t/data/YP_007988852.gp

   1 LOCUS       YP_007988852             205 aa            linear   CON 22-MAY-2013
   2 DEFINITION  recombinase [Staphylococcus aureus].
   3 ACCESSION   YP_007988852
   4 VERSION     YP_007988852.1  GI:502045014
   5 DBLINK      Project: 178791
   6             BioProject: PRJNA178791
   7 DBSOURCE    REFSEQ: accession NC_021230.1
   8 KEYWORDS    RefSeq.
   9 SOURCE      Staphylococcus aureus
  10   ORGANISM  Staphylococcus aureus
  11             Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.
  12 REFERENCE   1  (residues 1 to 205)
  13   AUTHORS   Mendes,R.E., Deshpande,L.M., Bonilla,H.F., Huband,M.D., Jones,R.N.
  14             and Quinn,J.P.
  15   TITLE     Molecular analysis of cfr-carrying Staphylococcus aureus and
  16             Staphylococcus epidermidis clinical isolates recovered from two
  17             hospitals in Ohio
  18   JOURNAL   Unpublished
  19 REFERENCE   2  (residues 1 to 205)
  20   CONSRTM   NCBI Genome Project
  21   TITLE     Direct Submission
  22   JOURNAL   Submitted (16-MAY-2013) National Center for Biotechnology
  23             Information, NIH, Bethesda, MD 20894, USA
  24 REFERENCE   3  (residues 1 to 205)
  25   AUTHORS   Mendes,R.E., Deshpande,L.M., Bonilla,H.F., Huband,M.D., Jones,R.N.
  26             and Quinn,J.P.
  27   TITLE     Direct Submission
  28   JOURNAL   Submitted (31-JAN-2013) Molecular Studies, JMI Laboratories, 345
  29             Beaver Kreek Centre, North Liberty, IA 52317, USA
  30 COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
  31             NCBI review. The reference sequence is identical to AGL42326.
  32             Method: conceptual translation.
  33 FEATURES             Location/Qualifiers
  34      source          1..205
  35                      /organism="Staphylococcus aureus"
  36                      /strain="1"
  37                      /isolation_source="blood culture"
  38                      /host="Homo sapiens"
  39                      /db_xref="taxon:1280"
  40                      /plasmid="pSA8589"
  41                      /country="USA"
  42      Protein         1..205
  43                      /product="recombinase"
  44                      /calculated_mol_wt=23947
  45      Region          4..>155
  46                      /region_name="PinR"
  47                      /note="Site-specific recombinases, DNA invertase Pin
  48                      homologs [DNA replication, recombination, and repair];
  49                      COG1961"
  50                      /db_xref="CDD:224872"
  51      Region          5..126
  52                      /region_name="SR_ResInv"
  53                      /note="Serine Recombinase (SR) family, Resolvase and
  54                      Invertase subfamily, catalytic domain; members contain a
  55                      C-terminal DNA binding domain. Serine recombinases
  56                      catalyze site-specific recombination of DNA molecules by a
  57                      concerted, four-strand cleavage and...; cd03768"
  58                      /db_xref="CDD:239737"
  59      Site            order(10,12,69..70,73)
  60                      /site_type="active"
  61                      /note="catalytic residues [active]"
  62                      /db_xref="CDD:239737"
  63      Site            12
  64                      /site_type="active"
  65                      /note="catalytic nucleophile [active]"
  66                      /db_xref="CDD:239737"
  67      Site            order(68,121..122,124..125)
  68                      /site_type="other"
  69                      /note="Presynaptic Site I dimer interface [polypeptide
  70                      binding]"
  71                      /db_xref="CDD:239737"
  72      Site            order(74,79..80,117,120..121,124..125)
  73                      /site_type="other"
  74                      /note="Synaptic Antiparallel dimer interface [polypeptide
  75                      binding]"
  76                      /db_xref="CDD:239737"
  77      Site            order(98..100,117..118,121..122,125)
  78                      /site_type="other"
  79                      /note="Synaptic Flat tetramer interface [polypeptide
  80                      binding]"
  81                      /db_xref="CDD:239737"
  82      Site            order(98,122,125)
  83                      /site_type="other"
  84                      /note="Synaptic Site I dimer interface [polypeptide
  85                      binding]"
  86                      /db_xref="CDD:239737"
  87      CDS             1..205
  88                      /locus_tag="D646_p13002"
  89                      /coded_by="NC_021230.1:1774..2391"
  90                      /note="ORF1"
  91                      /transl_table=11
  92                      /db_xref="GeneID:15564138"
  93 CONTIG      join(WP_015639704.1:1..205)
  94 ORIGIN
  95         1 menrkfgyir vsskdqnegr qleamrkigi terdiyldkq sgknferany qllkriirkg
  96        61 dilyihsldr fgrnkeeilq ewndltknie adivvldmpl ldttqykdsm gtfiadlvlq
  97       121 ilswmaeeer erirkrqreg idlalqngiq fgrspvvvsd efkevyrkwk akeltaveam
  98       181 qeagvkktsf yklvkahens ikvns
  99 //
 100