rework tempfile handling to explicitly close a filehanle - assigning it to undef...
commitb0872698ac11dcb325d4955396d0660caa10ec7e
authorjason <jason@bioperl.org>
Fri, 28 Mar 2003 22:42:08 +0000 (28 22:42 -0000)
committerjason <jason@bioperl.org>
Fri, 28 Mar 2003 22:42:08 +0000 (28 22:42 -0000)
treee8fb927fb6242ca02492bbca3d06c845fcfaf86b
parent5d214ad933b0ac0a34a06713343b92abdfc5b729
rework tempfile handling to explicitly close a filehanle - assigning it to undef leaves it open and causes the left-open filehandle errors we've seen

svn path=/bioperl-run/trunk/; revision=13408
33 files changed:
Bio/Tools/Run/Alignment/Clustalw.pm
Bio/Tools/Run/Alignment/DBA.pm
Bio/Tools/Run/Alignment/Lagan.pm
Bio/Tools/Run/Alignment/Sim4.pm
Bio/Tools/Run/Alignment/StandAloneFasta.pm
Bio/Tools/Run/Alignment/TCoffee.pm
Bio/Tools/Run/Blat.pm
Bio/Tools/Run/Coil.pm
Bio/Tools/Run/EMBOSSApplication.pm
Bio/Tools/Run/Eponine.pm
Bio/Tools/Run/FootPrinter.pm
Bio/Tools/Run/Genewise.pm
Bio/Tools/Run/Genscan.pm
Bio/Tools/Run/Hmmpfam.pm
Bio/Tools/Run/Phylo/Molphy/ProtML.pm
Bio/Tools/Run/Phylo/PAML/Codeml.pm
Bio/Tools/Run/Phylo/PAML/Yn00.pm
Bio/Tools/Run/Phylo/Phylip/Base.pm
Bio/Tools/Run/Phylo/Phylip/Consense.pm
Bio/Tools/Run/Phylo/Phylip/DrawGram.pm
Bio/Tools/Run/Phylo/Phylip/DrawTree.pm
Bio/Tools/Run/Phylo/Phylip/Neighbor.pm
Bio/Tools/Run/Phylo/Phylip/ProtDist.pm
Bio/Tools/Run/Phylo/Phylip/ProtPars.pm
Bio/Tools/Run/Primate.pm
Bio/Tools/Run/Prints.pm
Bio/Tools/Run/Profile.pm
Bio/Tools/Run/Promoterwise.pm
Bio/Tools/Run/Pseudowise.pm
Bio/Tools/Run/RepeatMasker.pm
Bio/Tools/Run/Seg.pm
Bio/Tools/Run/Signalp.pm
Bio/Tools/Run/Tmhmm.pm