include/gmxfio.h

   1 /*
   2  *
   3  *                This source code is part of
   4  *
   5  *                 G   R   O   M   A   C   S
   6  *
   7  *          GROningen MAchine for Chemical Simulations
   8  *
   9  *                        VERSION 3.2.0
  10  * Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
  11  * Copyright (c) 1991-2000, University of Groningen, The Netherlands.
  12  * Copyright (c) 2001-2004, The GROMACS development team,
  13  * check out http://www.gromacs.org for more information.
  14
  15  * This program is free software; you can redistribute it and/or
  16  * modify it under the terms of the GNU General Public License
  17  * as published by the Free Software Foundation; either version 2
  18  * of the License, or (at your option) any later version.
  19  *
  20  * If you want to redistribute modifications, please consider that
  21  * scientific software is very special. Version control is crucial -
  22  * bugs must be traceable. We will be happy to consider code for
  23  * inclusion in the official distribution, but derived work must not
  24  * be called official GROMACS. Details are found in the README & COPYING
  25  * files - if they are missing, get the official version at www.gromacs.org.
  26  *
  27  * To help us fund GROMACS development, we humbly ask that you cite
  28  * the papers on the package - you can find them in the top README file.
  29  *
  30  * For more info, check our website at http://www.gromacs.org
  31  *
  32  * And Hey:
  33  * Gromacs Runs On Most of All Computer Systems
  34  */
  35
  36 #ifndef _gmxfio_h
  37 #define _gmxfio_h
  38
  39 #ifdef HAVE_CONFIG_H
  40 #include <config.h>
  41 #endif
  42
  43 #include <stdio.h>
  44 #include "sysstuff.h"
  45 #include "typedefs.h"
  46 #include "xdrf.h"
  47 #include "futil.h"
  48
  49 /* types */
  50
  51
  52 /* Enumerated for different items in files */
  53 enum { eitemHEADER, eitemIR, eitemBOX,
  54        eitemTOP, eitemX, eitemV, eitemF, eitemNR };
  55
  56 /* Enumerated for data types in files */
  57 enum { eioREAL, eioFLOAT, eioDOUBLE, eioINT, eioGMX_LARGE_INT,
  58        eioUCHAR, eioNUCHAR, eioUSHORT,
  59        eioRVEC, eioNRVEC, eioIVEC, eioSTRING, eioNR };
  60
  61 typedef struct t_fileio t_fileio;
  62
  63 extern const char *itemstr[eitemNR];
  64 extern const char *comment_str[eitemNR];
  65
  66
  67 /********************************************************
  68  * Open and Close
  69  ********************************************************/
  70
  71 t_fileio *gmx_fio_open(const char *fn,const char *mode);
  72 /* Open a new file for reading or writing.
  73  * The file type will be deduced from the file name.
  74  * If fn is NULL, stdin / stdout will be used for Ascii I/O (TPA type)
  75  * mode may be "r", "w", or "a". You should append a "b" to the mode
  76  * if you are writing a binary file, but the routine will also
  77  * doublecheck it and try to do it if you forgot. This has no effect on
  78  * unix, but is important on windows.
  79  */
  80
  81 int gmx_fio_close(t_fileio *fp);
  82 /* Close the file corresponding to fp (if not stdio)
  83  * The routine will exit when an invalid fio is handled.
  84  * Returns 0 on success.
  85  */
  86
  87 int gmx_fio_fp_close(t_fileio *fp);
  88 /* Close the file corresponding to fp without closing the FIO entry
  89  * Needed e.g. for trxio because the FIO entries are used to store
  90  * additional data.
  91  * NOTE that the fp still needs to be properly closed with gmx_fio_close().
  92  * The routine will exit when an invalid fio is handled.
  93  * Returns 0 on success.
  94  */
  95
  96
  97 /* Open a file, return a stream, record the entry in internal FIO object */
  98 FILE* gmx_fio_fopen(const char *fn,const char *mode);
  99
 100 /* Close a file previously opened with gmx_fio_fopen.
 101  * Do not mix these calls with standard fopen/fclose ones!
 102  * Returns 0 on success.  */
 103 int gmx_fio_fclose(FILE *fp);
 104
 105
 106
 107 /********************************************************
 108  * Change properties of the open file
 109  ********************************************************/
 110
 111 extern void gmx_fio_setprecision(t_fileio *fio,bool bDouble);
 112 /* Select the floating point precision for reading and writing files */
 113
 114 extern char *gmx_fio_getname(t_fileio *fio);
 115 /* Return the filename corresponding to the fio index */
 116
 117 extern int gmx_fio_getftp(t_fileio *fio);
 118 /* Return the filetype corresponding to the fio index.
 119     There is as of now no corresponding setftp function because the file
 120     was opened as a specific file type and changing that midway is most
 121     likely an evil hack. */
 122
 123 extern void gmx_fio_setdebug(t_fileio *fio,bool bDebug);
 124 /* Set the debug mode */
 125
 126 extern bool gmx_fio_getdebug(t_fileio *fio);
 127 /* Return  whether debug mode is on in fio  */
 128
 129 extern bool gmx_fio_getread(t_fileio *fio);
 130 /* Return  whether read mode is on in fio  */
 131
 132
 133 extern void gmx_fio_checktype(t_fileio *fio);
 134 /* Check whether the fio is of a sane type */
 135
 136 /***************************************************
 137  * FILE Operations
 138  ***************************************************/
 139
 140 extern void gmx_fio_rewind(t_fileio *fio);
 141 /* Rewind the tpa file in fio */
 142
 143 int gmx_fio_flush(t_fileio *fio);
 144 /* Flush the fio, returns 0 on success */
 145
 146 int gmx_fio_fsync(t_fileio *fio);
 147 /* fsync the fio, returns 0 on success.
 148    NOTE: don't use fsync function unless you're absolutely sure you need it
 149    because it deliberately interferes with the OS's caching mechanisms and
 150    can cause dramatically slowed down IO performance. Some OSes (Linux,
 151    for example), may implement fsync as a full sync() point. */
 152
 153 extern gmx_off_t gmx_fio_ftell(t_fileio *fio);
 154 /* Return file position if possible */
 155
 156 extern int gmx_fio_seek(t_fileio *fio,gmx_off_t fpos);
 157 /* Set file position if possible, quit otherwise */
 158
 159 extern FILE *gmx_fio_getfp(t_fileio *fio);
 160 /* Return the file pointer itself */
 161
 162 extern XDR *gmx_fio_getxdr(t_fileio *fio);
 163 /* Return the file pointer itself */
 164
 165
 166
 167
 168
 169 /* Element with information about position in a currently open file.
 170  * gmx_off_t should be defined by autoconf if your system does not have it.
 171  * If you do not have it on some other platform you do not have largefile
 172  * support at all, and you can define it to int (or better, find out how to
 173  * enable large files).  */
 174 typedef struct
 175 {
 176         char      filename[STRLEN];
 177         gmx_off_t offset;
 178         unsigned char chksum[16];
 179         int       chksum_size;
 180 }
 181 gmx_file_position_t;
 182
 183
 184 int gmx_fio_check_file_position(t_fileio *fio);
 185 /* Check if the file position is out of the range of off_t.
 186  * The result is stored along with the other file data of fio.
 187  */
 188
 189 int gmx_fio_get_output_file_positions(gmx_file_position_t ** outputfiles,
 190                                       int *nfiles );
 191 /* Return the name and file pointer positions for all currently open
 192  * output files. This is used for saving in the checkpoint files, so we
 193  * can truncate output files upon restart-with-appending.
 194  *
 195  * For the first argument you should use a pointer, which will be set to
 196  * point to a list of open files.
 197  */
 198
 199 t_fileio *gmx_fio_all_output_fsync(void);
 200 /* fsync all open output files. This is used for checkpointing, where
 201    we need to ensure that all output is actually written out to
 202    disk.
 203    This is most important in the case of some networked file systems,
 204    where data is not synced with the file server until close() or
 205    fsync(), so data could remain in cache for days.
 206    Note the caveats reported with gmx_fio_fsync().
 207
 208     returns: NULL if no error occurred, or a pointer to the first file that
 209              failed if an error occurred
 210 */
 211
 212
 213 int gmx_fio_get_file_md5(t_fileio *fio, gmx_off_t offset,
 214                          unsigned char digest[]);
 215
 216
 217 extern int xtc_seek_frame(t_fileio *fio, int frame, int natoms);
 218
 219 extern int xtc_seek_time(t_fileio *fio, real time, int natoms);
 220
 221
 222 /* Add this to the comment string for debugging */
 223 extern void gmx_fio_set_comment(t_fileio *fio, const char *comment);
 224
 225 /* Remove previously set comment */
 226 extern void gmx_fio_unset_comment(t_fileio *fio);
 227
 228
 229
 230
 231 /********************************************************
 232  * Read and write
 233  ********************************************************/
 234
 235
 236 /* basic reading & writing */
 237 bool gmx_fio_reade_real(t_fileio *fio, real *item,
 238                         const char *desc, const char *srcfile, int line);
 239 bool gmx_fio_reade_float(t_fileio *fio, float *item,
 240                           const char *desc, const char *srcfile, int line);
 241 bool gmx_fio_reade_double(t_fileio *fio, double *item,
 242                           const char *desc, const char *srcfile, int line);
 243 bool gmx_fio_reade_int(t_fileio *fio, int *item,
 244                        const char *desc, const char *srcfile, int line);
 245 bool gmx_fio_reade_gmx_large_int(t_fileio *fio, gmx_large_int_t *item,
 246                                  const char *desc, const char *srcfile, int line);
 247 bool gmx_fio_reade_uchar(t_fileio *fio, unsigned char *item,
 248                          const char *desc, const char *srcfile, int line);
 249 bool gmx_fio_reade_ushort(t_fileio *fio, unsigned short *item,
 250                          const char *desc, const char *srcfile, int line);
 251 bool gmx_fio_reade_rvec(t_fileio *fio, rvec *item,
 252                         const char *desc, const char *srcfile, int line);
 253 bool gmx_fio_reade_ivec(t_fileio *fio, ivec *item,
 254                         const char *desc, const char *srcfile, int line);
 255 bool gmx_fio_reade_string(t_fileio *fio, char *item,
 256                           const char *desc, const char *srcfile, int line);
 257
 258 bool gmx_fio_writee_real(t_fileio *fio, real item,
 259                          const char *desc, const char *srcfile, int line);
 260 bool gmx_fio_writee_float(t_fileio *fio, float item,
 261                            const char *desc, const char *srcfile, int line);
 262 bool gmx_fio_writee_double(t_fileio *fio, double item,
 263                            const char *desc, const char *srcfile, int line);
 264 bool gmx_fio_writee_int(t_fileio *fio, int item,
 265                         const char *desc, const char *srcfile, int line);
 266 bool gmx_fio_writee_gmx_large_int(t_fileio *fio, gmx_large_int_t item,
 267                                   const char *desc, const char *srcfile, int line);
 268 bool gmx_fio_writee_uchar(t_fileio *fio, unsigned char item,
 269                           const char *desc, const char *srcfile, int line);
 270 bool gmx_fio_writee_ushort(t_fileio *fio, unsigned short item,
 271                           const char *desc, const char *srcfile, int line);
 272 bool gmx_fio_writee_rvec(t_fileio *fio, rvec *item,
 273                          const char *desc, const char *srcfile, int line);
 274 bool gmx_fio_writee_ivec(t_fileio *fio, ivec *item,
 275                          const char *desc, const char *srcfile, int line);
 276 bool gmx_fio_writee_string(t_fileio *fio, const char *item,
 277                            const char *desc, const char *srcfile, int line);
 278
 279 /* reading or writing, depending on the file's opening mode string */
 280 bool gmx_fio_doe_real(t_fileio *fio, real *item,
 281                       const char *desc, const char *srcfile, int line);
 282 bool gmx_fio_doe_float(t_fileio *fio, float *item,
 283                        const char *desc, const char *srcfile, int line);
 284 bool gmx_fio_doe_double(t_fileio *fio, double *item,
 285                         const char *desc, const char *srcfile, int line);
 286 bool gmx_fio_doe_bool(t_fileio *fio, bool *item,
 287                      const char *desc, const char *srcfile, int line);
 288 bool gmx_fio_doe_int(t_fileio *fio, int *item,
 289                      const char *desc, const char *srcfile, int line);
 290 bool gmx_fio_doe_gmx_large_int(t_fileio *fio, gmx_large_int_t *item,
 291                                const char *desc, const char *srcfile, int line);
 292 bool gmx_fio_doe_uchar(t_fileio *fio, unsigned char *item,
 293                        const char *desc, const char *srcfile, int line);
 294 bool gmx_fio_doe_ushort(t_fileio *fio, unsigned short *item,
 295                        const char *desc, const char *srcfile, int line);
 296 bool gmx_fio_doe_rvec(t_fileio *fio, rvec *item,
 297                       const char *desc, const char *srcfile, int line);
 298 bool gmx_fio_doe_ivec(t_fileio *fio, ivec *item,
 299                       const char *desc, const char *srcfile, int line);
 300 bool gmx_fio_doe_string(t_fileio *fio, char *item,
 301                         const char *desc, const char *srcfile, int line);
 302
 303
 304
 305
 306 /* array reading & writing */
 307 bool gmx_fio_nreade_real(t_fileio *fio, real *item, int n,
 308                          const char *desc, const char *srcfile, int line);
 309 bool gmx_fio_nreade_float(t_fileio *fio, float *item, int n,
 310                           const char *desc, const char *srcfile, int line);
 311 bool gmx_fio_nreade_double(t_fileio *fio, double *item, int n,
 312                            const char *desc, const char *srcfile, int line);
 313 bool gmx_fio_nreade_int(t_fileio *fio, int *item, int n,
 314                         const char *desc, const char *srcfile, int line);
 315 bool gmx_fio_nreade_gmx_large_int(t_fileio *fio, gmx_large_int_t *item, int n,
 316                                   const char *desc, const char *srcfile,
 317                                   int line);
 318 bool gmx_fio_nreade_uchar(t_fileio *fio, unsigned char *item, int n,
 319                           const char *desc, const char *srcfile, int line);
 320 bool gmx_fio_nreade_ushort(t_fileio *fio, unsigned short *item, int n,
 321                           const char *desc, const char *srcfile, int line);
 322 bool gmx_fio_nreade_rvec(t_fileio *fio, rvec *item, int n,
 323                          const char *desc, const char *srcfile, int line);
 324 bool gmx_fio_nreade_ivec(t_fileio *fio, ivec *item, int n,
 325                          const char *desc, const char *srcfile, int line);
 326 bool gmx_fio_nreade_string(t_fileio *fio, char *item[], int n,
 327                            const char *desc, const char *srcfile, int line);
 328
 329 bool gmx_fio_nwritee_real(t_fileio *fio, const real *item, int n,
 330                           const char *desc, const char *srcfile, int line);
 331 bool gmx_fio_nwritee_float(t_fileio *fio, const float *item, int n,
 332                            const char *desc, const char *srcfile, int line);
 333 bool gmx_fio_nwritee_double(t_fileio *fio, const double *item, int n,
 334                             const char *desc, const char *srcfile, int line);
 335 bool gmx_fio_nwritee_int(t_fileio *fio, const int *item, int n,
 336                          const char *desc, const char *srcfile, int line);
 337 bool gmx_fio_nwritee_gmx_large_int(t_fileio *fio,
 338                                    const gmx_large_int_t *item, int n,
 339                                    const char *desc, const char *srcfile,
 340                                    int line);
 341 bool gmx_fio_nwritee_uchar(t_fileio *fio, const unsigned char *item, int n,
 342                            const char *desc, const char *srcfile, int line);
 343 bool gmx_fio_nwritee_ushort(t_fileio *fio, const unsigned short *item, int n,
 344                            const char *desc, const char *srcfile, int line);
 345 bool gmx_fio_nwritee_rvec(t_fileio *fio, const rvec *item, int n,
 346                           const char *desc, const char *srcfile, int line);
 347 bool gmx_fio_nwritee_ivec(t_fileio *fio, const ivec *item, int n,
 348                           const char *desc, const char *srcfile, int line);
 349 bool gmx_fio_nwritee_string(t_fileio *fio, const char *item[], int n,
 350                             const char *desc, const char *srcfile, int line);
 351
 352 bool gmx_fio_ndoe_real(t_fileio *fio, real *item, int n,
 353                        const char *desc, const char *srcfile, int line);
 354 bool gmx_fio_ndoe_float(t_fileio *fio, float *item, int n,
 355                          const char *desc, const char *srcfile, int line);
 356 bool gmx_fio_ndoe_double(t_fileio *fio, double *item, int n,
 357                          const char *desc, const char *srcfile, int line);
 358 bool gmx_fio_ndoe_bool(t_fileio *fio, bool *item, int n,
 359                       const char *desc, const char *srcfile, int line);
 360 bool gmx_fio_ndoe_int(t_fileio *fio, int *item, int n,
 361                       const char *desc, const char *srcfile, int line);
 362 bool gmx_fio_ndoe_gmx_large_int(t_fileio *fio, gmx_large_int_t *item, int n,
 363                                 const char *desc, const char *srcfile,
 364                                 int line);
 365 bool gmx_fio_ndoe_uchar(t_fileio *fio, unsigned char *item, int n,
 366                         const char *desc, const char *srcfile, int line);
 367 bool gmx_fio_ndoe_ushort(t_fileio *fio, unsigned short *item, int n,
 368                         const char *desc, const char *srcfile, int line);
 369 bool gmx_fio_ndoe_rvec(t_fileio *fio, rvec *item, int n,
 370                        const char *desc, const char *srcfile, int line);
 371 bool gmx_fio_ndoe_ivec(t_fileio *fio, ivec *item, int n,
 372                        const char *desc, const char *srcfile, int line);
 373 bool gmx_fio_ndoe_string(t_fileio *fio, char *item[], int n,
 374                          const char *desc, const char *srcfile, int line);
 375
 376
 377
 378 /* convenience macros */
 379 #define gmx_fio_read_real(fio, item)           gmx_fio_reade_real(fio, &item, (#item), __FILE__, __LINE__)
 380 #define gmx_fio_read_float(fio, item)          gmx_fio_reade_float(fio, &item, (#item), __FILE__, __LINE__)
 381 #define gmx_fio_read_double(fio, item)         gmx_fio_reade_double(fio, &item, (#item), __FILE__, __LINE__)
 382 #define gmx_fio_read_int(fio, item)            gmx_fio_reade_int(fio, &item, (#item), __FILE__, __LINE__)
 383 #define gmx_fio_read_gmx_large_int(fio, item)  gmx_fio_reade_gmx_large_int(fio, &item, (#item), __FILE__, __LINE__)
 384 #define gmx_fio_read_uchar(fio, item)          gmx_fio_reade_uchar(fio, &item, (#item), __FILE__, __LINE__)
 385 #define gmx_fio_read_ushort(fio, item)         gmx_fio_reade_ushort(fio, &item, (#item), __FILE__, __LINE__)
 386 #define gmx_fio_read_rvec(fio, item)           gmx_fio_reade_rvec(fio, item, (#item), __FILE__, __LINE__)
 387 #define gmx_fio_read_ivec(fio, item)           gmx_fio_reade_ivec(fio, item, (#item), __FILE__, __LINE__)
 388 #define gmx_fio_read_string(fio, item)         gmx_fio_reade_string(fio, item, (#item), __FILE__, __LINE__)
 389
 390 #define gmx_fio_write_real(fio, item)           gmx_fio_writee_real(fio, item, (#item), __FILE__, __LINE__)
 391 #define gmx_fio_write_float(fio, item)          gmx_fio_writee_float(fio, item, (#item), __FILE__, __LINE__)
 392 #define gmx_fio_write_double(fio, item)         gmx_fio_writee_double(fio, item, (#item), __FILE__, __LINE__)
 393 #define gmx_fio_write_int(fio, item)            gmx_fio_writee_int(fio, item, (#item), __FILE__, __LINE__)
 394 #define gmx_fio_write_gmx_large_int(fio, item)  gmx_fio_writee_gmx_large_int(fio, item, (#item), __FILE__, __LINE__)
 395 #define gmx_fio_write_uchar(fio, item)          gmx_fio_writee_uchar(fio, item, (#item), __FILE__, __LINE__)
 396 #define gmx_fio_write_ushort(fio, item)         gmx_fio_writee_ushort(fio, item, (#item), __FILE__, __LINE__)
 397 #define gmx_fio_write_rvec(fio, item)           gmx_fio_writee_rvec(fio, item, (#item), __FILE__, __LINE__)
 398 #define gmx_fio_write_ivec(fio, item)           gmx_fio_writee_ivec(fio, item, (#item), __FILE__, __LINE__)
 399 #define gmx_fio_write_string(fio, item)         gmx_fio_writee_string(fio, item, (#item), __FILE__, __LINE__)
 400
 401 #define gmx_fio_do_real(fio, item)              gmx_fio_doe_real(fio, &item, (#item), __FILE__, __LINE__)
 402 #define gmx_fio_do_float(fio, item)             gmx_fio_doe_float(fio, &item, (#item), __FILE__, __LINE__)
 403 #define gmx_fio_do_double(fio, item)            gmx_fio_doe_double(fio, &item, (#item), __FILE__, __LINE__)
 404 #define gmx_fio_do_bool(fio, item)              gmx_fio_doe_bool(fio, &item, (#item), __FILE__, __LINE__)
 405 #define gmx_fio_do_int(fio, item)               gmx_fio_doe_int(fio, &item, (#item), __FILE__, __LINE__)
 406 #define gmx_fio_do_gmx_large_int(fio, item)     gmx_fio_doe_gmx_large_int(fio, &item, (#item), __FILE__, __LINE__)
 407 #define gmx_fio_do_uchar(fio, item)             gmx_fio_doe_uchar(fio, &item, (#item), __FILE__, __LINE__)
 408 #define gmx_fio_do_ushort(fio, item)            gmx_fio_doe_ushort(fio, &item, (#item), __FILE__, __LINE__)
 409 #define gmx_fio_do_rvec(fio, item)              gmx_fio_doe_rvec(fio, &item, (#item), __FILE__, __LINE__)
 410 #define gmx_fio_do_ivec(fio, item)              gmx_fio_doe_ivec(fio, &item, (#item), __FILE__, __LINE__)
 411 #define gmx_fio_do_string(fio, item)            gmx_fio_doe_string(fio, item, (#item), __FILE__, __LINE__)
 412
 413
 414
 415
 416 #define gmx_fio_nread_real(fio, item, n)            gmx_fio_nreade_real(fio, item, n, (#item), __FILE__, __LINE__)
 417 #define gmx_fio_nread_float(fio, item, n)           gmx_fio_nreade_float(fio, item, n, (#item), __FILE__, __LINE__)
 418 #define gmx_fio_nread_double(fio, item, n)          gmx_fio_nreade_double(fio, item, n, (#item), __FILE__, __LINE__)
 419 #define gmx_fio_nread_int(fio, item, n)             gmx_fio_nreade_int(fio, item, n, (#item), __FILE__, __LINE__)
 420 #define gmx_fio_nread_gmx_large_int(fio, item, n)   gmx_fio_nreade_gmx_large_int(fio, item, n, (#item), __FILE__, __LINE__)
 421 #define gmx_fio_nread_uchar(fio, item, n)           gmx_fio_nreade_uchar(fio, item, n, (#item), __FILE__, __LINE__)
 422 #define gmx_fio_nread_ushort(fio, item, n)          gmx_fio_nreade_ushort(fio, item, n, (#item), __FILE__, __LINE__)
 423 #define gmx_fio_nread_rvec(fio, item, n)            gmx_fio_nreade_rvec(fio, item, n, (#item), __FILE__, __LINE__)
 424 #define gmx_fio_nread_ivec(fio, item, n)            gmx_fio_nreade_ivec(fio, item, n, (#item), __FILE__, __LINE__)
 425 #define gmx_fio_nread_string(fio, item, n)          gmx_fio_nreade_string(fio, item, n, (#item), __FILE__, __LINE__)
 426
 427 #define gmx_fio_nwrite_real(fio, item, n)           gmx_fio_nwritee_real(fio, item, n, (#item), __FILE__, __LINE__)
 428 #define gmx_fio_nwrite_float(fio, item, n)          gmx_fio_nwritee_float(fio, item, n, (#item), __FILE__, __LINE__)
 429 #define gmx_fio_nwrite_double(fio, item, n)         gmx_fio_nwritee_double(fio, item, n, (#item), __FILE__, __LINE__)
 430 #define gmx_fio_nwrite_int(fio, item, n)            gmx_fio_nwritee_int(fio, item, n, (#item), __FILE__, __LINE__)
 431 #define gmx_fio_nwrite_gmx_large_int(fio, item, n)  gmx_fio_nwritee_gmx_large_int(fio, item, n, (#item), __FILE__, __LINE__)
 432 #define gmx_fio_nwrite_uchar(fio, item, n)          gmx_fio_nwritee_uchar(fio, item, n, (#item), __FILE__, __LINE__)
 433 #define gmx_fio_nwrite_ushort(fio, item, n)         gmx_fio_nwritee_ushort(fio, item, n, (#item), __FILE__, __LINE__)
 434 #define gmx_fio_nwrite_rvec(fio, item, n)           gmx_fio_nwritee_rvec(fio, item, n, (#item), __FILE__, __LINE__)
 435 #define gmx_fio_nwrite_ivec(fio, item, n)           gmx_fio_nwritee_ivec(fio, item, n, (#item), __FILE__, __LINE__)
 436 #define gmx_fio_nwrite_string(fio, item, n)         gmx_fio_nwritee_string(fio, item, n, (#item), __FILE__, __LINE__)
 437
 438 #define gmx_fio_ndo_real(fio, item, n)              gmx_fio_ndoe_real(fio, item, n, (#item), __FILE__, __LINE__)
 439 #define gmx_fio_ndo_float(fio, item, n)             gmx_fio_ndoe_float(fio, item, n, (#item), __FILE__, __LINE__)
 440 #define gmx_fio_ndo_double(fio, item, n)            gmx_fio_ndoe_double(fio, item, n, (#item), __FILE__, __LINE__)
 441 #define gmx_fio_ndo_bool(fio, item, n)              gmx_fio_ndoe_bool(fio, item, n, (#item), __FILE__, __LINE__)
 442 #define gmx_fio_ndo_int(fio, item, n)               gmx_fio_ndoe_int(fio, item, n, (#item), __FILE__, __LINE__)
 443 #define gmx_fio_ndo_gmx_large_int(fio, item, n)     gmx_fio_ndoe_gmx_large_int(fio, item, n, (#item), __FILE__, __LINE__)
 444 #define gmx_fio_ndo_uchar(fio, item, n)             gmx_fio_ndoe_uchar(fio, item, n, (#item), __FILE__, __LINE__)
 445 #define gmx_fio_ndo_ushort(fio, item, n)            gmx_fio_ndoe_ushort(fio, item, n, (#item), __FILE__, __LINE__)
 446 #define gmx_fio_ndo_rvec(fio, item, n)              gmx_fio_ndoe_rvec(fio, item, n, (#item), __FILE__, __LINE__)
 447 #define gmx_fio_ndo_ivec(fio, item, n)              gmx_fio_ndoe_ivec(fio, item, n, (#item), __FILE__, __LINE__)
 448 #define gmx_fio_ndo_string(fio, item, n)            gmx_fio_ndoe_string(fio, item, n, (#item), __FILE__, __LINE__)
 449
 450
 451
 452 #endif