t/data/HUMBETGLOA.grail

   1
   2 [Start grail2exons_human_1.3] [Seqlen= 3002]
   3
   4 [Start exons]
   5 [Num= 3]
   6
   7 f 1    866     941     848    1051    96.000    excellent
   8 f 2   1088    1314     924    1331   100.000    excellent
   9 f 0   2161    2279    2116    2289    94.000    excellent
  10
  11 [End exons]
  12
  13 [Start exon_translations]
  14 [Num= 3]
  15
  16 [Start translation]
  17
  18 [trans_start= 866]
  19 MVHLTPEEKSAVTALWGKVNVDEVG
  20
  21 [End translation]
  22
  23 [Start translation]
  24
  25 [trans_start= 1086]
  26 RLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLD
  27 NLKGTFATLSELHCDKLHVDPENFRV
  28
  29 [End translation]
  30
  31 [Start translation]
  32
  33 [trans_start= 2161]
  34 LLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAH
  35
  36 [End translation]
  37
  38 [End exon_translations]
  39
  40 [Start clusters forward]
  41 [Num= 3]
  42
  43 [Start cluster] [Num= 7]
  44  1    848    941     87
  45  1    848    957     84
  46  1    866    941     96
  47  1    866    957     88
  48  1    866    919     71
  49  1    866    934     60
  50  1    866   1051     47
  51 [End cluster]
  52
  53 [Start cluster] [Num= 17]
  54  2    930   1331     63
  55  2    930   1310     61
  56  2    930   1275     42
  57  2   1088   1314    100
  58  2   1088   1310    100
  59  2   1088   1289    100
  60  2   1088   1275     96
  61  2   1088   1331     87
  62  2   1088   1263     68
  63  2   1088   1203     60
  64  2   1088   1212     59
  65  2   1088   1196     59
  66  2   1088   1175     52
  67  2   1116   1310     94
  68  2   1161   1310     75
  69  2   1161   1275     53
  70  2   1161   1331     41
  71 [End cluster]
  72
  73 [Start cluster] [Num= 7]
  74  0   2131   2254     80
  75  0   2131   2289     75
  76  0   2161   2279     94
  77  0   2161   2289     93
  78  0   2161   2254     72
  79  0   2161   2247     65
  80  0   2161   2244     62
  81 [End cluster]
  82
  83 [End clusters forward]
  84
  85 [Start clusters reverse]
  86 [Num= 1]
  87
  88 [Start cluster] [Num= 6]
  89  0   1707   1941     79
  90  0   1707   1891     79
  91  0   1707   1921     75
  92  0   1707   1899     74
  93  0   1707   1833     59
  94  0   1707   1855     53
  95 [End cluster]
  96
  97 [End clusters reverse]
  98
  99 [End grail2exons_human_1.3]
 100
 101 [Start DNASequence]
 102 >HUMBETGLOA Human haplotype C4 beta-globin gene, complete cds.
 103 ACCTCCTATTTGACACCACTGATTACCCCATTGATAGTCACACTTTGGGTTGTAAGTGAC
 104 TTTTTATTTATTTGTATTTTTGACTGCATTAAGAGGTCTCTAGTTTTTTACCTCTTGTTT
 105 CCCAAAACCTAATAAGTAACTAATGCACAGAGCACATTGATTTGTATTTATTCTATTTTT
 106 AGACATAATTTATTAGCATGCATGAGCAAATTAAGAAAAACAACAACAAATGAATGCATA
 107 TATATGTATATGTATGTGTGTACATATACACATATATATATATATATATTTTTTCTTTTC
 108 TTACCAGAAGGTTTTAATCCAAATAAGGAGAAGATATGCTTAGAACTGAGGTAGAGTTTT
 109 CATCCATTCTGTCCTGTAAGTATTTTGCATATTCTGGAGACGCAGGAAGAGATCCATCTA
 110 CATATCCCAAAGCTGAATTATGGTAGACAAAACTCTTCCACTTTTAGTGCATCAACTTCT
 111 TATTTGTGTAATAAGAAAATTGGGAAAACGATCTTCAATATGCTTACCAAGCTGTGATTC
 112 CAAATATTACGTAAATACACTTGCAAAGGAGGATGTTTTTAGTAGCAATTTGTACTGATG
 113 GTATGGGGCCAAGAGATATATCTTAGAGGGAGGGCTGAGGGTTTGAAGTCCAACTCCTAA
 114 GCCAGTGCCAGAAGAGCCAAGGACAGGTACGGCTGTCATCACTTAGACCTCACCCTGTGG
 115 AGCCACACCCTAGGGTTGGCCAATCTACTCCCAGGAGCAGGGAGGGCAGGAGCCAGGGCT
 116 GGGCATAAAAGTCAGGGCAGAGCCATCTATTGCTTACATTTGCTTCTGACACAACTGTGT
 117 TCACTAGCAACCTCAAACAGACACCATGGTGCATCTGACTCCTGAGGAGAAGTCTGCCGT
 118 TACTGCCCTGTGGGGCAAGGTGAACGTGGATGAAGTTGGTGGTGAGGCCCTGGGCAGGTT
 119 GGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAAACTGGGCATGTGGAGACAG
 120 AGAAGACTCTTGGGTTTCTGATAGGCACTGACTCTCTCTGCCTATTGGTCTATTTTCCCA
 121 CCCTTAGGCTGCTGGTGGTCTACCCTTGGACCCAGAGGTTCTTTGAGTCCTTTGGGGATC
 122 TGTCCACTCCTGATGCTGTTATGGGCAACCCTAAGGTGAAGGCTCATGGCAAGAAAGTGC
 123 TCGGTGCCTTTAGTGATGGCCTGGCTCACCTGGACAACCTCAAGGGCACCTTTGCCACAC
 124 TGAGTGAGCTGCACTGTGACAAGCTGCACGTGGATCCTGAGAACTTCAGGGTGAGTCTAT
 125 GGGACCCTTGATGTTTTCTTTCCCCTTCTTTTCTATGGTTAAGTTCATGTCATAGGAAGG
 126 GGATAAGTAACAGGGTACAGTTTAGAATGGGAAACAGACGAATGATTGCATCAGTGTGGA
 127 AGTCTCAGGATCGTTTTAGTTTCTTTTATTTGCTGTTCATAACAATTGTTTTCTTTTGTT
 128 TAATTCTTGCTTTCTTTTTTTTTCTTCTCCGCAATTTTTACTATTATACTTAATGCCTTA
 129 ACATTGTGTATAACAAAAGGAAATATCTCTGAGATACATTAAGTAACTTAAAAAAAAACT
 130 TTACACAGTCTGCCTAGTACATTACTATTTGGAATATATGTGTGCTTATTTGCATATTCA
 131 TAATCTCCCTACTTTATTTTCTTTTATTTTTAATTGATACATAATCATTATACATATTTA
 132 TGGGTTAAAGTGTAATGTTTTAATATGTGTACACATATTGACCAAATCAGGGTAATTTTG
 133 CATTTGTAATTTTAAAAAATGCTTTCTTCTTTTAATATACTTTTTTGTTTATCTTATTTC
 134 TAATACTTTCCCTAATCTCTTTCTTTCAGGGCAATAATGATACAATGTATCATGCCTCTT
 135 TGCACCATTCTAAAGAATAACAGTGATAATTTCTGGGTTAAGGCAATAGCAATATCTCTG
 136 CATATAAATATTTCTGCATATAAATTGTAACTGATGTAAGAGGTTTCATATTGCTAATAG
 137 CAGCTACAATCCAGCTACCATTCTGCTTTTATTTTATGGTTGGGATAAGGCTGGATTATT
 138 CTGAGTCCAAGCTAGGCCCTTTTGCTAATCATGTTCATACCTCTTATCTTCCTCCCACAG
 139 CTCCTGGGCAACGTGCTGGTCTGTGTGCTGGCCCATCACTTTGGCAAAGAATTCACCCCA
 140 CCAGTGCAGGCTGCCTATCAGAAAGTGGTGGCTGGTGTGGCTAATGCCCTGGCCCACAAG
 141 TATCACTAAGCTCGCTTTCTTGCTGTCCAATTTCTATTAAAGGTTCCTTTGTTCCCTAAG
 142 TCCAACTACTAAACTGGGGGATATTATGAAGGGCCTTGAGCATCTGGATTCTGCCTAATA
 143 AAAAACATTTATTTTCATTGCAATGATGTATTTAAATTATTTCTGAATATTTTACTAAAA
 144 AGGGAATGTGGGAGGTCAGTGCATTTAAAACATAAAGAAATGAAGAGCTAGTTCAAACCT
 145 TGGGAAAATACACTATATCTTAAACTCCATGAAAGAAGGTGAGGCTGCAAACAGCTAATG
 146 CACATTGGCAACAGCCCTGATGCATATGCCTTATTCATCCCTCAGAAAAGGATTCAAGTA
 147 GAGGCTTGATTTGGAGGTTAAAGTTTTGCTATGCTGTATTTTACATTACTTATTGTTTTA
 148 GCTGTCCTCATGAATGTCTTTTCACTACCCATTTGCTTATCCTGCATCTCTCAGCCTTGA
 149 CTCCACTCAGTTCTCTTGCTTAGAGATACCACCTTTCCCCTGAAGTGTTCCTTCCATGTT
 150 TTACGGCGAGATGGTTTCTCCTCGCCTGGCCACTCAGCCTTAGTTGTCTCTGTTGTCTTA
 151 TAGAGGTCTACTTGAAGAAGGAAAAACAGGGGTCATGGTTTGACTGTCCTGTGAGCCCTT
 152 CTTCCCTGCCTCCCCCACTCACAGTGACCCGGAATCTGCAGTGCTAGTCTCCCGGAACTA
 153 TC
 154
 155 [End DNASequence]
 156
 157