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Bio::Cluster::SequenceFamily - bug fixes and performance
2013-03-26
C
arnë Draug
Bio::
C
lu
s
t
er::Sequen
c
eFami
l
y
- bug fixes
a
nd
per
f
ormance
commit
|
commitdiff
|
tree
2013-03-26
Car
n
ë Draug
doc:
f
i
x indentation, remov
e
hard tabs and trai
l
ing
.
.
.
commit
|
commitdiff
|
tree
2013-03-21
Carn
ë
D
r
aug
recover Generi
c
WebAgent from B
i
o-E
U
tilities
commit
|
commitdiff
|
tree
2013-03-13
Car
n
ë
Draug
split
B
io-Biblio into a separa
t
e distribution
commit
|
commitdiff
|
tree
2013-03-12
C
a
rn
ë
Drau
g
Merge
pull request #53
f
rom bv
a
i
s
v
i
l/master
commit
|
commitdiff
|
tree
2013-03-06
Car
n
ë
D
raug
Bio::Perl - fix i
n
dentation (remo
v
e tabs,
a
nd wei
r
d
.
.
.
commit
|
commitdiff
|
tree
2013-03-04
C
a
r
në
Draug
Don't use a separate
d
efault scalar whe
n
there's a
.
.
.
commit
|
commitdiff
|
tree
2013-03-04
Carnë Dra
u
g
follow perl
r
ecom
m
endations
:
commit
|
commitdiff
|
tree
2013-03-04
Carnë Draug
fix
in
d
entation (remove tabs, a
n
d we
i
r
d
3 spaces in
d
entation)
commit
|
commitdiff
|
tree
2013-03-04
Carn
ë
D
raug
follow perl recommendations:
commit
|
commitdiff
|
tree
2013-03-04
C
arnë Draug
use unti
l
inste
a
d of whil
e
(1){last if
.
.
.
}
commit
|
commitdiff
|
tree
2013-03-04
C
a
r
në Draug
fi
x
indentation
(remove tabs, 3 space and 2 space in
d
entation)
commit
|
commitdiff
|
tree
2013-02-11
Carnë Draug
rem
o
ving
Bio::F
e
a
tureIO an
d
Bio::SeqFe
a
tur
e
::Annotat
e
d
.
.
.
commit
|
commitdiff
|
tree
2013-02-06
C
a
rnë D
r
au
g
maint: m
e
ntion recent
changes to
B
io::Seq
I
O::fasta
commit
|
commitdiff
|
tree
2013-02-06
Carnë Draug
Bio:
:
SeqIO::f
a
sta - remove package va
r
i
abl
e
s for defaults
commit
|
commitdiff
|
tree
2013-02-05
Ca
r
në Dr
a
ug
Bi
o
::SeqIO:
:
fasta - imple
m
ent block
m
e
thod for pretty
.
.
.
commit
|
commitdiff
|
tree
2013-02-05
C
a
rnë D
r
aug
follow perl recommendation
s
:
commit
|
commitdiff
|
tree
2013-01-28
Carnë
D
rau
g
finish mo
v
ing the Bio-DB-EUtilities to the Bio-EUtilities
.
.
.
commit
|
commitdiff
|
tree
2013-01-28
Carnë Draug
Fixing POD
d
ocum
e
ntation
.
Empty line bef
o
r
e =cut to
.
.
.
commit
|
commitdiff
|
tree
2011-09-28
C
a
rnë Dr
a
ug
genbank_ref_extractor: move
'require's to GetOptions
.
.
.
commit
|
commitdiff
|
tree
2011-09-28
Carnë Draug
genbank_r
e
f_extracto
r
:
changed
d
efault a
s
sembly regex
commit
|
commitdiff
|
tree
2011-09-28
C
arnë
D
raug
genbank_re
f
_
e
xtractor: small
typ
o
on doc
u
mentation
commit
|
commitdiff
|
tree
2011-09-28
Carnë Draug
genbank_ref_extractor: ad
d
e
d assembly to expo
r
te
d
data
commit
|
commitdiff
|
tree
2011-09-22
Carnë Draug
g
enban
k
_ref_e
x
tractor: typo on
all in
s
tances of var
.
.
.
commit
|
commitdiff
|
tree
2011-09-22
Carn
ë
Dr
a
ug
genbank_ref_extract
o
r: sm
a
l
l
f
i
xes o
n
P
OD documentatio
n
commit
|
commitdiff
|
tree
2011-09-21
C
arnë Dra
u
g
genbank_ref_extrac
t
or: new script to make search
o
n
.
.
.
commit
|
commitdiff
|
tree
2011-07-25
Carnë
Draug
Fix
bug when u
s
in
g
S
T
D
OUT or writin
g
t
o f
i
le without
.
.
.
commit
|
commitdiff
|
tree
2011-07-25
C
arn
ë
D
raug
Improvements
t
o
POD
commit
|
commitdiff
|
tree
2011-07-25
Carn
ë
Dr
a
ug
replaced identati
o
n tabs for sp
a
ces
commit
|
commitdiff
|
tree
2011-07-25
Carnë Draug
Don't mess wi
t
h $^
W
.
Cont
r
ol wi
t
h warnings prag
m
a ins
t
ead
commit
|
commitdiff
|
tree
2011-07-25
Carnë Draug
sc
r
ipts: adde
d
'use war
n
ings'
to all scrip
t
s without i
t
commit
|
commitdiff
|
tree
2011-07-25
Carnë
D
r
aug
s
cripts
:
repl
a
ced -w
s
witch
b
y use warnings
commit
|
commitdiff
|
tree
2011-07-20
Carn
ë
Draug
Script documen
t
ation f
i
x to
match their
names with
.
.
.
commit
|
commitdiff
|
tree
2011-07-19
C
ar
n
ë
Dra
u
g
Renamed all scripts with
p
rfix bp
_
commit
|
commitdiff
|
tree
