t/data/seqxml.xml

   1 <?xml version="1.0"?>
   2 <seqXML source="Ensembl" sourceVersion="56" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="http://www.seqxml.org/0.3/seqxml.xsd" seqXMLversion="0.3">
   3     <entry id="ENST00000308775" source="Ensembl">
   4         <species name="Homo sapiens" ncbiTaxID="9606"/>
   5         <description>dystroglycan 1</description>
   6         <RNAseq>AAGGC----UGAUGUC.....ACAU</RNAseq>
   7         <DBRef type="DNA" source="RefSeq" id="NM_004393"/>
   8         <property name="prediction_method" value="manual curation"/>
   9         <property name="has_splice_variants"/>
  10     </entry>
  11     <entry id="ENSP00000312435" source="Ensembl">
  12         <species name="Homo sapiens" ncbiTaxID="9606"/>
  13         <description>example description.</description>
  14         <AAseq>AAGGCGAAA----AA*AAAAAGT.....CACJOXA</AAseq>
  15     </entry>
  16     <entry id="ENSG00000173402" source="Ensembl">
  17         <species name="Homo sapiens" ncbiTaxID="9606"/>
  18         <description>another example description</description>
  19         <DNAseq>AAGGCGTTAAA----AAAAAAAGT.....CACTA</DNAseq>
  20     </entry>
  21     <entry id="A12345" source="Genbank">
  22         <DNAseq>NNNNACTG--AAATGTGCCCGGG</DNAseq>
  23     </entry>
  24 </seqXML>