partial fix for arp (-end now works and counts ? as ambigious sequence instead of...
[bioperl-live.git] / t / PhyloNetwork_muVector.t
blob65d64c12afafabff5c88b74e3b647e281377e510
1 # $Id$
2 use strict;
4 BEGIN {
5   use lib 't/lib';
6   use BioperlTest;
8   test_begin(-tests => 8);
10   use_ok('Bio::PhyloNetwork::muVector');
13 my $vec1=Bio::PhyloNetwork::muVector->new(4);
14 my $vec2=Bio::PhyloNetwork::muVector->new([1,2,3,4]);
15 isa_ok($vec1,'Bio::PhyloNetwork::muVector');
16 isa_ok($vec1,'Bio::PhyloNetwork::muVector');
18 my $vec3=-1*$vec2;
19 my $vec4=$vec3+$vec2;
21 is($vec4 cmp $vec1,0,'arithmetic');
22 ok($vec2->display() eq "(1 2 3 4)",'display');
23 ok($vec2->is_positive(),'is_positive');
25 my $vec5=Bio::PhyloNetwork::muVector->new([2,3,5,0,77]);
26 my $vec6=Bio::PhyloNetwork::muVector->new([2,3,4,5,-7]);
28 ok($vec5->geq_poset($vec6) == 0,'geq_poset');
30 my $vec7=Bio::PhyloNetwork::muVector->new([2,3,5,0,77]);
31 my $vec8=Bio::PhyloNetwork::muVector->new([2,3,4,-1,-7]);
33 ok($vec7->geq_poset($vec8),'geq_poset');