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update Changes doc
2017-09-11
Chris Fiel
d
s
update Changes doc
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commitdiff
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tree
2017-09-11
Chris Fiel
d
s
fit
S
ABlast ski
p
number
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tree
2017-09-11
Chris
F
i
e
l
ds
a
d
d Bio:
:
FeatureIO as a
r
ec
o
mmended dist
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tree
2017-09-11
Ch
r
i
s Fields
ski
p
if
n
o Bio::Featu
r
e
IO
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|
commitdiff
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tree
2017-09-11
Chris Fields
fix Phastc
o
ns a
n
d
Match, has a r
e
q fo
r
Bio::FeatureIO
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commitdiff
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tree
2017-09-11
Chris Fields
fix
p
ass
-
thru test count
(
o
ff by on
e
)
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|
commitdiff
|
tree
2017-09-11
C
h
ris Fie
l
ds
bump run v
e
rsion
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tree
2016-12-19
Chris Field
s
shut o
f
f emboss
and wise tests for now
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|
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tree
2016-12-19
Chris Fie
l
ds
retry
non-sudo contain
e
rized approach
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|
commitdiff
|
tree
2016-12-19
Chr
i
s Fields
t
est u
s
ing sudo, b
u
t maybe try
u
s
i
n
g a
l
oc
a
l ins
t
all
.
.
.
commit
|
commitdiff
|
tree
2016-12-19
Chris Fi
e
lds
make exec
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|
commitdiff
|
tree
2016-12-19
Chris
F
ields
fix pat
h
, and
turn off
sam
t
ools
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|
commitdiff
|
tree
2016-12-19
C
h
ris Fields
initial tes
t
i
n
stall
commit
|
commitdiff
|
tree
2016-12-19
Chri
s
Fields
a
d
d initial install scri
p
t
dir
e
ctory
,
with
s
amtool
s
.
.
.
commit
|
commitdiff
|
tree
2016-12-19
Chris
F
ields
run latest CPAN r
e
le
a
se of BioPerl
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|
commitdiff
|
tree
2016-12-19
Chris Fields
shut off s
o
me
t
est
s
s
o
we can focus
on a few fai
l
ing
.
.
.
commit
|
commitdiff
|
tree
2016-12-19
Chris
Fi
e
l
d
s
oo
p
s, forgot Chang
e
s but it is a minor release for
.
.
.
commit
|
commitdiff
|
tree
2016-12-19
Chris
F
ields
a
dd in code to ad
d
v
ersion to META
f
iles
commit
|
commitdiff
|
tree
2016-12-17
Chris Fields
remov
e
SOA
P
dependenc
y
, since re
l
eva
n
t
m
odules no longer
.
.
.
commit
|
commitdiff
|
tree
2016-12-17
Chris
F
ields
bump VERSION
commit
|
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|
tree
2016-12-17
C
hris
F
i
e
l
ds
SOAP eutils API not supp
o
rted since 2015, modules a
r
e
.
.
.
commit
|
commitdiff
|
tree
2016-12-17
Chris F
i
elds
the
s
e
s
hould not be e
x
ecutable out of the
b
ox
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|
commitdiff
|
tree
2016-12-17
Ch
r
is Fields
C
lean
u
p a bit
commit
|
commitdiff
|
tree
2016-12-17
C
h
ris Fields
add poss
i
ble switch for samtoo
l
s
d
ebugging
commit
|
commitdiff
|
tree
2016-12-17
Chris Fields
d
eversion
R
EADME, add Changes for updated release
commit
|
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|
tree
2016-12-17
Chris
F
ie
l
ds
G
et
rid of generated MYMETA file
commit
|
commitdiff
|
tree
2016-12-17
Chris Fields
rem
o
ve ge
n
erated index
commit
|
commitdiff
|
tree
2016-12-17
Chris Fi
e
l
d
s
bump versions
commit
|
commitdiff
|
tree
2016-12-17
Ch
r
is Fields
fix samtools to work w
i
th modern versions;
w
e sho
u
l
d
.
.
.
commit
|
commitdiff
|
tree
2016-09-13
Chris Fields
f
i
x for bug mentioned in https://githu
b
.
com/bioperl
.
.
.
commit
|
commitdiff
|
tree
2016-07-17
Chris Fiel
d
s
t
urn o
f
f Bio::DB::Sam fo
r
now
commit
|
commitdiff
|
tree
2016-07-17
Chris F
i
elds
try hacking
i
n
the samtools insta
l
lat
i
on location
commit
|
commitdiff
|
tree
2016-07-17
Chris Fi
e
lds
ad
d
a few more
vett
e
d dist
s
commit
|
commitdiff
|
tree
2016-07-17
Chr
i
s Fi
e
lds
t
weak travis, will have
t
o pla
y
w/ apt to get
dependencie
s
in
commit
|
commitdiff
|
tree
2016-07-17
Chris Fields
remove bad
c
h
aract
e
r
commit
|
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|
tree
2016-07-17
C
hris Fie
l
ds
t
ry tr
i
g
ge
r
ing tr
a
vi
s
commit
|
commitdiff
|
tree
2016-07-17
Ch
r
is Fields
g
o
tta install biope
r
l first!
commit
|
commitdiff
|
tree
2016-07-17
Chris Fields
a
d
d travis-ci fil
e
commit
|
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|
tree
2015-01-31
Chris Fields
convert to mar
k
down for consi
s
tency
commit
|
commitdiff
|
tree
2015-01-31
Ch
r
is Fields
convert to markdo
w
n for cons
i
s
t
ency
commit
|
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|
tree
2013-08-09
Chris Fields
M
erge pull
r
equ
e
st
#60 from
Ma
t
tOa
t
es
/
master
commit
|
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|
tree
2012-08-29
Chris Fi
e
lds
Mer
g
e pu
l
l reque
s
t #8 from daisieh/bu
g
_3381_2
commit
|
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|
tree
2012-08-29
Chris
Fi
e
lds
Merge pull request #
6
from daisieh/
b
ug_3380
commit
|
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|
tree
2012-08-24
Chris Fie
l
ds
Merge pu
l
l request #39 from daisieh
/
b
u
g333
1
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|
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|
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2012-08-24
C
h
ris Fie
l
ds
Merge pu
l
l reque
s
t #40 f
r
om c
w
ittmer/
m
aster
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|
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|
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