include/gmx_ana.h

   1 /*
   2  *
   3  *                This source code is part of
   4  *
   5  *                 G   R   O   M   A   C   S
   6  *
   7  *          GROningen MAchine for Chemical Simulations
   8  *
   9  * Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
  10  * Copyright (c) 1991-2000, University of Groningen, The Netherlands.
  11  * Copyright (c) 2001-2008, The GROMACS development team,
  12  * check out http://www.gromacs.org for more information.
  13
  14  * This program is free software; you can redistribute it and/or
  15  * modify it under the terms of the GNU General Public License
  16  * as published by the Free Software Foundation; either version 2
  17  * of the License, or (at your option) any later version.
  18  *
  19  * If you want to redistribute modifications, please consider that
  20  * scientific software is very special. Version control is crucial -
  21  * bugs must be traceable. We will be happy to consider code for
  22  * inclusion in the official distribution, but derived work must not
  23  * be called official GROMACS. Details are found in the README & COPYING
  24  * files - if they are missing, get the official version at www.gromacs.org.
  25  *
  26  * To help us fund GROMACS development, we humbly ask that you cite
  27  * the papers on the package - you can find them in the top README file.
  28  *
  29  * For more info, check our website at http://www.gromacs.org
  30  *
  31  * And Hey:
  32  * Gallium Rubidium Oxygen Manganese Argon Carbon Silicon
  33  */
  34
  35 #ifndef _gmx_ana_h
  36 #define _gmx_ana_h
  37
  38 #ifdef __cplusplus
  39 extern "C" {
  40 #endif
  41
  42 int
  43 gmx_analyze(int argc,char *argv[]);
  44
  45 int
  46 gmx_anaeig(int argc,char *argv[]);
  47
  48 int
  49 gmx_g_angle(int argc,char *argv[]);
  50
  51 int
  52 gmx_bar(int argc,char *argv[]);
  53
  54 int
  55 gmx_bond(int argc,char *argv[]);
  56
  57 int
  58 gmx_bundle(int argc,char *argv[]);
  59
  60 int
  61 gmx_chi(int argc,char *argv[]);
  62
  63 int
  64 gmx_cluster(int argc,char *argv[]);
  65
  66 int
  67 gmx_confrms(int argc,char *argv[]);
  68
  69 int
  70 gmx_covar(int argc,char *argv[]);
  71
  72 int
  73 gmx_current(int argc,char *argv[]);
  74
  75 int
  76 gmx_density(int argc,char *argv[]);
  77
  78 int
  79 gmx_densmap(int argc,char *argv[]);
  80
  81 int
  82 gmx_densorder(int argc,char *argv[]);
  83
  84 int
  85 gmx_dielectric(int argc,char *argv[]);
  86
  87 int
  88 gmx_dih(int argc,char *argv[]);
  89
  90 int
  91 gmx_dipoles(int argc,char *argv[]);
  92
  93 int
  94 gmx_disre(int argc,char *argv[]);
  95
  96 int
  97 gmx_dist(int argc,char *argv[]);
  98
  99 int
 100 gmx_dos(int argc,char *argv[]);
 101
 102 int
 103 gmx_dyecoupl(int argc,char *argv[]);
 104
 105 int
 106 gmx_dyndom(int argc,char *argv[]);
 107
 108 int
 109 gmx_editconf(int argc, char *argv[]);
 110
 111 int
 112 gmx_eneconv(int argc,char *argv[]);
 113
 114 int
 115 gmx_enemat(int argc,char *argv[]);
 116
 117 int
 118 gmx_energy(int argc,char *argv[]);
 119
 120 int
 121 gmx_lie(int argc,char *argv[]);
 122
 123 int
 124 gmx_filter(int argc,char *argv[]);
 125
 126 int
 127 gmx_genbox(int argc,char *argv[]);
 128
 129 int
 130 gmx_genconf(int argc,char *argv[]);
 131
 132 int
 133 gmx_genion(int argc,char *argv[]);
 134
 135 int
 136 gmx_genpr(int argc,char *argv[]);
 137
 138 int
 139 gmx_gyrate(int argc,char *argv[]);
 140
 141 int
 142 gmx_h2order(int argc,char *argv[]);
 143
 144 int
 145 gmx_hbond(int argc,char *argv[]);
 146
 147 int
 148 gmx_helix(int argc,char *argv[]);
 149
 150 int
 151 gmx_helixorient(int argc,char *argv[]);
 152
 153 int
 154 gmx_hydorder(int argc,char *argv[]);
 155
 156 int
 157 gmx_kinetics(int argc,char *argv[]);
 158
 159 int
 160 gmx_mindist(int argc,char *argv[]);
 161
 162 int
 163 gmx_msd(int argc,char *argv[]);
 164
 165 int
 166 gmx_morph(int argc,char *argv[]);
 167
 168 int
 169 gmx_nmeig(int argc,char *argv[]);
 170
 171 int
 172 gmx_nmens(int argc,char *argv[]);
 173
 174 int
 175 gmx_nmtraj(int argc,char *argv[]);
 176
 177 int
 178 gmx_order(int argc,char *argv[]);
 179
 180 int
 181 gmx_polystat(int argc,char *argv[]);
 182
 183 int
 184 gmx_potential(int argc,char *argv[]);
 185
 186 int
 187 gmx_principal(int argc,char *argv[]);
 188
 189 int
 190 gmx_rama(int argc,char *argv[]);
 191
 192 int
 193 gmx_rdf(int argc,char *argv[]);
 194
 195 int
 196 gmx_rotmat(int argc,char *argv[]);
 197
 198 int
 199 gmx_rms(int argc,char *argv[]);
 200
 201 int
 202 gmx_rmsdist(int argc,char *argv[]);
 203
 204 int
 205 gmx_rmsf(int argc,char *argv[]);
 206
 207 int
 208 gmx_rotacf(int argc,char *argv[]);
 209
 210 int
 211 gmx_saltbr(int argc,char *argv[]);
 212
 213 int
 214 gmx_sas(int argc,char *argv[]);
 215
 216 int
 217 gmx_sdf(int argc,char *argv[]);
 218
 219 int
 220 gmx_select(int argc,char *argv[]);
 221
 222 int
 223 gmx_sgangle(int argc,char *argv[]);
 224
 225 int
 226 gmx_sham(int argc,char *argv[]);
 227
 228 int
 229 gmx_sorient(int argc,char *argv[]);
 230
 231 int
 232 gmx_spol(int argc,char *argv[]);
 233
 234 int
 235 gmx_spatial(int argc,char *argv[]);
 236
 237 int
 238 gmx_tcaf(int argc,char *argv[]);
 239
 240 int
 241 gmx_traj(int argc,char *argv[]);
 242
 243 int
 244 gmx_trjcat(int argc,char *argv[]);
 245
 246 int
 247 gmx_trjconv(int argc,char *argv[]);
 248
 249 int
 250 gmx_trjorder(int argc,char *argv[]);
 251
 252 int
 253 gmx_tune_pme(int argc,char *argv[]);
 254
 255 int
 256 gmx_velacc(int argc,char *argv[]);
 257
 258 int
 259 gmx_clustsize(int argc,char *argv[]);
 260
 261 int
 262 gmx_mdmat(int argc,char *argv[]);
 263
 264 int
 265 gmx_vanhove(int argc,char *argv[]);
 266
 267 int
 268 gmx_wham(int argc,char *argv[]);
 269
 270 int
 271 gmx_wheel(int argc,char *argv[]);
 272
 273 int
 274 gmx_xpm2ps(int argc,char *argv[]);
 275
 276 int
 277 gmx_membed(int argc,char *argv[]);
 278
 279 int
 280 gmx_pme_error(int argc,char *argv[]);
 281
 282 int
 283 gmx_options(int argc,char *argv[]);
 284
 285 int
 286 gmx_sans(int argc,char *argv[]);
 287
 288 #ifdef __cplusplus
 289 }
 290 #endif
 291
 292 #endif
 293 /* _gmx_ana_h */