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   1 <title>tpa file format</title>
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   4 <h2>tpa file format</h2>
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   6 <TR>
   7 <TD><font size=-1><A HREF="../online.html">Main Table of Contents</A></font></TD>
   8 <TD ALIGN=RIGHT><B>VERSION 4.0</B></TR>
   9 <TR><TD><font size=-1><A HREF="http://www.gromacs.org">GROMACS homepage</A></font></TD>
  10 <TD ALIGN=RIGHT><B>Sun 18 Jan 2009</B></TR></TABLE></CENTER><HR>
  11 <H3>Description</H3>
  12 The tpa file extension stands for binary run input file. This file contains
  13 the starting structure of your simulation, The molecular topology and
  14 all the simulation data. Because this file is in binary format it
  15 cannot be read with a normal editor. To read a binary run input file type:
  16 <PRE>
  17 % <a href="gmxdump.html">gmxdump</a> -s topol.tpa
  18 </PRE>
  19 or if you're not such a fast reader:
  20 <PRE>
  21 % gmxdump -s topol.tpa | more
  22 </PRE>
  23
  24 <p>
  25 You can also compare two tpa files using:
  26 <pre>
  27 % <a href="gmxcheck.html">gmxcheck</a> -s1 top1 -s2 top2 | more
  28 </pre>
  29 <CENTER><TABLE BORDER=0 CELLSPACING=0 CELLPADDING=0 COLS=2 WIDTH="98%">
  30 <TR>
  31 <TD><font size=-1><A HREF="../online.html">Main Table of Contents</A></font></TD>
  32 <TD ALIGN=RIGHT><B>VERSION 4.0</B></TR>
  33 <TR><TD><font size=-1><A HREF="http://www.gromacs.org">GROMACS homepage</A></font></TD>
  34 <TD ALIGN=RIGHT><B>Sun 18 Jan 2009</B></TR></TABLE></CENTER><HR>
  35 </body>