamMerge branch release-5-1 into release-2016
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2016-05-12 Mark AbrahamGROMACS 2016 beta1 release
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2016-05-10 Mark AbrahamBump clang static analyzer to version 3.8
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2016-05-10 Mark AbrahamMinor update to sphinx dependency
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2016-05-10 Mark AbrahamFacilitate linking with libcxx
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2016-05-08 Mark AbrahamFixes for clang 3.7 on PowerPC
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2016-05-08 Mark AbrahamFix constants, units and conversion factors
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2016-04-27 Mark AbrahamMerge branch release-5-1
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2016-04-19 Mark AbrahamReplace libxml2 with tinyxml2 for use in test code
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2016-04-19 Mark AbrahamFix parse_digits_from_string
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2016-04-19 Mark AbrahamFix mdp label generation
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2016-04-18 Mark AbrahamReduce compilation coupling of SIMD module
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2016-04-14 Mark AbrahamMerge branch release-5-1
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2016-04-01 Mark AbrahamRevert to treating -1 as "generate a seed" in .mdp
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2016-03-31 Mark AbrahamAdd test and improved docs for custom checkSequence
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2016-03-30 Mark AbrahamClean up vsite code
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2016-03-19 Mark AbrahamAdd more const correctness
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2016-03-19 Mark AbrahamFix warning from GCC 6
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2016-03-19 Mark AbrahamImproved some mdrun integration tests
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The ultimate molecular dynamics simulation package