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2017-02-09	Mark Abraham	Improved state_change_natoms and used it more	commit \| commitdiff \| tree
2017-02-09	Mark Abraham	Remove EST_DISTR from state.h	commit \| commitdiff \| tree
2017-02-09	Mark Abraham	Enhance warninp	commit \| commitdiff \| tree
2017-02-08	Mark Abraham	Extend serialization to gmx_int64_t	commit \| commitdiff \| tree
2017-02-08	Mark Abraham	Create applied-forces module group	commit \| commitdiff \| tree
2017-02-08	Mark Abraham	Give MDModules responsibility for option handling	commit \| commitdiff \| tree
2017-02-07	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2017-02-07	Mark Abraham	Bumped version to prepare for next patch release	commit \| commitdiff \| tree
2017-02-07	Mark Abraham	Introduced system preparation section to user guide	commit \| commitdiff \| tree
2017-02-07	Mark Abraham	Version 2016.2	commit \| commitdiff \| tree
2017-02-05	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2017-02-03	Mark Abraham	Remove typedef struct in some mdtypes files	commit \| commitdiff \| tree
2017-02-02	Mark Abraham	Clarify use of tau-p and pcoupltype	commit \| commitdiff \| tree
2017-01-31	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2017-01-30	Mark Abraham	Fix multi-domain reruns	commit \| commitdiff \| tree
2017-01-30	Mark Abraham	Don't print invalid performance data	commit \| commitdiff \| tree
2017-01-23	Mark Abraham	Stopped header files including state.h	commit \| commitdiff \| tree
2017-01-22	Mark Abraham	Fixed gmx rmsf -q -oq.	commit \| commitdiff \| tree
2017-01-21	Mark Abraham	Removed init_state	commit \| commitdiff \| tree
2017-01-20	Mark Abraham	Initialize GMX_*_LIBRARIES cmake variables earlier	commit \| commitdiff \| tree
2017-01-14	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2017-01-06	Mark Abraham	Document ISerializer class	commit \| commitdiff \| tree
2017-01-04	Mark Abraham	Stop trying to use objdump --reloc on Mac	commit \| commitdiff \| tree
2017-01-04	Mark Abraham	Fix documentation of OptionsVisitor	commit \| commitdiff \| tree
2017-01-03	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-12-20	Mark Abraham	Corrected documentation about eigenvalue handling	commit \| commitdiff \| tree
2016-12-20	Mark Abraham	Improve build system for plugin support	commit \| commitdiff \| tree
2016-12-20	Mark Abraham	Sanitize some include headers	commit \| commitdiff \| tree
2016-12-20	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-12-15	Mark Abraham	Removed support for multiple entries in mdp files	commit \| commitdiff \| tree
2016-12-15	Mark Abraham	Handle warninp correctly in xpm2ps and membed	commit \| commitdiff \| tree
2016-12-14	Mark Abraham	Fix misleading parallelization docs for gmx wham	commit \| commitdiff \| tree
2016-12-09	Mark Abraham	Fix logic of TRR reading	commit \| commitdiff \| tree
2016-12-09	Mark Abraham	Remove nxframe from t_trxstatus	commit \| commitdiff \| tree
2016-12-08	Mark Abraham	Consolidate files supporting TNG file I/O	commit \| commitdiff \| tree
2016-12-07	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-12-07	Mark Abraham	Fix memory handling in gmx dump of TNG files	commit \| commitdiff \| tree
2016-12-05	Mark Abraham	Remove undue narrowing of integer in TNG reading	commit \| commitdiff \| tree
2016-12-01	Mark Abraham	Add INSTALL-dev to aid people doing unusual builds	commit \| commitdiff \| tree
2016-12-01	Mark Abraham	Fix minor trjconv bug	commit \| commitdiff \| tree
2016-11-23	Mark Abraham	Stop including tng_io_fwd.h	commit \| commitdiff \| tree
2016-11-16	Mark Abraham	Enhanced ArrayRef	commit \| commitdiff \| tree
2016-11-16	Mark Abraham	Created paddedvector.h	commit \| commitdiff \| tree
2016-11-16	Mark Abraham	Remove unimplemented gmx trjcat -vel	commit \| commitdiff \| tree
2016-10-31	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-10-31	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-10-28	Mark Abraham	Bumped version to prepare for next patch release	commit \| commitdiff \| tree
2016-10-28	Mark Abraham	Version 2016.1	commit \| commitdiff \| tree
2016-10-21	Mark Abraham	Update install guide	commit \| commitdiff \| tree
2016-10-21	Mark Abraham	Update cppcheck support to 1.76.1	commit \| commitdiff \| tree
2016-10-19	Mark Abraham	Upgrade coverage matrix.	commit \| commitdiff \| tree
2016-10-18	Mark Abraham	Fix SIMD suggestion for VMX	commit \| commitdiff \| tree
2016-10-12	Mark Abraham	Make regressiontests updater build work for master...	commit \| commitdiff \| tree
2016-10-11	Mark Abraham	Update for FFTW 3.3.5	commit \| commitdiff \| tree
2016-10-10	Mark Abraham	Merge "Merge branch release-2016"	commit \| commitdiff \| tree
2016-10-09	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-10-07	Mark Abraham	Add script for Jenkins regressiontest update job	commit \| commitdiff \| tree
2016-10-03	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-10-03	Mark Abraham	Replace use of deprecated readdir_r	commit \| commitdiff \| tree
2016-09-12	Mark Abraham	Preliminary clean up of NVML code	commit \| commitdiff \| tree
2016-09-08	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-09-08	Mark Abraham	Bumped patch number to prepare for future 5.1.5 release	commit \| commitdiff \| tree
2016-09-07	Mark Abraham	Version 5.1.4	commit \| commitdiff \| tree
2016-09-07	Mark Abraham	Removed HIS1 from oplsaa and charmm definitions	commit \| commitdiff \| tree
2016-09-07	Mark Abraham	Fix LYN charges in amber03	commit \| commitdiff \| tree
2016-09-07	Mark Abraham	Fix amber03 HIP charges	commit \| commitdiff \| tree
2016-09-06	Mark Abraham	Work around glibc 2.23 with CUDA	commit \| commitdiff \| tree
2016-08-27	Mark Abraham	Stop using gmx_fatal in grompp	commit \| commitdiff \| tree
2016-08-24	Mark Abraham	Remove hacks for outdated BlueGene support	commit \| commitdiff \| tree
2016-08-15	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-08-15	Mark Abraham	Fixes for BG/Q platform files and install guide	commit \| commitdiff \| tree
2016-08-12	Mark Abraham	Bump number to prepare for first patch release	commit \| commitdiff \| tree
2016-08-04	Mark Abraham	Version 2016	commit \| commitdiff \| tree
2016-07-29	Mark Abraham	Improve handling of gmock and gcc6	commit \| commitdiff \| tree
2016-07-29	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-07-28	Mark Abraham	Add toolchain flags for SSE2 compilation	commit \| commitdiff \| tree
2016-07-21	Mark Abraham	Bumped patch number to prepare for future 5.1.4 release	commit \| commitdiff \| tree
2016-07-14	Mark Abraham	Fix issues with using int for number of steps	commit \| commitdiff \| tree
2016-07-13	Mark Abraham	Version 5.1.3	commit \| commitdiff \| tree
2016-07-12	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-07-12	Mark Abraham	Fix trr magic number reading	commit \| commitdiff \| tree
2016-07-11	Mark Abraham	Fix gmx mdrun -membed -ntmpi -1	commit \| commitdiff \| tree
2016-07-11	Mark Abraham	Fix regressiontest download md5sum	commit \| commitdiff \| tree
2016-07-09	Mark Abraham	First 2016 release candidate	commit \| commitdiff \| tree
2016-07-08	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-07-08	Mark Abraham	Simplify SIMD compiler flag construction	commit \| commitdiff \| tree
2016-07-07	Mark Abraham	Move consistency check for number of threads	commit \| commitdiff \| tree
2016-07-07	Mark Abraham	Fix build if libcuda is found but nvcc is not	commit \| commitdiff \| tree
2016-07-04	Mark Abraham	Fixes for Power7 big-endian	commit \| commitdiff \| tree
2016-07-01	Mark Abraham	Fix use of _POSIX_THREAD*	commit \| commitdiff \| tree
2016-06-30	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-06-29	Mark Abraham	Refactor sysconf checking	commit \| commitdiff \| tree
2016-06-29	Mark Abraham	Work around glibc 2.23 with CUDA	commit \| commitdiff \| tree
2016-06-28	Mark Abraham	Update to include a gcc 6.1 configuration	commit \| commitdiff \| tree
2016-06-28	Mark Abraham	Fix SIMD configuration management	commit \| commitdiff \| tree
2016-06-27	Mark Abraham	Removed unnecessary inter-simulation signalling	commit \| commitdiff \| tree
2016-06-27	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-06-23	Mark Abraham	Merge branch release-2016	commit \| commitdiff \| tree
2016-06-23	Mark Abraham	Allow use of external lmfit package	commit \| commitdiff \| tree
2016-06-23	Mark Abraham	Prevent use of mdrun -maxh -multi	commit \| commitdiff \| tree
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