repo.or.cz
/
bioperl-live.git
/
tree
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
history
|
HEAD
|
snapshot (
tar.gz
zip
)
Bump RC to 2; will tag, bag, and ship tomorrow after tests
[bioperl-live.git]
/
Bio
/
Tools
/
tree
37b571b4410ae595b54f398a0ee9c1081de5a586
drwxr-xr-x
..
-rw-r--r--
2621
AlignFactory.pm
blob
|
blame
|
history
|
raw
drwxr-xr-x
-
Alignment
tree
|
history
drwxr-xr-x
-
Analysis
tree
|
history
-rw-r--r--
9136
AnalysisResult.pm
blob
|
blame
|
history
|
raw
-rwxr-xr-x
6575
Blat.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
24728
CodonTable.pm
blob
|
blame
|
history
|
raw
-rwxr-xr-x
5854
Coil.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
13872
ECnumber.pm
blob
|
blame
|
history
|
raw
drwxr-xr-x
-
EMBOSS
tree
|
history
-rw-r--r--
5949
EPCR.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
11917
ERPIN.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
10712
ESTScan.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
47555
EUtilities.pm
blob
|
blame
|
history
|
raw
drwxr-xr-x
-
EUtilities
tree
|
history
-rw-r--r--
7325
Eponine.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
11341
Est2Genome.pm
blob
|
blame
|
history
|
raw
-rwxr-xr-x
15103
Fgenesh.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
6156
FootPrinter.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
34792
GFF.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
5294
Gel.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
8900
Geneid.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
14558
Genemark.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
8579
Genewise.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
4976
Genomewise.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
13102
Genscan.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
18532
Glimmer.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
5896
Grail.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
20563
GuessSeqFormat.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
17756
HMM.pm
blob
|
blame
|
history
|
raw
drwxr-xr-x
-
HMMER
tree
|
history
-rwxr-xr-x
5289
Hmmpfam.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
8765
IUPAC.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
16955
Infernal.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
21214
Lucy.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
9318
MZEF.pm
blob
|
blame
|
history
|
raw
-rwxr-xr-x
5109
Match.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
11308
OddCodes.pm
blob
|
blame
|
history
|
raw
drwxr-xr-x
-
Phylo
tree
|
history
drwxr-xr-x
-
Prediction
tree
|
history
drwxr-xr-x
-
Primer
tree
|
history
-rwxr-xr-x
11827
Primer3.pm
blob
|
blame
|
history
|
raw
-rwxr-xr-x
5610
Prints.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
4121
Profile.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
6789
Promoterwise.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
3921
PrositeScan.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
10943
Protparam.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
6101
Pseudowise.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
11534
QRNA.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
14748
RNAMotif.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
5340
RandomDistFunctions.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
3715
RepeatMasker.pm
blob
|
blame
|
history
|
raw
drwxr-xr-x
-
Run
tree
|
history
-rwxr-xr-x
3133
Seg.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
24516
SeqPattern.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
27680
SeqStats.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
9102
SeqWords.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
15927
SiRNA.pm
blob
|
blame
|
history
|
raw
drwxr-xr-x
-
SiRNA
tree
|
history
-rw-r--r--
18000
Sigcleave.pm
blob
|
blame
|
history
|
raw
-rwxr-xr-x
7193
Signalp.pm
blob
|
blame
|
history
|
raw
drwxr-xr-x
-
Signalp
tree
|
history
drwxr-xr-x
-
Sim4
tree
|
history
drwxr-xr-x
-
Spidey
tree
|
history
-rw-r--r--
8834
TandemRepeatsFinder.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
11781
TargetP.pm
blob
|
blame
|
history
|
raw
-rwxr-xr-x
3098
Tmhmm.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
22057
dpAlign.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
7048
ipcress.pm
blob
|
blame
|
history
|
raw
-rwxr-xr-x
6326
isPcr.pm
blob
|
blame
|
history
|
raw
-rwxr-xr-x
10382
pICalculator.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
10597
pSW.pm
blob
|
blame
|
history
|
raw
-rw-r--r--
7910
tRNAscanSE.pm
blob
|
blame
|
history
|
raw