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Bio::Cluster::SequenceFamily - bug fixes and performance
2013-03-26
Carnë Draug
Bio::Cluster::
S
e
quen
c
eFamily - bu
g
fixes and perfor
m
ance
commit
|
commitdiff
|
tree
2013-03-26
Carn
ë
Draug
d
o
c: fix indentatio
n
,
remove hard tabs and trailing
.
.
.
commit
|
commitdiff
|
tree
2013-03-21
Car
n
ë Draug
r
ecove
r
Gen
e
r
i
cWe
b
Agent from Bio-EUtilities
commit
|
commitdiff
|
tree
2013-03-13
Carnë Draug
s
p
lit Bio-Bibli
o
into a separate distribution
commit
|
commitdiff
|
tree
2013-03-12
C
a
r
n
ë Draug
M
e
r
g
e pu
l
l req
u
e
s
t #53 from bvaisvil/master
commit
|
commitdiff
|
tree
2013-03-06
Carnë Draug
Bio
:
:Per
l
-
fix indentati
o
n (r
e
m
o
ve tabs, and
w
eird
.
.
.
commit
|
commitdiff
|
tree
2013-03-04
C
a
rn
ë
Draug
Don't u
s
e a sep
a
r
a
te de
f
ault scal
a
r when there's a
.
.
.
commit
|
commitdiff
|
tree
2013-03-04
Carnë Draug
f
ollow perl recomm
e
ndations:
commit
|
commitdiff
|
tree
2013-03-04
Carnë
D
raug
fix indentatio
n
(r
e
move tabs, and weird 3 spaces ind
e
nta
t
ion)
commit
|
commitdiff
|
tree
2013-03-04
Carnë Drau
g
f
ollow perl recomm
e
n
da
t
ions:
commit
|
commitdiff
|
tree
2013-03-04
Carnë Draug
use until inst
e
ad of while(1){last
if
.
.
.
}
commit
|
commitdiff
|
tree
2013-03-04
Carnë Drau
g
fix
i
nd
e
n
t
a
ti
o
n
(remove tabs
,
3 space an
d
2 space indentation)
commit
|
commitdiff
|
tree
2013-02-11
C
arnë Draug
removing Bio::F
e
atureIO and Bio::SeqFeature:
:
Anno
t
ated
.
.
.
commit
|
commitdiff
|
tree
2013-02-06
Carnë
Draug
maint:
mention
r
ecen
t
c
h
anges to Bio::Seq
I
O::fa
s
ta
commit
|
commitdiff
|
tree
2013-02-06
Carnë Dr
a
ug
Bio::SeqIO::fast
a
- remove package variab
l
es f
o
r
d
e
f
a
ults
commit
|
commitdiff
|
tree
2013-02-05
Car
n
ë
Draug
Bio::
S
eqIO::fasta - i
m
pl
e
ment b
l
ock m
e
thod
for pretty
.
.
.
commit
|
commitdiff
|
tree
2013-02-05
Carnë
Draug
follow perl r
e
commend
a
t
i
ons:
commit
|
commitdiff
|
tree
2013-01-28
Carnë Draug
f
i
n
ish m
o
v
i
n
g the
B
i
o
-
D
B-
E
Utilities to the Bio-
E
Utili
t
ies
.
.
.
commit
|
commitdiff
|
tree
2013-01-28
Carnë Draug
F
ixing P
O
D documentation
.
E
m
p
ty line
b
efore
=cut to
.
.
.
commit
|
commitdiff
|
tree
2011-09-28
Carnë Draug
genbank_ref_extractor: move 'require's to G
e
tOpti
o
ns
.
.
.
commit
|
commitdiff
|
tree
2011-09-28
Carn
ë
Draug
genbank_ref
_
ex
t
ractor: change
d
default
assembly regex
commit
|
commitdiff
|
tree
2011-09-28
Carnë Draug
g
enb
a
n
k
_
ref_extractor: small typo on d
o
cumentation
commit
|
commitdiff
|
tree
2011-09-28
Car
n
ë D
r
aug
genbank_ref_ext
r
act
o
r:
a
dd
e
d assembly t
o
exported data
commit
|
commitdiff
|
tree
2011-09-22
Car
n
ë D
r
aug
ge
n
bank_ref_extractor: typ
o
on
a
l
l
instances of var
.
.
.
commit
|
commitdiff
|
tree
2011-09-22
C
arnë Draug
gen
b
a
n
k
_ref_extrac
t
or: small fixes on POD documentatio
n
commit
|
commitdiff
|
tree
2011-09-21
Carnë
D
raug
genbank_ref_ext
r
actor: new scrip
t
to make search on
.
.
.
commit
|
commitdiff
|
tree
2011-07-25
Ca
r
në D
r
au
g
Fix b
u
g
w
h
e
n using ST
D
OU
T
o
r
w
riting to file
w
ith
o
ut
.
.
.
commit
|
commitdiff
|
tree
2011-07-25
C
a
rnë Draug
I
m
prov
e
ments to POD
commit
|
commitdiff
|
tree
2011-07-25
Carn
ë
Draug
repla
c
ed iden
t
ation tabs for spaces
commit
|
commitdiff
|
tree
2011-07-25
Carnë
Draug
Don't mess wi
t
h $^W
.
Cont
r
o
l
with
w
arnings pragma instead
commit
|
commitdiff
|
tree
2011-07-25
Carnë D
r
aug
scripts: added 'us
e
wa
r
ni
n
gs'
t
o
a
ll scri
p
ts without it
commit
|
commitdiff
|
tree
2011-07-25
Carnë Draug
s
c
r
i
p
ts: replac
e
d -w switch
b
y use warnings
commit
|
commitdiff
|
tree
2011-07-20
C
arnë
D
r
a
ug
S
cript do
c
um
e
ntatio
n
f
i
x to mat
c
h their names with
.
.
.
commit
|
commitdiff
|
tree
2011-07-19
C
a
rnë Drau
g
Renamed a
l
l scripts with p
r
fix
b
p
_
commit
|
commitdiff
|
tree
