17 Bio/Tools/AlignFactory.pm
19 Bio/Tools/Blast/HSP.pm
20 Bio/Tools/Blast/HTML.pm
21 Bio/Tools/Blast/Run/LocalBlast.pm
22 Bio/Tools/Blast/Run/Makefile.PL
23 Bio/Tools/Blast/Run/Webblast.pm
24 Bio/Tools/Blast/Run/postclient.pl
25 Bio/Tools/Blast/Sbjct.pm
30 Bio/Tools/RestrictionEnzyme.pm
43 examples/restriction.pl
44 examples/rev_and_trans.pl
45 examples/root_object/Bar.pm
46 examples/root_object/Foo.pm
47 examples/root_object/Outer.pm
48 examples/root_object/error.out
49 examples/root_object/error.pl
50 examples/root_object/filehandle.out
51 examples/root_object/filehandle.pl
52 examples/root_object/read.pl
53 examples/root_object/read.test
54 examples/root_object/read.test2
55 examples/root_object/read.test3
56 Compile/SW/Makefile.PL
61 Compile/SW/libs/alnconvert.c
62 Compile/SW/libs/alnconvert.h
63 Compile/SW/libs/alnrange.c
64 Compile/SW/libs/alnrange.h
65 Compile/SW/libs/asciibtcanvas.c
66 Compile/SW/libs/asciibtcanvas.h
67 Compile/SW/libs/basematrix.c
68 Compile/SW/libs/basematrix.h
69 Compile/SW/libs/btcanvas.c
70 Compile/SW/libs/btcanvas.h
71 Compile/SW/libs/cdna.c
72 Compile/SW/libs/cdna.h
73 Compile/SW/libs/cdnadb.c
74 Compile/SW/libs/cdnadb.h
75 Compile/SW/libs/codon.c
76 Compile/SW/libs/codon.h
77 Compile/SW/libs/codonmapper.c
78 Compile/SW/libs/codonmapper.h
79 Compile/SW/libs/codonmatrix.c
80 Compile/SW/libs/codonmatrix.h
81 Compile/SW/libs/commandline.c
82 Compile/SW/libs/commandline.h
83 Compile/SW/libs/complexconsensi.c
84 Compile/SW/libs/complexconsensi.h
85 Compile/SW/libs/complexevalset.c
86 Compile/SW/libs/complexevalset.h
87 Compile/SW/libs/complexsequence.c
88 Compile/SW/libs/complexsequence.h
89 Compile/SW/libs/compmat.c
90 Compile/SW/libs/compmat.h
91 Compile/SW/libs/database.h
94 Compile/SW/libs/dnamatrix.c
95 Compile/SW/libs/dnamatrix.h
96 Compile/SW/libs/dpenvelope.c
97 Compile/SW/libs/dpenvelope.h
98 Compile/SW/libs/dyna.h
99 Compile/SW/libs/dynlibcross.c
100 Compile/SW/libs/dynlibcross.h
101 Compile/SW/libs/embl.c
102 Compile/SW/libs/embl.h
103 Compile/SW/libs/gene.c
104 Compile/SW/libs/gene.h
105 Compile/SW/libs/genomic.c
106 Compile/SW/libs/genomic.h
107 Compile/SW/libs/genomicdb.c
108 Compile/SW/libs/genomicdb.h
109 Compile/SW/libs/genomicregion.c
110 Compile/SW/libs/genomicregion.h
111 Compile/SW/libs/histogram.c
112 Compile/SW/libs/histogram.h
113 Compile/SW/libs/hscore.c
114 Compile/SW/libs/hscore.h
115 Compile/SW/libs/linesubs.c
116 Compile/SW/libs/linesubs.h
117 Compile/SW/libs/makefile
118 Compile/SW/libs/packaln.c
119 Compile/SW/libs/packaln.h
120 Compile/SW/libs/probability.c
121 Compile/SW/libs/probability.h
122 Compile/SW/libs/protein.c
123 Compile/SW/libs/protein.h
124 Compile/SW/libs/proteindb.c
125 Compile/SW/libs/proteindb.h
126 Compile/SW/libs/proteinsw.c
127 Compile/SW/libs/proteinsw.h
128 Compile/SW/libs/seqaligndisplay.c
129 Compile/SW/libs/seqaligndisplay.h
130 Compile/SW/libs/sequence.c
131 Compile/SW/libs/sequence.h
132 Compile/SW/libs/sequencedb.c
133 Compile/SW/libs/sequencedb.h
135 Compile/SW/libs/sw_wrap.c
136 Compile/SW/libs/sw_wrap.h
137 Compile/SW/libs/transcript.c
138 Compile/SW/libs/transcript.h
139 Compile/SW/libs/translation.c
140 Compile/SW/libs/translation.h
141 Compile/SW/libs/wisebase.h
142 Compile/SW/libs/wiseconfig.c
143 Compile/SW/libs/wiseconfig.h
144 Compile/SW/libs/wiseerror.c
145 Compile/SW/libs/wiseerror.h
146 Compile/SW/libs/wisefile.c
147 Compile/SW/libs/wisefile.h
148 Compile/SW/libs/wisememman.c
149 Compile/SW/libs/wisememman.h
150 Compile/SW/libs/wiseoverlay.c
151 Compile/SW/libs/wiseoverlay.h
152 Compile/SW/libs/wiserandom.c
153 Compile/SW/libs/wiserandom.h
154 Compile/SW/libs/wisestring.c
155 Compile/SW/libs/wisestring.h
156 Compile/SW/libs/wisetime.c
157 Compile/SW/libs/wisetime.h