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[RT 58464] patching to allow file names with spaces
2010-07-23
C
h
ris Fields
[RT 58464] patchi
n
g
t
o
allow file nam
e
s with spaces
commit
|
commitdiff
|
tree
2010-07-05
Chri
s
F
i
elds
small
fixes, bu
t
the
previ
o
us code does wor
k
when setting
.
.
.
commit
|
commitdiff
|
tree
2010-07-04
Chri
s
Field
s
spelling
commit
|
commitdiff
|
tree
2010-07-01
Chris
F
ields
move tests over to tempfile use (tmpdir no
t
being cleaned up)
commit
|
commitdiff
|
tree
2010-07-01
Chris Fields
move to t
e
mpfiles f
o
r cleanup
commit
|
commitdiff
|
tree
2010-07-01
Chris Fi
e
l
d
s
algor
i
t
hm
c
an be SSEARCH as w
e
ll; use test_out
p
ut_file
.
.
.
commit
|
commitdiff
|
tree
2010-07-01
C
h
ris Fields
conti
g
s off
w
ith Ubuntu p
a
ckaged M
A
Q
commit
|
commitdiff
|
tree
2010-06-30
Chr
i
s Fiel
d
s
no_sequen
c
e
s
-> num
_
seq
u
ences
commit
|
commitdiff
|
tree
2010-06-30
Chris Fi
e
lds
some tweaks to get rid of warni
n
gs
commit
|
commitdiff
|
tree
2010-06-30
Chris Fields
mor
e
rob
u
st call
to ulimit
commit
|
commitdiff
|
tree
2010-06-30
C
h
r
is Fields
is
(
), not
o
k()
commit
|
commitdiff
|
tree
2010-06-30
Chris Fields
s
kip if ver
s
i
o
n greater than
1
.
2
(old primer3 code)
commit
|
commitdiff
|
tree
2010-06-30
Chris Fi
e
lds
a
d
d
v
ersion() (backport from p
r
imer
3
redux)
commit
|
commitdiff
|
tree
2010-06-30
Chr
i
s Fields
align left
commit
|
commitdiff
|
tree
2010-06-30
Chri
s
Fields
f
i
x
odd
v
erbo
s
ity
-
dependent bug with EMBOSS
t
ests
commit
|
commitdiff
|
tree
2010-06-30
Chr
i
s Fields
add minimal
g
itignor
e
commit
|
commitdiff
|
tree
2010-06-30
C
h
ris Field
s
add
ul
i
mit -n check, a
s
t
h
e
se tests fail from
t
o
o many
.
.
.
commit
|
commitdiff
|
tree
2010-06-30
Chris Fields
ad
d
email
commit
|
commitdiff
|
tree
2010-06-30
Chris Fields
c
o
rrect skipped n
u
mber
o
f tests
commit
|
commitdiff
|
tree
2010-06-30
Chris F
i
elds
s
k
i
p test c
o
unt off, f
i
xed
commit
|
commitdiff
|
tree
2010-06-30
Chr
i
s Field
s
Me
r
g
e
b
r
a
nch 'master' o
f
github
.
com:bioperl/b
i
oper
l
-run
commit
|
commitdiff
|
tree
2010-06-06
Chris Fields
add def
a
ult manifes
t
commit
|
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|
tree