3 # This file is part of the GROMACS molecular simulation package.
5 # Copyright (c) 2019,2020, by the GROMACS development team, led by
6 # Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
7 # and including many others, as listed in the AUTHORS file in the
8 # top-level source directory and at http://www.gromacs.org.
10 # GROMACS is free software; you can redistribute it and/or
11 # modify it under the terms of the GNU Lesser General Public License
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15 # GROMACS is distributed in the hope that it will be useful,
16 # but WITHOUT ANY WARRANTY; without even the implied warranty of
17 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
18 # Lesser General Public License for more details.
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21 # License along with GROMACS; if not, see
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29 # derived work must not be called official GROMACS. Details are found
30 # in the README & COPYING files - if they are missing, get the
31 # official version at http://www.gromacs.org.
33 # To help us fund GROMACS development, we humbly ask that you cite
34 # the research papers on the package. Check out http://www.gromacs.org.
36 # This script runs copyright header checks on modified files and
37 # reports/applies the necessary changes.
39 # See `copyright.sh -h` for a brief usage, and docs/dev-manual/code-formatting.rst
42 # Parse command-line arguments
44 echo "usage: copyright.sh [-f|--force] [--rev=REV]"
45 echo " [--copyright=<cmode>]"
46 echo " [--warnings=<file>] [<action>]"
47 echo "<action>: (check*|diff|update)[-(index|workdir*)] (*=default)"
48 echo "<cmode>: off|add|update*|replace|full"
51 action
="check-workdir"
53 baserev
="origin/master"
58 if [[ "$arg" == "check-index" ||
"$arg" == "check-workdir" || \
59 "$arg" == "diff-index" ||
"$arg" == "diff-workdir" || \
60 "$arg" == "update-index" ||
"$arg" == "update-workdir" ]]
63 elif [[ "$arg" == "check" ||
"$arg" == "diff" ||
"$arg" == "update" ]] ; then
65 elif [[ "$action" == diff-
* ]] ; then
67 elif [[ "$arg" == --copyright=* ]] ; then
68 copyright_mode
=${arg#--copyright=}
69 elif [[ "$arg" == "-f" ||
"$arg" == "--force" ]] ; then
71 elif [[ "$arg" == --rev=* ]] ; then
73 elif [[ "$arg" == --warnings=* ]] ; then
74 warning_file
=${arg#--warnings=}
75 elif [[ "$arg" == "-h" ||
"$arg" == "--help" ]] ; then
79 echo "Unknown option: $arg"
86 # Switch to the root of the source tree and check the config file
87 srcdir
=`git rev-parse --show-toplevel`
88 pushd $srcdir >/dev
/null
89 admin_dir
=$srcdir/admin
91 # Actual processing starts: create a temporary directory
92 tmpdir
=`mktemp -d -t gmxuncrust.XXXXXX`
94 # Produce a list of changed files
95 # Only include files that have proper filter set in .gitattributes
97 if [[ $action == *-index ]]
99 internal_diff_args
="--cached"
101 git diff-index
$internal_diff_args --diff-filter=ACMR
$baserev >$tmpdir/difflist
102 cut
-f2 <$tmpdir/difflist | \
103 git check-attr
--stdin filter | \
104 sed -e 's/.*: filter: //' | \
105 paste $tmpdir/difflist
- | \
106 grep -E '(complete_formatting|uncrustify|copyright|includesort)$' >$tmpdir/filtered
107 cut
-f2 <$tmpdir/filtered
>$tmpdir/filelist_all
108 grep -E '(complete_formatting|copyright)$' <$tmpdir/filtered | \
109 cut
-f2 >$tmpdir/filelist_copyright
110 git diff-files
--name-only |
grep -Ff $tmpdir/filelist_all
>$tmpdir/localmods
112 # Extract changed files to a temporary directory
114 if [[ $action == *-index ]] ; then
115 git checkout-index
--prefix=$tmpdir/org
/ --stdin <$tmpdir/filelist_all
117 rsync
--files-from=$tmpdir/filelist_all
$srcdir $tmpdir/org
119 # Duplicate the original files to a separate directory, where all changes will
121 cp -r $tmpdir/org
$tmpdir/new
123 # Create output file for what was done (in case no messages get written)
124 touch $tmpdir/messages
126 # Run uncrustify on the temporary directory
129 # Update the copyright headers using the requested mode
130 if [[ $copyright_mode != "off" ]] ; then
131 cpscript_args
="--update-year"
132 case "$copyright_mode" in
136 cpscript_args
+=" --add-missing"
139 cpscript_args
+=" --add-missing --update-header"
142 cpscript_args
+=" --replace-header"
145 cpscript_args
+=" --add-missing --update-header --replace-header"
148 echo "Unknown copyright mode: $copyright_mode"
151 if [[ $action == check-
* ]] ; then
152 cpscript_args
+=" --check"
154 # TODO: Probably better to invoke python explicitly through a customizable
156 if ! $admin_dir/copyright.py
-F $tmpdir/filelist_copyright
$cpscript_args >>$tmpdir/messages
158 echo "Copyright checking failed!"
166 # If a diff was requested, show it and we are done
167 if [[ $action == diff-
* ]] ; then
168 git
diff --no-index --no-prefix "${diffargs[@]}" org
/ new
/
173 # Find the changed files
174 git
diff --no-index --name-only --exit-code org
/ new
/ | \
175 sed -e 's#new/##' > $tmpdir/changed
177 if [[ -s $tmpdir/changed
]]
182 # Check if changed files have changed outside the index
183 if grep -Ff $tmpdir/localmods
$tmpdir/changed
> $tmpdir/conflicts
185 awk '{print $0 ": has changes in work tree"}' $tmpdir/conflicts \
187 if [[ ! $force && $action == update-
* ]] ; then
188 echo "Modified files found in work tree, skipping update. Use -f to override."
189 echo "The following would have been done:"
190 sort $tmpdir/messages
196 # Update the index/work tree if requested
197 if [[ $action == update-index
]] ; then
198 grep -Ff $tmpdir/changed
$tmpdir/filtered
> $tmpdir/tohash
202 for change
in `cut -f2 $tmpdir/tohash | \
203 git --git-dir=$srcdir/.git hash-object -w --stdin-paths --no-filters | \
204 paste - $tmpdir/tohash`
206 # NOTE: the patterns below contain literal tabs
212 # Contains a literal tab
213 echo "$mode $sha1 $path" >> $tmpdir/toindex
216 git
--git-dir=$srcdir/.git update-index
--index-info < $tmpdir/toindex
217 elif [[ $action == update-workdir
]] ; then
218 rsync
--files-from=$tmpdir/changed
$tmpdir/new
/ $srcdir/
221 # Get back to the original directory
224 # Report what was done
225 sort $tmpdir/messages |
tee $warning_file