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[bioperl-live.git] / t / data / map_hem / HEM3-HEM15.fa
blob3a5083c43c4a5238d467e6b86b444e431c3a875f
1 >SGD_Scer_YDL205C HEM3 "Phorphobilinogen deaminase, catalyzes the conversion of 4-porphobilinogen to hydroxymethylbilane, the third step in the heme biosynthetic pathway; localizes to both the cytoplasm and nucleus; expression is regulated by Hap2p-Hap3p"
2 AGTACGTGTGTATTTACCAACTACAAATTTATCTAGATTTTCTTCGCTTTTCTTTTTTTC
3 TATTGTTCTAGATATTAATACGGGATGAGAAGAACAGAATATTCAAAATCTAATACAGCC
4 CTGTACCATGCAAACACGAGCGTCAATCTGCCAATGACCTTGAATTCAGGCTATGTGTAG
5 CAATAATACAGATAGTTAGTAGCCTCGTTTATATAAAGCGTTCCTTTACTTTTTCATTTT
6 CTTTCTTTTTTTATGTTTGATTTTTTTACTTTTTCACTTTAAAAAATTGCTGAAATTTTC
7 GTAGCCAAAAAAAAGACCTTCATTGCTTACTCATCGGTTTCTTATTGGTCAGACGCTCCC
8 CAGGGTCAATTGACAAGGAGAGAAGGAATGTTATATGGGAATTGCTGCGTAAAGATGGTC
9 AAAAATCCTGGACTGCCGTACGAACGACAATGTAAGGATGACTGCATTAGCCAGAAAGAC
10 ATCTTTACCCCCGGTGCTGCCAGGGAGCAAAATAATTACGAAAAGTGGACGCAAAGTTAA
11 CTTAAACTACAAGGGTAGCAGCAGAATGTGTCGGTGGTACCGGTGTGATAATGCCCCATT
12 TGAGATGCTTGTAATTGTGGCCTAGCAATAAGAACGCAAGGCGTTTTTGTTGAAAGGAGA
13 ACAAGGTTAGACGGTGACGTTTAGGCGCATAGGCAATCTCCCCTTATTGTTCACCCTTAT
14 TTCCACCCTCAAACGATAAAGCTTGCTACTTTGATGAAAAAAATATATAAAAGGGATTGA
15 AAAGCAGATCAATTATGTAGCAATAGTAGTAATAACTTGTTCAATTGCTTGTCTCAACTT
16 GCCACAAACTATCATCAACA
17 >MIT_Spar_c429_3020 YDL205C 5' untranslated region, Contig c429 77420 - 79419(revcom), 2000 bp (revcom)
18 AGTACGTGTGTATTTATCAACTACAAAATTTATCTAGATTTTCTTGCCTTTTCCTTTTTC
19 TATTGTTCTAGATACTAATACGGGATGAGAAGAACAGAATATTCAAAATGTAAAACAGCC
20 CTGTACCATGCAAACACGAGCCTCAATCTGCCAATGACCTTGAATCCAAGCTATGTGTAG
21 CAATAATACAGATGATTGATTGGCGTCGTTTATATAAAGCGTTCCTTCATTTTTTTCATT
22 TTCTTTCTTTTTTTATGTTTGATTTTTTACTTTTTCACTTTTGAAAACTGCTGAAATTTT
23 CGTAGCAAAAAAAAAAAGACCTTCATTGCTTACTCATCGGTTTCTTATTGGTCAGACGCT
24 CCCCAGGGTCAATTGACAAGGAGAGAAGGAATGTTACATCCAGGAATTGCGACATAAAGA
25 TGTCCAAGAAGTCTGAACTGTCATACGAATGGCTATGCAAGGAGGATAGTACTGGTCAAG
26 AAGACATCTTACCCCCGGTGCTGTCAGGGAGCAAAAAAATGACAAAAGTGGACGCAAAGT
27 TAACTTGAACTACAAGGGTAGCAACAGAATGTCGGTGGTACCGGATGTGACAAAGCTCAC
28 TTGAGGTGCTTCTTGTTGCGGCATAGCAATAAGAGCGCAAGGCGTTTTTATGGAAAGGAG
29 AGCGAGGTTAGAGGGTGACGTTTAGGCGCATAGGCAACCTCCCCTTATTGTTCACCCTTA
30 TTTCCACCCTCAAACGATAAAGCTTGTCTACATTGATGAAAAAAATGTATAAAAGGGATT
31 GAAAAGCCGATCATGTGTGTAGCAATAGTAGTAGTTATACTTGTTCAATTGCTTGCTTGC
32 ACTTTTCCAAAAACTACCAC
33 >MIT_Smik_c193_2483 YDL205C 5' untranslated region, Contig c193 6380 - 8379(revcom), 2000 bp (revcom)
34 AGTACGTGTGTATTTACCAACTATAAAATTTTACCTAGACTATCTGGCCTTTTTCTTTTT
35 TCTATTGTTCTAGATACTAATACGGGATGAAAAGAACAGAATATTCAAAAAGTAATACAG
36 CCCTGTACCATTCAAACACGAGCGCCAATTTGCCAATGAACTTGAAATCCAGCTATGCGT
37 AGCGATAATACAGATGATTGTTTGATGTCGTTTATATTAAGCGTTCCTTCAGTTTTTCTC
38 ATTTTCTTTCTTTTTCTATGTTTTATTTTTCACTTTTTCACTTTTGAAAATTGCTGAAAT
39 TTTCGTAACAAAAAAAGAGGCCTTCATTGCTTACTCATCGTTATCTTATTGGTTAAAATC
40 CCCAGCGACAATGTACAAGGAGAGAAGAAATGATATGTCTGGGAATTGCAGTTTGAAGAT
41 ATCCAAAGAGTTTTGAAGTGCCATACGAGCAACCACGTGAGAAGTAGAGCCTTAACAGAA
42 AATTCATCTTACCCCTAGTACTGCCAGGGAGGAACTAAACCTAAGAACTAGTGTTAACTT
43 GACTTGAACTGCAAGGGTAGCGACGGCGTATGTCGGTGGTACCGGATATGGCAAGAGCCC
44 ATTTGAGCTGCTTGTTCTTGTGACATACTATTAAGAGCGCAAGGCGTTTATGGAAAGGAG
45 GACAAGGTCAGAGGATGACGTTTAAGCGCATAGGCAATCTCCCCTTATTATTCACCCTTA
46 TTTCCACCCTCAAACGATAAAGCTTGCTGCGCTGTTGAAAAGTATATAAAAGGGATAGAA
47 AAGCAGAGCAATTATAATTTAGTAGAATAGCTTATTCTATCGTTAACTTGTTGAAAGGAT
48 CAGATTATTATCAAGATGAA
49 >MIT_Sbay_c841_3215 YDL205C 5' untranslated region, Contig c841 7323 - 9322(revcom), 2000 bp (revcom)
50 AGTATGTGTATATTTACCAACTATAGAGTATATCTAGTATTTTTTTTCCTTCTTCTTTTT
51 CTATTGTTCTAGATGCTAATATGGGATGAGTAGAACAAAATATTCAAAACGCAATACAGC
52 CCTGTACCATTCAAATACGAACGCCAATCTGCCAATGACCTTGAAATCAAGTTATGTGCC
53 GCGATAATACAATCTTTTGGCCTATATCGTTTAAATAAGCGTTCCTTTAATTTTTCGGTT
54 TCTTTCTTTTTTATGTCTAATTTTTCATTTTTTTTCACTTGAAAATTGCTGAAATTTTCG
55 TAGCTGAAAAAGAGAGGCCTTCTTTGCTTACTCATCGTTATCTTATTGGTCAAGAGCCCA
56 AGGGACAATAGACAAGGAGAGAACCACCAACTTTGGGAGTTGGATGCAAAGAAGGTCTTT
57 GATTTTGGGCTGCTATCAGAGCGGGCCATATAAGGAAGCTTGTAGTGGTTAGGAGAGAAC
58 ACGTCATTACCCCCCTCCCCCTTCTCCGCGCTGCCAGGGACCAGGCAAGGGCTTGCAAGA
59 GATGAACGTAAGATAGAACTACGAGGGTCGCGGCCAATGTGTCGGTAGTACCGGATGGGG
60 CAAAGCCCAATTGAGGTGCTTGTTGTTGAGGATGGTCGGCATGGCATGGCATGGGAGGCC
61 AAAGGCGCTTTGTGGGAAGGAGAACAAACAACATTAGAGGGTGACGTTTTAGCGCATAGG
62 CAATCTCCCCTTATTGTTCACCCTTATTTCCACCCTCAAACGACAAGGCTTGTTATGTTG
63 GTTGGAAATATATAAAAGGGATTGAAAAAGATCATATTCCTACATAAATTATGGTATTAG
64 TTTTTCTTCAATTGCTGGCT
65 >WashU_Skud_Contig1850.5 YDL205C 5' untranslated region, Contig c1850 6875 - 8874(revcom), 2000 bp (revcom)
66 GATACGTGTGTATTTGCTAACTATAAAATTTATCTAGTTTTCCTGCTTTTTTTTTTTTCT
67 ATTGTTCTAGAAACTAATATGGGGATGAGAAGAACAAAATTTTCAAAAAGCAATACAGCC
68 CTGTACCATTCAAACACGAACGCCAATCTGCAATGACCTTGAAATCAATCTATGTGTCGC
69 GATAATACAAGTGATTGATTGGTGTCGTTTATATAAAGCGTTCCTTCAATTTTTTCATTT
70 TCTTTCTTTTTTTATGTTTAATTTTCTACCTTTTTCACTTTTGAAAATTGCTGAAATTTT
71 CGTAGCAAAAAAAGAGAGGCGTACGTTGCTTACTCATCGTTTTCTTATTGGTCAAAAGCT
72 CCAGGAACAATGCCCAAGGAGAGAAAGAGTGCTACGTCTAGGAATTGCGATGGAAAGGCG
73 TCCAAGAGTCCTAAACTACCATGAGAACGGGCCACCCAAGGAGGGATAGCAATTGCTGAA
74 ACAACATCTTCACCTTCGGAGCTGGCAGGGAGCAAGGGACTCTCCGGAAAGAAAGTGAAC
75 GCAAAACGGAACTACAAGGATAGCAACGGAATGTGTCGGTGGTAGCGGATGTGGCAAGAT
76 CCCATTTCAGGAGCTTGTTGTTACGGCACAGCAGCAAGAAGAGCACAAGGCTTTTTCCGT
77 AAAGGAGAACAAAGTTGGAAGGTGACGTTTAGGCGCATAGGCAATCTCCCCTTATTGTTC
78 ACCCTTATTTCCACCCTCAAAGGATAAAGCTTGTTGCATTGATAAAAAATGTATAAAAAG
79 GATGGGAAACAGATGATAGTTAACAAGGTAGTGGGACGGTCTTTCGCTTATTCAGTTGTG
80 TGACATTCAAGGGTTACAAT
81 >SGD_Scer_YOR176W HEM15 "Ferrochelatase, a mitochondrial inner membrane protein, catalyzes the insertion of ferrous iron into protoporphyrin IX, the eighth and final step in the heme biosynthetic pathway; Yfh1p mediates the use of iron by Hem15p"
82 TCTTTAAACGTTCTTTTTTTTACTGCTAAATTTGTCCAAATAGCAGGTATGTGTTAAATA
83 TTTCTGTACTTCTTGTAAACCGACTCAAGTGGAACACGAGAATTTACGCTTGTTTGGTGT
84 CAAGCCAAGAGTGACCTTGACCGACCAAAAGTATTCCTTCGCGTCCTCCTTCTTCAATCC
85 CATATCCCCTACGAAAAAAAGCAGCATGAGAAAACGAAGGGCAGCAACTCCTTCGTCATA
86 TAAGGCTTACGGTGACCATTGAAGATTGGGCATGTCTAACGGCTATTGCCAGCGGAGATG
87 TTTCAAGGCATCCTACACATGCTACATATTTGTAATTATTTTACTGAGTTTGTGTATATA
88 AAAAACTTTTTTAAAAAAAAAAAATGGCCAGCATCCTCTTTCATGTAAAGCTGTTGAACC
89 TTCCTGAAATTTACTTCTAAAATTGTTCAGTAAAACTGCTTGTTAAAAGTGCGAAGAGTT
90 CTTTTTTAGCTTTTTTTGTCCTGCTGTTGAGCTGTTTTGCTTTACTGTTCAACAAAACAT
91 TGAAGATCTTTCACATTGCGCGTCGAAACCACAAACCGTCGAAAACAATGGTCATCTAAA
92 TAAAGGGTTCTTATTAAACAGATTTAAAGCCAAGGACAAAATACAGGCACAGGTCAAGCA
93 AGAAGACAAACCGCATACGCCAAGACAAACCGTGGTGATTTAATTCTGCTGCTGATCGCT
94 TCCAACA
95 >MIT_Spar_c278_20970 YOR176W 5' untranslated region, Contig c278 32746 - 34745, 2000 bp (revcom)
96 TCTTCAAACGTTCTTTTCCTACTACTAAGCTTTTCAATAAATAGCGGGTATATGCTAAAT
97 ACTTCTTTGCTTCTTGTACGACCTACTTAATTGAAATACGGATATTTTTGCTTGCTTGGT
98 GCCAAACCAAGAGTGACCTTGACCGACTAAAAGTATTCCTTCGCGTCCTCCTTCTTCAAT
99 CCCATATCCCCTACTGAAAAAAGCAGCGTGCGAAAATGAAGGGCAGCAACTCCTTCGTCA
100 TATAAGGCTTAGGTAATCTTTCAAGGTCAGGTATATCCAGCTGTCGTTACGAGTAGAGAT
101 ATTTCAAGCTGTCCTGCACATGCTACATATTTGTGATTATTTTTATTGAGTTGCGTATAT
102 AAAAAAACAATCTAAAAAAAAAAAAAATGGCCAGCATCTTCTTCCATGTAAAGCTGTTGA
103 ACCTTGCTAAAATCTATTACTATAATTGTTCAGTAAAGTTGCTTGTTAAAAATGCGAAGA
104 GTCTTTTTTAGCTTTTTTTGCCCTGCTGTTGAGCTGTTTTGCTTCACTGTTCAACAAAAC
105 AGTGAAGATCTTTCGAATTGCGCGTCGAAACCACAAACCGTCGAAAATAATGGTCATCTA
106 AATAAAGGGTTCTTATTTGAACAGATTTAAAGCTCAAAGACACGATACAGGCACAGGTCC
107 AGAAAGAATACAAAACGCAAACGCCAAGACAAATTGTGGTAATTTCATTCTGCTGCTGAT
108 CACTGCC
109 >MIT_Smik_c935_20455 YOR176W 5' untranslated region, Contig c935 1803 - 3802(revcom), 2000 bp (revcom)
110 TCTTGAATTGCAATTTTCTACTACTGAAGTTACCAACAATTAGCAAATATGTGATGAGTC
111 CTTTTTACGTTCTTGTATAACCTAAGTTAAATACAAAGGTTTATGCTCCTTTAATGATCA
112 GACCAACAGTGATCTTGGCCGACCAAAAGACTCCTTCGCGTCCTCCTTCTTCAAGTCTCA
113 TATCCCCTACCAGAAAAAGTAGCAGGCGAAAATAAAGAGCAACTGCTCCCCCCCATATAG
114 AGCTTACCATAATTTCTCAAGGAAAGGTATCTCCAGTTGTCGTAAAGAATAAAGAAGTTT
115 CAACGTGTCCTGCATGTTCTACAAATTTGCAATTGACTTTACTAAGTTGCATATATAAAA
116 CTTGTATTAGATAAGTTAGCCAGCATTTTCATTCAAGCTAAGATGTTGAATATGCCAAAG
117 CACATTGCTGAAATTAATCAGTAAAGCTGCTTGCTGAAAGTGGAAATATTTTCAGCTTTT
118 TTTGCTCTGCTGTTGAGCTGTTTTACTTCATTGTTCAACAAAACAATAGAGTTCTCTCCA
119 ATTGCGCGTCAAAACCACAAACCGTCGAAAATAATGATCATCTAAATAAAAGAGTTCACG
120 TTTTCACATATTTAAAGTTGAAATACTCCATACAGGCACAGGTCTAACAAGAAGACAACG
121 CATTCGATAAAACTAATCGTGGTAATTTTTATATCGCTGCTAGCCACTACCAACAATGTA
122 CAATTTT
123 >WashU_Skud_Contig2050.4 YOR176W 5' untranslated region, Contig c2050 12271 - 14270(revcom), 2000 bp (revcom)
124 TCTTAGTTTATAGCTTTTCTACTACTCTGGTCATAAACGAACAGAAGATAAGCAAGAAAT
125 CTTTTTTTCCTTCTTTTACGGTCTATTCAAGTGAAGCACGGGGATTCCCGCTTGTTTAAT
126 AATCAGACCAACAATGATATTGACCGACCAAAAGAAGTATTCCTTCGCGTGCTTCTCCTT
127 TCTGTGTCAAATCCCCTACTGAAAAAGCAGCATTGGGAAAGGAACAGCAGCTTCTCCTTC
128 GTCGCAGAGAGCTCGCGGTAGCATTTCATTGTCAGGTATTTATGATATTTGCTAAGAATA
129 ATTAAAATGTCTTCAGGTCTTGCACATACTCCTACATATTTGTAAGTATTTTACTGATTT
130 GAGTATATAAAAGCCGTACTAAAACTAACCAGCACCTGTAGCAAGGTGCAAAATGTTGAA
131 CCTTTCCGAAATTTATTGCCAGAAACCAAGAGCTAAAAGTGCTTGGTAAAAGTGAAAAGA
132 CTCTTTTTCAGCTGTTTTTTGTTCTGCTGTTGAGCTGTTTTGTTCCATCTGTTCAACAAA
133 ACAGCTTCACTGGATCTTTCAAAGTGCGCGTCGAAACCACAAACCGTCGAAAATATTGAT
134 CATCTAAATAAAGGGTTCTTATTTGCACAGTTTCGCATTGAAATATTCCATTCAGGCACA
135 GATCAACAAGAAGACAAAAAGGTATTCGAGAAGACTAATTGTGGTATTTTTACTTTGCTG
136 CTGACCA
137 >WashU_Sbay_Contig480.2 YOR176W 5' untranslated region, Contig c480 3444 - 5443(revcom), 2000 bp (revcom)
138 TTTCAGGGAAGCACCATGTGCACGAATTGTTCTAGAAAGCATTTTTGGTTCGTAAATTCT
139 CTACAACTGAACTTATTAACAAATAGCAAACAGAGAAGAAAATTTTTTTTTTCCTTCTTG
140 TATGGTCAGTTAGTTGAAAACACGGAGATTTTCACTTGTTTAGTAAGCAGAGCCATAATG
141 CTCTTGACCGACCAAAAGAAGTATTCCTACGCGAGCTCCCTCTTCAAGTGCCAAATCCCC
142 TACTGAAAAAAGCAACATGAGAAGCAAAGAGATGCCTCTCGCCATGCAGGGCTTGCGGTC
143 ATGTTTTCTACGTTCAATTGATTTTGTTACAGCTGAAAGATGTTTATAAAACTGTCTTGC
144 ATATGCTCTATTTACTTGTAAACAATTTTATTAAGTTGCGTATATATGATCGTACTAAAA
145 ATTGGCTGGCGCGTTCTCCAGGCAGAGTTGGTTGAACCTTGCTCGAATTGATAGCTCAAA
146 GTGGAGAGACTCTTTTTTAGCTGTTTTTTGTTCTGCTGTTGAGCTGTTTTGCTCCACCTG
147 TTCAACAAAATGGCAGAGATCTTTCGAAGTGCGCGTCGAAACCACAAACCATCAAAAATA
148 TCGACCATCTAAATAAAGGGTTCTTGTTTGAATAAATATCAGGCGAAGCTCTTCATACAG
149 GCACAGGTCAGATAAGAAGACAATTCGAATTCGAGAAGGATATTCGTGGTATCTTTAATC
150 TGCTGCT