squash waffling test
[bioperl-live.git] / t / data / bug3086.embl
blobe121e201ffd6a609a7ceb078a41fcf5dbecb742c
1 ID   NC_003888; SV 3; linear; unassigned DNA; STD; UNC; 8667507 BP.
2 XX
3 AC   NC_003888;
4 XX
5 DT   03-MAR-2010
6 XX
7 DE   Streptomyces coelicolor A3(2), complete genome.
8 XX
9 KW   complete genome
11 OS   Streptomyces coelicolor A3(2) (2)
12 OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
13 OC   Streptomycineae; Streptomycetaceae; Streptomyces.
15 RN   [1]
16 RP   1-8667507
17 RX   PUBMED; 12000953.
18 RA   Bentley,S.D., Chater,K.F., Cerdeno-Tarraga,A.M., Challis,G.L.,
19 RA   Thomson,N.R., James,K.D., Harris,D.E., Quail,M.A., Kieser,H., Harper,D.,
20 RA   Bateman,A., Brown,S., Chandra,G., Chen,C.W., Collins,M., Cronin,A.,
21 RA   Fraser,A., Goble,A., Hidalgo,J., Hornsby,T., Howarth,S., Huang,C.H.,
22 RA   Kieser,T., Larke,L., Murphy,L., Oliver,K., O'Neil,S., Rabbinowitsch,E.,
23 RA   Rajandream,M.A., Rutherford,K., Rutter,S., Seeger,K., Saunders,D.,
24 RA   Sharp,S., Squares,R., Squares,S., Taylor,K., Warren,T., Wietzorrek,A.,
25 RA   Woodward,J., Barrell,B.G., Parkhill,J. and Hopwood,D.A.;
26 RT   Complete genome sequence of the model actinomycete Streptomyces coelicolor
27 RT   A3(2);
28 RL   Nature 417 (6885), 141-147 (2002)
30 RN   [2]
31 RP   1-8667507
32 RX   PUBMED; 8843436.
33 RA   Redenbach,M., Kieser,H.M., Denapaite,D., Eichner,A., Cullum,J.,
34 RA   Kinashi,H. and Hopwood,D.A.;
35 RT   A set of ordered cosmids and a detailed genetic and physical map for the 8
36 RT   Mb Streptomyces coelicolor A3(2) chromosome;
37 RL   Mol. Microbiol. 21 (1), 77-96 (1996)
39 RN   [3]
40 RP   1-8667507
41 RA   ;
42 RT   Direct Submission;
43 RL   Submitted (28-MAY-2002) National Center for Biotechnology Information,
44 RL   NIH, Bethesda, MD 20894, USA
46 RN   [4]
47 RP   1-8667507
48 RA   Bentley,S.D.;
49 RT   Direct Submission;
50 RL   Submitted (09-MAY-2002) Sanger Institute, Wellcome Trust Genome Campus,
51 RL   Hinxton, Cambridge CB10 1SA, United Kingdom
53 CC   PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI
54 CC   review. The reference sequence was derived from AL645882. On Jun 22, 2003
55 CC   this sequence version replaced gi:31340543. COMPLETENESS: full length.
57 FH   Key             Location/Qualifiers
59 FT   gene            5241975..5243546
60 FT                   /locus_tag="SCO4814"
61 FT                   /db_xref="GeneID:1100255"
62 FT                   /gene_synonym="SCD63A.25"
63 FT                   /gene="purH"
64 FT   CDS             5241975..5243546
65 FT                   /locus_tag="SCO4814"
66 FT                   /gene_synonym="SCD63A.25"
67 FT                   /protein_id="NP_628971.1"
68 FT                   /gene="purH"
69 FT                   /transl_table=11
70 FT                   /note="involved in de novo purine biosynthesis"
71 FT                   /db_xref="GI:21223192"
72 FT                   /db_xref="GeneID:1100255"
73 FT                   /codon_start=1
74 FT                   /translation="MTATAGSNKRAIRRALVSVYDKTGLEDLARGLHEAGVELVSTGST
75 FT                   AGRIAAAGVPVTKVEELTGFPECLDGRVKTLHPKVHAGILADLRLESHRQQLDELGVAP
76 FT                   FDLVVVNLYPFRETVASGATPDECVEQIDIGGPSMVRAAAKNHPSVAVVTSPARYADVL
77 FT                   LAVEGGGFDLAARKRLAAEAFQHTAAYDVAVASWFAAEYAPVDESGFPDFLGATYERAN
78 FT                   TLRYGENPHQPAALYTSPEGGGLAQAEQLHGKEMSYNNYTDTDAARRAAYDHAEPCVAI
79 FT                   IKHANPCGIAIGADVAEAHRKAHDCDPVSAYGGVIAVNRPVSKEMAERVAGIFTEVIVA
80 FT                   PDYEDGALEALTKKKNIRVLRAPAAPAAPVEVKPIDGGALLQVTDRLQAEGDDPATWTL
81 FT                   ATGEALSEAELAELAFAWRACRAVKSNAILLAKDGASVGVGMGQVNRVDSAKLAVERAG
82 FT                   AERAQGAYAASDAFFPFPDGLEILTGAGVKAVVQPGGSVRDELVVEAAKKAGVTMYFTG
83 FT                   TRHFFH"
84 FT                   /product="bifunctional
85 FT                   phosphoribosylaminoimidazolecarboxamide
86 FT                   formyltransferase/IMP cyclohydrolase"
87 FT                   /EC_number="3.5.4.10"
88 FT                   /EC_number="2.1.2.3"
89 FT   misc_feature    5242401..5243345
90 FT                   /locus_tag="SCO4814"
91 FT                   /gene_synonym="SCD63A.25"
92 FT                   /gene="purH"
93 FT                   /note="Pfam match to entry PF01808 AICARFT_IMPCHas,
94 FT                   AICARFT/IMPCHase bienzyme, score 508.80, E-value 4.2e-149"