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small fix: RNAMotif can have empty files (will add a better workaround later)
2007-03-30
cjfields
sma
l
l fix:
RNAMotif c
a
n
ha
v
e empty f
i
les (will add
.
.
.
commit
|
commitdiff
|
tree
2007-03-29
cjfi
e
lds
f
ix some
fun
k
in
e
ss with
pipes; may s
w
i
tch to IP
C
:
:Run
.
.
.
commit
|
commitdiff
|
tree
2007-03-20
c
j
fields
Al
l
infernal
p
rograms now work; needs some more fine
.
.
.
commit
|
commitdiff
|
tree
2007-03-19
cjfi
e
l
ds
bug
2241
commit
|
commitdiff
|
tree
2007-03-14
c
jfields
s
m
all f
i
xes
commit
|
commitdiff
|
tree
2007-03-13
c
j
fields
I
P
C
::R
u
n (required for G
l
i
mmer, Genemar
k
wrap
p
ers)
commit
|
commitdiff
|
tree
2007-03-13
cjfield
s
GeneM
a
rk, Glimme
r
wrapper modules
,
tests, and test
.
.
.
commit
|
commitdiff
|
tree
2007-02-17
cjfields
c
msearch n
o
ws works; rest ho
p
efully by Mon
.
commit
|
commitdiff
|
tree
2007-02-16
cjfields
Infernal
w
rappe
r
(not functio
n
al yet)
commit
|
commitdiff
|
tree
2007-02-07
cjfields
updat
e
s and small tweaks
commit
|
commitdiff
|
tree
2007-02-07
cjf
i
elds
erpin w
r
ap
p
er (needs more
work
.
.
.
)
commit
|
commitdiff
|
tree
2007-02-05
cjfield
s
A
l
low outfile or tempfile
(fo
r
downstream work)
commit
|
commitdiff
|
tree
2007-02-04
cjfields
obscure or
i
gin
s
a bit more (hehehe
commit
|
commitdiff
|
tree
2007-02-04
c
jfields
RNA
M
o
ti
f
tool
s
w
r
a
pp
e
r
commit
|
commitdiff
|
tree
2006-10-26
cjf
i
elds
Change to Test:
:
More
commit
|
commitdiff
|
tree
2006-10-26
cjfields
A
dd
T
e
s
t::More (apparently was
n
't
a
d
d
e
d)
commit
|
commitdiff
|
tree
2006-10-26
cjfields
Add
s
ome
POD
f
or CLOSE()
commit
|
commitdiff
|
tree
2006-10-26
cjfields
Added CLOSE() tied file
h
and
l
e
me
t
h
o
d (bug
2126
)
commit
|
commitdiff
|
tree
2006-10-13
cjfi
e
lds
Revert tests; r
e
peated calls now work (expected
behavior)
commit
|
commitdiff
|
tree
2006-10-10
cjfields
Fix tests; need t
o
look
at Anal
y
sis::soap::results()
commit
|
commitdiff
|
tree
2006-07-11
cjfields
Bug 2040
commit
|
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tree