repo.or.cz
/
bioperl-run.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
Merge branch 'master' of github.com:bioperl/bioperl-live
2011-09-29
Chris
F
ields
Merge
branc
h
'mast
e
r' o
f
github
.
com:bioperl/bio
p
erl
.
.
.
commit
|
commitdiff
|
tree
2011-09-22
Chris
F
i
elds
Merge pull re
q
u
est
#24 fr
o
m carandraug/bp_genbank_ref_extractor
commit
|
commitdiff
|
tree
2011-07-26
Chr
i
s
Fields
Merg
e
pull
request #19 from carandraug/script/ex
t
ract_f
e
at
u
r
.
.
.
commit
|
commitdiff
|
tree
2011-07-25
Chris F
i
elds
Merge pul
l
reque
s
t
#18 fro
m
carandraug/script/p
e
rl
.
.
.
commit
|
commitdiff
|
tree
2011-07-25
Chr
i
s Fields
Me
r
ge pu
l
l request
#17 from car
a
ndr
a
ug/
m
aster
commit
|
commitdiff
|
tree
2011-06-20
Chris Field
s
Merge pull re
q
uest #16
f
r
o
m ch
a
dadavis/master
commit
|
commitdiff
|
tree
2011-06-02
Chris F
i
elds
Merge
p
ull request
#
15
f
rom
tupinek
/
maste
r
commit
|
commitdiff
|
tree
2011-05-10
Chris Fields
fix spelling err
o
rs, fi
x
es #32
2
8
commit
|
commitdiff
|
tree
2011-04-13
Ch
r
is F
i
elds
f
i
x
sk
i
p
test count (off
b
y 1)
commit
|
commitdiff
|
tree
2011-04-13
Chris
F
ie
l
ds
Merge branch 'topic/bug
_
3196', fixes #3
1
9
6
but ne
e
ds
.
.
.
commit
|
commitdiff
|
tree
2011-04-13
Chris Fields
Merge remote
branch '
w
kre
t
zs
c
h/master
'
commit
|
commitdiff
|
tree
2011-02-14
Chris Fiel
d
s
Merge branch
'
master' of gi
t
hub
.
com:bioperl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2010-11-09
C
h
r
i
s Fields
Merge
branch 'top
i
c/
g
ju
g
gler_tree_fixes'
commit
|
commitdiff
|
tree
2010-11-08
Chris
Fi
e
lds
Merge branch 'mas
t
er' of h
t
tps://git
h
ub
.
com/gjuggler
.
.
.
commit
|
commitdiff
|
tree
2010-08-17
Chris Fields
Mer
g
e bran
c
h
'circular'
commit
|
commitdiff
|
tree
2010-07-23
Chris Fields
[RT 584
6
4] patchi
n
g
to allow file names
with spaces
commit
|
commitdiff
|
tree
2010-07-23
C
h
ris Fields
Me
r
ge branch 'topi
c
/
cjfield
s
_interpro_get
_
dbxref'
commit
|
commitdiff
|
tree
2010-07-03
Chris Fields
Merge
branch 'topic/species
_
p
roxy
'
commit
|
commitdiff
|
tree
2010-06-29
Chris F
i
eld
s
Merge br
a
n
ch 'master
'
into to
p
ic/
s
pecie
s
_proxy
commit
|
commitdiff
|
tree
2010-06-22
Chris Field
s
fi
x
conf
l
i
c
t
commit
|
commitdiff
|
tree
2010-06-10
Chris Fields
B
en's changes to
fix b
u
g w
i
th
f
ile, along with comment
.
.
.
commit
|
commitdiff
|
tree
2010-06-07
Ch
r
is Fields
Mer
g
e branch 'topic/bu
g
3089'
commit
|
commitdiff
|
tree
2010-06-06
Chris Fields
Merge Brian's branch
commit
|
commitdiff
|
tree
2010-06-04
C
h
ris Fields
Merge branch 'mas
t
er' of github
.
com:bioperl
/
bi
o
perl
.
.
.
commit
|
commitdiff
|
tree
2010-05-25
Chris Field
s
Merge branch 'master' of github
.
com:bioperl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2010-05-20
Chris F
i
elds
c
a
n't l
o
okup an undefined value
a
s an
e
x
e
cut
a
b
le
commit
|
commitdiff
|
tree
2010-05-20
Chris Field
s
Merge branch 'mast
e
r' of g
i
thub
.
com:biop
e
r
l/bioperl
.
.
.
commit
|
commitdiff
|
tree
2010-05-20
Chris Fields
Merge bran
c
h 'master'
of g
i
t
h
u
b
.
com:biop
e
rl
/
bioperl
.
.
.
commit
|
commitdiff
|
tree
2010-05-17
C
hri
s
Fields
M
erge
b
ranch 'master' of git@github
.
c
om:bio
p
erl/
b
ioperl
.
.
.
commit
|
commitdiff
|
tree
2010-05-10
c
j
fields
make tes
t
l
e
ss pro
n
e to v
o
latile changes
commit
|
commitdiff
|
tree
2010-03-06
cjf
i
elds
fix remoteblast p
a
rs
i
ng (almost comp
l
e
t
e refactor o
f
.
.
.
commit
|
commitdiff
|
tree
2010-03-05
cjf
i
eld
s
n
e
xt
,
n
o
t re
d
o
commit
|
commitdiff
|
tree
2010-03-04
cjf
i
e
lds
A
d
d a
f
i
n
i
te number of att
e
mpts for re
p
ort retrieval
commit
|
commitdiff
|
tree
2010-03-04
c
j
fields
rem
o
te BLAST is
t
imi
n
g out when usi
n
g C
D
D
and r
p
sblast
commit
|
commitdiff
|
tree
2009-11-25
cjfields
add n p
a
ram
e
ter (not tested) courtesy Nevo Ban
d
(not
.
.
.
commit
|
commitdiff
|
tree
2009-09-16
cjfields
[cage cle
a
ning]
commit
|
commitdiff
|
tree
2009-07-03
cj
f
iel
d
s
catch edge
cases w
h
e
r
e w
e
unintenti
o
nally pass
an undef
.
.
.
commit
|
commitdiff
|
tree
2009-05-04
cjfields
minor fo
r
matting
f
ix
commit
|
commitdiff
|
tree
2009-02-23
cjfields
first pass at a Komodo
Bi
o
P
erl template file
commit
|
commitdiff
|
tree
2009-01-15
cjfields
D
on'
t
q
u
otemeta if
u
si
n
g W
i
n
dows
commit
|
commitdiff
|
tree
2008-12-20
c
j
fields
remove BPlite test
s
completely
commit
|
commitdiff
|
tree
2008-12-20
cjfields
Remove
BP
l
it
e
from use
commit
|
commitdiff
|
tree
2008-12-11
cj
f
ields
[
b
ug 27
0
7]
commit
|
commitdiff
|
tree
2008-12-03
cjfields
Reorganiz
e
Too
l
s test
s
(
n
eeds
s
ome more splitting)
commit
|
commitdiff
|
tree
2008-11-28
cjf
i
eld
s
mo
v
e into d
i
rectory struct
u
re
commit
|
commitdiff
|
tree
2008-11-25
cjfields
po,
not poa
commit
|
commitdiff
|
tree
2008-11-25
cjfields
split up AlignIO tes
t
s
commit
|
commitdiff
|
tree
2008-11-17
cjfields
[tests]
commit
|
commitdiff
|
tree
2008-02-11
cjfields
remov
e
c
o
m
m
ent (make sure tempfile/tempdirs
s
tored
.
.
.
commit
|
commitdiff
|
tree
2008-02-11
cjfields
Fix
f
or bug 2413
.
Shoul
d
n't we delegate all IO-rel
a
ted
.
.
.
commit
|
commitdiff
|
tree
2007-10-23
cjfields
bug 2367
commit
|
commitdiff
|
tree
2007-07-06
c
jfields
Must al
l
o
w ot
h
er
SearchIO re
a
dm
e
th
o
ds (an
y
thing that
.
.
.
commit
|
commitdiff
|
tree
2007-01-19
cj
f
ields
cha
n
g
e
F
ile::Pa
t
h verbo
s
ity to only
be
TRUE w
h
en debugging
commit
|
commitdiff
|
tree
2007-01-18
cjfie
l
ds
remove
c
omments;
c
leanup() sh
o
uld now wo
r
k (fingers
.
.
.
commit
|
commitdiff
|
tree
2007-01-18
cjfields
r
evert back to no
r
mal from
debugging
commit
|
commitdiff
|
tree
2007-01-18
cjfields
Bug 2
1
83
commit
|
commitdiff
|
tree