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[bioperl-live.git] / t / data / map_hem / HEM4-HEM14.fa
blobda995a8cb8ec824cf277491826c03540ab4cce9e
1 >SGD_Scer_YOR278W HEM4 "Uroporphyrinogen III synthase, catalyzes the conversion of hydroxymethylbilane to uroporphyrinogen III, the fourth step in the heme biosynthetic pathway"
2 CTCTCGAGCAAGGTCTATTTTACCTTTCTGTTTCCTTATCCTTTGACACTAAAATTCAAA
3 AAACTCACTAGAAAGTTCACTAAAGCGCCTTAGCTGACTACAGCACAACCCAACCCCAAA
4 AACTAGTGAACTACACACTAAGAGAATTTATGGTATTTCCATAATTGAAGTATATGTACG
5 ATGTATACAATGTAAACAAGAGAGTAATGAAGTGAAGATATGTACACCTAGAGCGAACCA
6 ATGATAATTTGTTTTCTTAATTAAGAAAAACCATTAAAACTGGATTAGATTTCAATAATG
7 AAAAGCTAGGAACAAAAAAAATTGGTCTACTTCCAGCCATTTGCGCTTTATATAGACATA
8 TGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAATGATGGTTTT
9 CTTATCCTGAAGGATCCTGCAAATGAAGTAAGTTCAAAGAATTGAAATGAAATCGCCTTT
10 TATACCCTCGCCGCACCAAGGAGCGCGCTGTGAAAATTTTTCGCTTTATCTCTTAGGGCT
11 CCTACTGTCGGTAGAGAAAAGTTGAGTATATTTAAAGCATGAGGTAACTTTTCTGCCCAT
12 TTTTACTTCTATTTCCATTTGAATTCAGAAAAGTG
13 >MIT_Spar_c261_21317 YOR278W 5' untranslated region, Contig c261 32269 - 34268, 2000 bp (revcom)
14 CGTTCCAAGCAGGGTTTATTCTATTTCTCGGCTCCTTTACCCTGTAACTTCGAGATTCAA
15 AAACTCGCTATAACTTCACTAAAGCGCTTTAGTTGACTACAACACAACCCAACCCCAAAA
16 TAAACTGTCCAACTACACAATACCGAGGATAATCCACGATATTTCGGTGATTGAAGTATA
17 TGTATTACGTATGCAATGTAAGCAAGAAACTAACAAAATGAATATGTACACCTAGAGCGA
18 ACCAATGATAATTTGTTTTCTTAATAAAGAAAAACTATTAAAACTGGATTAGATTTCAAT
19 AATGAAAAGCTAGGAACAGAAAAATTGGTCTACTTCCAGCCATTTGCGCTTTATATAGAC
20 ATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAATGATGGT
21 TCTTTTATCCTGAAGGATAAACGGAAAGCTCCCGATTAAAAACAAGTATAGAGTACTGGA
22 ATAGAATCGCCTTTTATACCCTCCCTCGCCGCATCAAGAAGCGCGCTGTGAAAATTTTTC
23 GTTTTTCTCTTAGGGCTCCCATCCAACTGTCGGCGAGGAAAAGTTGTATATATTTAAAGC
24 ATGAGGTAACTTTGTTGCCCATTATCTTTTTTGTT
25 >MIT_Smik_c492_20940 YOR278W 5' untranslated region, Contig c492 3260 - 5259(revcom), 2000 bp (revcom)
26 ACTTTCAAACACACTCTGGTGTACTCCTCGGTCCCTTCATCTCATTTCTTCAAGATGCAG
27 AACTTCGCCGGAAGTAAACTAAAGTGCTTTAATTAATCAAAAGACAACTTAATTCCCAAA
28 CGGAAATGCAGGCTAGACAAACCGAAGATAATCCCCGATATTTCTGAGTTTAACAAATGT
29 ATGTATAATATGTATGCAATGTAGGCAAGAAAATAACGAAGTGAAGATATGTACACCTAG
30 AGCGAACCAATAATAATTTGTTTTCTTACTAAAGAAAAACTATTAAAACTGGATTAGATT
31 TCAATAATGAAAAGCTAGGAACAAAAGAAATTTGTCTACTTCCAGCCATTTGCGCTTTAT
32 ATAGACATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAAT
33 GATGGTTCTTTTAAACCAAAATTTAAAGAAAAATCTTAACGGTAATATGAGTAGGAGGTT
34 GGAATGGGATCGCTTTTTATACCCTCATTGTGATAAGAGACGCGCAGTGAAAAATTTTCG
35 CTTTTTCTTAGGGCTCCTATCTAACTCTCGGGCGAATAAATATCATGAATGTATTTAAAC
36 GTCAAGTTAGTTAAATGTTTGAGTCTGTTTCTTTT
37 >WashU_Skud_Contig1682.4 YOR278W 5' untranslated region, Contig c1682 3379 - 5378, 2000 bp (revcom)
38 CTCTTCAAACAGACTCCAATTCACTACTGAGCTCTTACCTTGTGACTTCAAGACTCACTA
39 CTCAGTTGAAAGACACGCTCAGTACCAAATTCGGCTGCGAGGCAACTAACGCCTTTAAAC
40 AGGTAGGTAAGGAACAATACCGAAAGGCCATCTCCGATGTTTCGAAGATTGGCAAATGTA
41 TATATTATGTATGCAATATAGGCAAGATGATAACGAAGTAGAGATATGTACACCTAGAGC
42 GAACCAATGATAATTTGTTTTCTTAATGAAGAAAGTATTAAAACTGGATTAGATTTCAAT
43 AATGAAAAGCTAGGAATAAAAGAGATTGGTCTACTTCCAGCCATTTGCGCTTTACATAGA
44 CATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAATGATGG
45 TTCTATTTAAAATGAAATCTAAAGATAAACCCTAGTCATAATCAAGTGGGTTGTGTTAAA
46 ATACAAGCACCTTTTATACTCTCGCAGCGTCAGTGGCGCGTTGTGAAAAATTTTCACTTT
47 TTCTCAGGGCTTTTACCCAACTGCCGACAAATAAAAGCCGTATTTAAGGAATGTGATTAG
48 TTTACTTTCCAATGCTTTCTCTTTTTTGTAGGGTA
49 >WashU_Sbay_Contig635.57 YOR278W 5' untranslated region, Contig c635 91073 - 93072, 2000 bp (revcom)
50 ACGTACAGATGGCGTCTCCTCCTTTCGCGAGCCCCTTGCCTTGTGACTTCAGCCTAACTT
51 CTTGACTAGAAGATACAACAAGAAATACTCAAATCGGTTATTGTGCAACTCATCCCTCAG
52 ACAGTTTGGTAAGAAACACCGAAGACTATTTCCGATATCTCAAAGAATGACAAAAGTATA
53 CATTATATATGCAAGAGAGGCAAGAAAAGAGTAAAAAAGAGTAAAAAAAACATGTACACC
54 TAGAGCGAACCAGTGATAATTTGCTTCTCAATGAAGAAAAAGCGATTAAAACTGGATTAG
55 ATTTCATTAAAGAAAAGCTAGGAACAAAGAAATTGGTCTACTTCCAGCCATTTGCGCTTG
56 ACATAGACATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGA
57 ATGATGGCTCTTTTAAATTGAGATCTAAAAGAAATATCCTGGAAAAGAGTAGAGAAGAGT
58 CCAAACTGTAGGAATTCAATCGCTTTTTATACTCTCATCGCGGAAAAGACGCGCTGTGAA
59 AAATTTTCTCTTTTTCTTAGGGCTCCTATCCAGCTGCCTGCGAACAAAAGCCGTATTTAA
60 AGCATGATTTTCACTACTATGTATGTTCTTTCTGC
61 >SGD_Scer_YER014W HEM14 "Protoporphyrinogen oxidase, a mitochondrial enzyme that catalyzes the seventh step in the heme biosynthetic pathway, converting protoporphyrinogen IX to protoporphyrin IX"
62 TATACAAGCTCTTTTTGGCGTTCTCAATTGCACTTTACTCGATATGTTTGAATTGGTGTT
63 CTTCGCGAATATCTCTATTGTTCTCTCTATTATACTATTTCTTTTTTTGAATACTCCGCG
64 ACTCCGAAGCAACAAAGTGTCGAAGGCAAGTTCAAAGGCGTTTTGTAACTAAACGAGCAA
65 TGGCAGCTTTCAATTAAAGAAAGGTTAGCGTTACTCTGTGATTTTTTTCATGTAAAAATT
66 CTCAAGAGAGATAAAGTTGTTAAAAAATTAAATATAGGTCTATAAAACTCGATAATTATA
67 ATGCATAAAAAGCTAACAATGT
68 >MIT_Spar_c425_6072 YER014W 5' untranslated region, Contig c425 34016 - 36015, 2000 bp (revcom)
69 TATTCGAGCCCTTTCCCGCGTTCCCAATTGTACCTTCCTCGATAGGATTGAATTGGTATC
70 CTTCGCGGATCTCTCTATTGTTCTCTCTATTATTCTTTTTCTTTTTTAAATACTCCGCGA
71 CTCCGAAGCAACAAAATGTCGAAGGCAAGATGAAAGGCGTTTTGCAACTAAACGAGTAAT
72 GGCAGCTTTTAATTAAATAACGGTCAGCATTACTCTATAACTTTTCACATAAAATCCTCG
73 AAGAAGGAAAAATTGATAATCAATTTACCGAAGAATGAATATAGGTCTATAAAAATTCAA
74 TAATTATAGATGCATAAAAAGC
75 >MIT_Smik_c283_5928 YER014W 5' untranslated region, Contig c283 42606 - 44605, 2000 bp (revcom)
76 TATTGAAGCTCTCTCCACTATTTCTTTAATCGCGCTATACTAGATATGGTTAAACTGCTA
77 TCTTTTGCAAATCCCTCTATTGTTCTTTCCATTACTCTTTTCTTTTTTAAATACGGACTC
78 CGAAGCAACAAGGTCGAAGGCAAGCTGAAAGGCATTTTACAACTAAACGAGCAATGGTAG
79 CTTTTGATTGAATAAATTATTATCATTATTTTGTTATTTGTCCCACGAAATTCTCGTTGA
80 AAGCAAGGTTCGTAAGGATTTATCAAATGTTAAATATAGATCTATAAAAATTGAATAGTA
81 ATAATAACAAGGGATGGTGTTA
82 >MIT_Sbay_c84_6418 YER014W 5' untranslated region, Contig c84 10802 - 12801(revcom), 2000 bp (revcom)
83 TGTCGAAGTTCTCCTTTATTCCGCTGTTTCTTACGGAATCCAGCGAGACTGTTGTCCTTT
84 CGCATCCTTCTATTGTTCTTCCTTATTGTTCTCGTTTTTTTTATACTCTGCGACTCCGAA
85 ACAACAAAATCTCGAAGGCAAGCTAAGGTAAAAATATTCACCACTAAACGAGCAATGACA
86 GTTATATTCAAACGTCATTCTACTTTTTTGCCAGAGAAGTCCTCACTGGAGACGAAGTTG
87 GTAAATGCTTTATTTATATTAAACGTAGATCTATAAAGTTTAAATAGTTTATAATGCTTA
88 ACAAGGGACGATGTTATCTCTT