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2015-11-20	David van der Spoel	Moved mdatom.h from legacyheader/types to mdtypes.	commit \| commitdiff \| tree
2015-11-20	David van der Spoel	Moved legacyheaders/types/energy.h to mdtypes.	commit \| commitdiff \| tree
2015-11-15	David van der Spoel	Merged legacyheaders/types/inputrec.h into mdtypes...	commit \| commitdiff \| tree
2015-11-15	David van der Spoel	Merged legacyheaders/types/state.h into mdtypes/state.h	commit \| commitdiff \| tree
2015-11-13	David van der Spoel	Replaced atom_id by int.	commit \| commitdiff \| tree
2015-11-13	David van der Spoel	Moved genborn.h to mdlib	commit \| commitdiff \| tree
2015-11-12	David van der Spoel	Moved txtdump.* to fileio.	commit \| commitdiff \| tree
2015-11-12	David van der Spoel	Moved copyrite.* to fileio from gmxlib and legacyheaders.	commit \| commitdiff \| tree
2015-11-11	David van der Spoel	Moved inputrec.* from gmxlib and legacyheaders to mdtypes.	commit \| commitdiff \| tree
2015-11-10	David van der Spoel	Removed legacyheaders/typedefs.h	commit \| commitdiff \| tree
2015-11-03	David van der Spoel	Moved df_history utility routines from typedefs to...	commit \| commitdiff \| tree
2015-11-01	David van der Spoel	Replaced NOTSET from typedefs.h by local solutions.	commit \| commitdiff \| tree
2015-10-23	David van der Spoel	Removed energyhistory code from typedefs to a separate...	commit \| commitdiff \| tree
2015-10-18	David van der Spoel	Moved pbc/cut-off related utilities from typedefs to...	commit \| commitdiff \| tree
2015-10-15	David van der Spoel	Freed memory in legacy statistics routines.	commit \| commitdiff \| tree
2015-10-03	David van der Spoel	Removed simple.h	commit \| commitdiff \| tree
2015-10-02	David van der Spoel	Removed simple.h from nb_kernel_sse4_1_XX	commit \| commitdiff \| tree
2015-10-02	David van der Spoel	Removed simple.h from nb_kernel_sse2_XX	commit \| commitdiff \| tree
2015-10-02	David van der Spoel	Removed simple.h from nb_kernel_c and nb_kernel_sparc64_hpc...	commit \| commitdiff \| tree
2015-10-02	David van der Spoel	Removed include simple.h from nb_kernel_avx_128_fma_XX	commit \| commitdiff \| tree
2015-10-02	David van der Spoel	Removed simple.h from nb_kernel_avx_256_XX	commit \| commitdiff \| tree
2015-10-02	David van der Spoel	Removed output_env_t, now using gmx_output_env_t *...	commit \| commitdiff \| tree
2015-10-01	David van der Spoel	Removed types/nrnb.h from typedefs.h.	commit \| commitdiff \| tree
2015-09-30	David van der Spoel	Removed types/nblist.h and types/nsgrid.h from typedefs.h	commit \| commitdiff \| tree
2015-09-30	David van der Spoel	Removed types/mdatom.h from typedefs.h	commit \| commitdiff \| tree
2015-09-29	David van der Spoel	Removed types/inputrec.h from typedefs.h and releted...	commit \| commitdiff \| tree
2015-09-29	David van der Spoel	Fixes bug in the computation of Coefficient of Thermal...	commit \| commitdiff \| tree
2015-09-27	David van der Spoel	Removed types/forcerec.h from typedefs.h	commit \| commitdiff \| tree
2015-09-25	David van der Spoel	Removed include of types/ifunc.h from typedefs.h	commit \| commitdiff \| tree
2015-09-22	David van der Spoel	Removed four includes from legacyheaders/typedefs.h	commit \| commitdiff \| tree
2015-09-22	David van der Spoel	Removed legacyheaders/types/commrec_fwd.h from typedef.h	commit \| commitdiff \| tree
2015-09-10	David van der Spoel	Moved content from mdrun.h to separate headers.	commit \| commitdiff \| tree
2015-09-10	David van der Spoel	Removed <sys/types.h> and "types/constr.h" from typedefs	commit \| commitdiff \| tree
2015-09-09	David van der Spoel	Removed fileio/trx.h from typedefs.h	commit \| commitdiff \| tree
2015-09-08	David van der Spoel	Moved functions operating on forcerec to separate header.	commit \| commitdiff \| tree
2015-08-28	David van der Spoel	Added energy (edr) file type to Options headers.	commit \| commitdiff \| tree
2015-08-28	David van der Spoel	Added additional constructor to StringStream class...	commit \| commitdiff \| tree
2015-08-03	David van der Spoel	Made output from dumping neightborlists easier to read.	commit \| commitdiff \| tree
2015-07-31	David van der Spoel	Change initial parameters for testing expfit.	commit \| commitdiff \| tree
2015-07-29	David van der Spoel	Code for checking xvg files in testutils.	commit \| commitdiff \| tree
2015-04-17	David van der Spoel	Updated exponential fitting to make it robust.	commit \| commitdiff \| tree
2015-04-09	David van der Spoel	Clarified comments for time-dependent electric fields.	commit \| commitdiff \| tree
2015-04-08	David van der Spoel	Fixed incorrect output of gb_algorith as sa_algorithm.	commit \| commitdiff \| tree
2015-03-02	David van der Spoel	Updated documentation for electric fields.	commit \| commitdiff \| tree
2014-12-13	David van der Spoel	Four new quotes from around the world.	commit \| commitdiff \| tree
2014-11-28	David van der Spoel	Fixes recently introduced bug in gmx analyze.	commit \| commitdiff \| tree
2014-11-24	David van der Spoel	Added warnings for ewald-geometry and surface-epsilon	commit \| commitdiff \| tree
2014-10-28	David van der Spoel	Even more refreshing quotes.	commit \| commitdiff \| tree
2014-10-14	David van der Spoel	Reorganizing analysis of correlation functions.	commit \| commitdiff \| tree
2014-09-23	David van der Spoel	Fixes potential bug in neighborsearching.	commit \| commitdiff \| tree
2014-09-17	David van der Spoel	Merge release-5-0 into master	commit \| commitdiff \| tree
2014-09-10	David van der Spoel	Remove .tpa, .tpb, .tpx, .trj files. Part of #1500.	commit \| commitdiff \| tree
2014-08-30	David van der Spoel	Fixes issue with vsiten and verlet buffers.	commit \| commitdiff \| tree
2014-07-05	David van der Spoel	Fixed inconsistency in blocka handling.	commit \| commitdiff \| tree
2014-06-29	David van der Spoel	Fixes #1532, SEGV in g_current.	commit \| commitdiff \| tree
2014-06-25	David van der Spoel	Added check for domain decomposition and shells.	commit \| commitdiff \| tree
2014-06-24	David van der Spoel	Added check in grompp for shells and inputrec issues.	commit \| commitdiff \| tree
2014-06-22	David van der Spoel	Implemented fatal error for nstcalcenergy!=1 with shells.	commit \| commitdiff \| tree
2014-06-13	David van der Spoel	Fix memory-usage error in g_chi	commit \| commitdiff \| tree
2014-06-11	David van der Spoel	Fixes bug where -e and -dt flags did not work anymore.	commit \| commitdiff \| tree
2014-06-07	David van der Spoel	Merge "Merge release-5-0 into master"	commit \| commitdiff \| tree
2014-06-07	David van der Spoel	Merge release-5-0 into master	commit \| commitdiff \| tree
2014-06-02	David van der Spoel	Fixed wrong journal reference in manual	commit \| commitdiff \| tree
2014-05-31	David van der Spoel	Permit trjconv to read and write velocities with TNG...	commit \| commitdiff \| tree
2014-05-16	David van der Spoel	Fixes a complicated bug in g_anaeig.	commit \| commitdiff \| tree
2014-05-15	David van der Spoel	Added cmake profiling support	commit \| commitdiff \| tree
2014-04-02	David van der Spoel	Removed possibility of compiling with GSL.	commit \| commitdiff \| tree
2014-03-31	David van der Spoel	Fixed compilation issue in fgrid.cpp due to int/enum	commit \| commitdiff \| tree
2014-03-06	David van der Spoel	Six new quotes from classic literature.	commit \| commitdiff \| tree
2014-02-11	David van der Spoel	Fixed another vmdio issue.	commit \| commitdiff \| tree
2014-02-10	David van der Spoel	Moved conditional cmake code for vmdio.	commit \| commitdiff \| tree
2014-01-28	David van der Spoel	Moved random number generator code to separate dir.	commit \| commitdiff \| tree
2014-01-18	David van der Spoel	This patch moves the statistics library to its own...	commit \| commitdiff \| tree
2014-01-17	David van der Spoel	This patch moves preprocessing headers to gmxpreprocess	commit \| commitdiff \| tree
2014-01-15	David van der Spoel	This patch moves the nrama.[ch] to the gmxana dir.	commit \| commitdiff \| tree
2014-01-13	David van der Spoel	Cleaned up list of GROMACS authors	commit \| commitdiff \| tree
2014-01-09	David van der Spoel	Fixed precision in thermal expansion coefficient calc.	commit \| commitdiff \| tree
2013-12-23	David van der Spoel	Fixed compilation issue due to gcc4.8	commit \| commitdiff \| tree
2013-12-21	David van der Spoel	More Nobel quotes and others	commit \| commitdiff \| tree
2013-11-07	David van der Spoel	12 new quotes	commit \| commitdiff \| tree
2013-09-30	David van der Spoel	Change name of gmxdump to dump and gmxcheck to check	commit \| commitdiff \| tree
2013-09-29	David van der Spoel	Fixes bug in processing virtual_sitesn in grompp.	commit \| commitdiff \| tree
2013-09-26	David van der Spoel	Made MW of the Vsite particle type.	commit \| commitdiff \| tree
2013-09-21	David van der Spoel	Moved ngmx to C++, renamed it to view.	commit \| commitdiff \| tree
2013-08-30	David van der Spoel	Updated g_cluster	commit \| commitdiff \| tree
2013-07-24	David van der Spoel	Fixes #1312 uninitialized error in g_enemat.	commit \| commitdiff \| tree
2013-07-17	David van der Spoel	Added citation to free volume paper.	commit \| commitdiff \| tree
2013-06-14	David van der Spoel	New analysis tool to compute the free volume and total...	commit \| commitdiff \| tree
2013-05-30	David van der Spoel	Fixes #1194 error reading 4.5.5 tpr files with dihres	commit \| commitdiff \| tree
2013-05-16	David van der Spoel	Fixed two compilation issues.	commit \| commitdiff \| tree
2013-05-02	David van der Spoel	Fixes #1238 g_hydorder does not call set_pbc.	commit \| commitdiff \| tree
2013-05-01	David van der Spoel	Merge "Updated source for Van der Waals radii."	commit \| commitdiff \| tree
2013-04-25	David van der Spoel	Updated source for Van der Waals radii.	commit \| commitdiff \| tree
2013-04-16	David van der Spoel	Merge "corrected grompp rvdw charge-group radii check...	commit \| commitdiff \| tree
2013-04-13	David van der Spoel	Merge "added mdrun check for Verlet+perturbed atoms...	commit \| commitdiff \| tree
2013-04-12	David van der Spoel	Merge "Add histogram output for 'gmx gangle'."	commit \| commitdiff \| tree
2013-03-07	David van der Spoel	Fixes #1183 PBC bug in g_mindist	commit \| commitdiff \| tree
2013-02-15	David van der Spoel	Merge "Fixed an initialization issue in gmx_dipoles...	commit \| commitdiff \| tree
2013-02-13	David van der Spoel	Plain text quotes.	commit \| commitdiff \| tree
2013-01-14	David van der Spoel	Merge "Fixing trjconv -sub" into release-4-5-patches	commit \| commitdiff \| tree
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