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2010-03-04	cjfields	Add a finite number of attempts for report retrieval	commit \| commitdiff \| tree
2010-03-04	cjfields	remote BLAST is timing out when using CDD and rpsblast	commit \| commitdiff \| tree
2009-11-25	cjfields	add n parameter (not tested) courtesy Nevo Band (not...	commit \| commitdiff \| tree
2009-09-16	cjfields	[cage cleaning]	commit \| commitdiff \| tree
2009-07-03	cjfields	catch edge cases where we unintentionally pass an undef...	commit \| commitdiff \| tree
2009-05-04	cjfields	minor formatting fix	commit \| commitdiff \| tree
2009-02-23	cjfields	first pass at a Komodo BioPerl template file	commit \| commitdiff \| tree
2009-01-15	cjfields	Don't quotemeta if using Windows	commit \| commitdiff \| tree
2008-12-20	cjfields	remove BPlite tests completely	commit \| commitdiff \| tree
2008-12-20	cjfields	Remove BPlite from use	commit \| commitdiff \| tree
2008-12-11	cjfields	[bug 2707]	commit \| commitdiff \| tree
2008-12-03	cjfields	Reorganize Tools tests (needs some more splitting)	commit \| commitdiff \| tree
2008-11-28	cjfields	move into directory structure	commit \| commitdiff \| tree
2008-11-25	cjfields	po, not poa	commit \| commitdiff \| tree
2008-11-25	cjfields	split up AlignIO tests	commit \| commitdiff \| tree
2008-11-17	cjfields	[tests]	commit \| commitdiff \| tree
2008-02-11	cjfields	remove comment (make sure tempfile/tempdirs stored...	commit \| commitdiff \| tree
2008-02-11	cjfields	Fix for bug 2413. Shouldn't we delegate all IO-related...	commit \| commitdiff \| tree
2007-10-23	cjfields	bug 2367	commit \| commitdiff \| tree
2007-07-06	cjfields	Must allow other SearchIO readmethods (anything that...	commit \| commitdiff \| tree
2007-01-19	cjfields	change File::Path verbosity to only be TRUE when debugging	commit \| commitdiff \| tree
2007-01-18	cjfields	remove comments; cleanup() should now work (fingers...	commit \| commitdiff \| tree
2007-01-18	cjfields	revert back to normal from debugging	commit \| commitdiff \| tree
2007-01-18	cjfields	Bug 2183	commit \| commitdiff \| tree

BioPerl wrappers

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