| commit | 9f42b6973813074d2442fc7c0849f92e80d26a79 | |
| author | Carnë Draug <carandraug+dev@gmail.com> | |
| Tue, 26 Mar 2013 06:15:42 +0000 (26 06:15 +0000) | ||
| committer | Carnë Draug <carandraug+dev@gmail.com> | |
| Tue, 26 Mar 2013 06:15:42 +0000 (26 06:15 +0000) | ||
| tree | 02f5e4589b39bffaedc04025d86bbca2e90ff102 | treesnapshot (tar.gz zip) |
| parent | db792bdb8feb8b0a56d4e9cc4caa5b50c70ef659 | commitdiff |
Bio::Cluster::SequenceFamily - bug fixes and performance
* fix bug when accessing the Bio::Species object. If a Bio::Seq object
had no Bio::Species information, can('species') still returned true
but the method would then return undef, and give an error next.
* when using multiple criteria, objects matching more than one criteria
would appear repeated. Not anymore.
* if for some reason there's two equal objects on the family (same
reference), they will also appear only once in the results.
* some improved performance is expected for large families when using
multiple criteria now.
* fix bug when accessing the Bio::Species object. If a Bio::Seq object
had no Bio::Species information, can('species') still returned true
but the method would then return undef, and give an error next.
* when using multiple criteria, objects matching more than one criteria
would appear repeated. Not anymore.
* if for some reason there's two equal objects on the family (same
reference), they will also appear only once in the results.
* some improved performance is expected for large families when using
multiple criteria now.
| Bio/Cluster/SequenceFamily.pm | diffblobblamehistory | |
| Changes | diffblobblamehistory |